RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 HCAR2Q8TDS4 363 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 NAT14Q8WUY8 206 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MIB2Q96AX9 1013 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TGM7Q96PF1 710 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CSPG4P5Q96PW8 444 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 NUDCD1Q96RS6 583 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TRIM55Q9BYV6 548 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CEP41Q9BYV8 373 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 HSD3B7Q9H2F3 369 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PRDM8Q9NQV8 689 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SIDT1Q9NXL6 827 aaKnown RBP5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 OGFRQ9NZT2 677 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SCHIP1Q9P0W5 487 aaPredicted RBP5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CNOT8Q9UFF9 292 aaKnown RBP5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ZNHIT2Q9UHR6 403 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 LNPEPQ9UIQ6 1025 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 KCND3Q9UK17 655 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CHKBQ9Y259 395 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 DNAJC16Q9Y2G8 782 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 RPS6KL1Q9Y6S9 549 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CACNA1DQ01668 2161 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CELSR2Q9HCU4 2923 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 C1orf232A0A0U1RR37 186 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CFAP69A5D8W1 941 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 OR52A4PA6NMU1 304 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 F5H423 210 aaPredicted RBP5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 H3BRJ5 948 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PDE2AO00408 941 aaPredicted RBP5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 DNAJC6O75061 913 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SEMA7AO75326 666 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 KATNA1O75449 491 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 RASSF9O