RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 RBBP7Q16576 425 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 KIF19Q2TAC6 998 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 ACSBG2Q5FVE4 666 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 DGKKQ5KSL6 1271 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 TCHHL1Q5QJ38 904 aaPredicted RBP13.59□□□□□ -0.23
CLK3-203ENST00000454830 LILRA6Q6PI73 481 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 RNF148Q8N7C7 305 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 OR2AP1Q8NGE2 309 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 ATP6V1E2Q96A05 226 aa13.59□□□□□ -0.23
CLK3-203ENST00000454830 NSUN5Q96P11 429 aaKnown RBP13.59□□□□□ -0.23
CLK3-203ENST00000454830 INTS6Q9UL03 887 aaKnown RBP13.59□□□□□ -0.23
CLK3-203ENST00000454830 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.58□□□□□ -0.23
CLK3-203ENST00000454830 PPP6CO00743 305 aa13.58□□□□□ -0.23
CLK3-203ENST00000454830 GREM1O60565 184 aa13.58□□□□□ -0.23
CLK3-203ENST00000454830 OLFM2O95897 454 aa13.58□□□□□ -0.23
CLK3-203ENST00000454830 PPARGP37231 505 aaPredicted RBP13.58□□□□□ -0.23
CLK3-203ENST00000454830 TRIM68Q6AZZ1 485 aa13.58□□□□□ -0.23
CLK3-203ENST00000454830 Q6ZVU0 165 aa13.58□□□□□ -0.23
CLK3-203ENST00000454830 SERPINA9Q86WD7 417 aa13.58□□□□□ -0.23
CLK3-203ENST00000454830 TCF12Q99081 682 aa13.58□□□□□ -0.23
CLK3-203ENST00000454830 SLC30A3Q99726 388 aa13.58□□□□□ -0.23
CLK3-203ENST00000454830 STOML2Q9UJZ1 356 aa13.58□□□□□ -0.23
CLK3-203ENST00000454830 CORO1CQ9ULV4 474 aaPredicted RBP13.58□□□□□ -0.23
CLK3-203ENST00000454830 MRPS23Q9Y3D9 190 aaKnown RBP13.58□□□□□ -0.23
CLK3-203ENST00000454830 OR51B4Q9Y5P0 310 aa13.58□□□□□ -0.23
CLK3-203ENST00000454830 GUCA1CO95843 209 aa13.58□□□□□ -0.24
CLK3-203ENST00000454830 IMPDH1P20839 514 aa13.58□□□□□ -0.24
CLK3-203ENST00000454830 HNF1BP35680 557 aa13.58□□□□□ -0.24
CLK3-203ENST00000454830 CYLC2Q14093 348 aaPredicted RBP13.58□□□□□ -0.24
CLK3-203ENST00000454830 RPS6KA2Q15349 733 aa13.58□□□□□ -0.24
CLK3-203ENST00000454830 LY6G5CQ5SRR4 150 aa13.58□□□□□ -0.24
CLK3-203ENST00000454830 TSPAN33Q86UF1 283 aa13.58□□□□□ -0.24
CLK3-203ENST00000454830 MYLK4Q86YV6 388 aaPredicted RBP13.58□□□□□ -0.24
CLK3-203ENST00000454830 TTC30BQ8N4P2 665 aa13.58□□□□□ -0.24
CLK3-203ENST00000454830 ZNF366Q8N895 744 aa13.58□□□□□ -0.24
CLK3-203ENST00000454830 EEF1AKMT1Q8WVE0 214 aa13.58□□□□□ -0.24
CLK3-203ENST00000454830 SORCS1Q8WY21 1168 aa13.58□□□□□ -0.24
CLK3-203ENST00000454830 DNMT3BQ9UBC3 853 aaKnown RBP13.58□□□□□ -0.24
CLK3-203ENST00000454830 BTRCQ9Y297 605 aa13.58□□□□□ -0.24
CLK3-203ENST00000454830 THRAP10827 490 aa13.58□□□□□ -0.24
CLK3-203ENST00000454830 ALOX15P16050 662 aaPredicted RBP13.58□□□□□ -0.24
CLK3-203ENST00000454830 XPAP23025 273 aaPredicted RBP13.58□□□□□ -0.24
CLK3-203ENST00000454830 BTKQ06187 659 aa13.58□□□□□ -0.24
CLK3-203ENST00000454830 TBL3Q12788 808 aaKnown RBP13.58□□□□□ -0.24
CLK3-203ENST00000454830 ARMC3Q5W041 872 aa13.58□□□□□ -0.24
CLK3-203ENST00000454830 RIPOR1Q6ZS17 1223 aa13.58□□□□□ -0.24
CLK3-203ENST00000454830 FIBINQ8TAL6 211 aa13.58□□□□□ -0.24
CLK3-203ENST00000454830 PBXIP1Q96AQ6 731 aa13.58□□□□□ -0.24
CLK3-203ENST00000454830 ALG14Q96F25 216 aa13.58□□□□□ -0.24
CLK3-203ENST00000454830 TNFRSF12AQ9NP84 129 aa13.58□□□□□ -0.24
CLK3-203ENST00000454830 LATS2Q9NRM7 1088 aa13.58□□□□□ -0.24
CLK3-203ENST00000454830 CCDC167Q9P0B6 97 aa13.58□□□□□ -0.24
CLK3-203ENST00000454830 IL17CQ9P0M4 197 aa13.58□□□□□ -0.24
CLK3-203ENST00000454830 ANAPC1Q9H1A4 1944 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 GRXCR1A8MXD5 290 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 PRMT5O14744 637 aaPredicted RBP13.57□□□□□ -0.24
CLK3-203ENST00000454830 XYLBO75191 536 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 TYRP14679 529 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 CSRP3P50461 194 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 DNAJB13P59910 316 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 CACNG1Q06432 222 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 PPP1R3AQ16821 1122 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 TYSND1Q2T9J0 566 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 TMEM240Q5SV17 173 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 SCIMPQ6UWF3 145 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 LAYNQ6UX15 382 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 C12orf76Q8N812 135 aaPredicted RBP13.57□□□□□ -0.24
CLK3-203ENST00000454830 SLC26A7Q8TE54 656 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 CYB5D2Q8WUJ1 264 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 EGFL8Q99944 293 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 DCLRE1BQ9H816 532 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 STK39Q9UEW8 545 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 SLC7A8Q9UHI5 535 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 UBDO15205 165 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 GRM6O15303 877 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 CLASP2O75122 1294 aaKnown RBP13.57□□□□□ -0.24
CLK3-203ENST00000454830 TM7SF2O76062 418 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 SRCP12931 536 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 CD1EP15812 388 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 ZNF7P17097 686 aaPredicted RBP13.57□□□□□ -0.24
CLK3-203ENST00000454830 ZNF678Q5SXM1 525 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 GPSM1Q86YR5 675 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 NKAPQ8N5F7 415 aaKnown RBP13.57□□□□□ -0.24
CLK3-203ENST00000454830 RCN3Q96D15 328 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 BOCQ9BWV1 1114 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 CD84Q9UIB8 345 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 MAFFQ9ULX9 164 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 ECI2O75521 394 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 TCN1P20061 433 aaPredicted RBP13.57□□□□□ -0.24
CLK3-203ENST00000454830 MSX2P35548 267 aaPredicted RBP13.57□□□□□ -0.24
CLK3-203ENST00000454830 NNMTP40261 264 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 CCNHP51946 323 aaPredicted RBP13.57□□□□□ -0.24
CLK3-203ENST00000454830 STX1BP61266 288 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 HERVK_113P63132 956 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 SLC5A9Q2M3M2 681 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 AGKQ53H12 422 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 UNC50Q53HI1 259 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 METTL21CQ5VZV1 264 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 FAM91A1Q658Y4 838 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 TMC5Q6UXY8 1006 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms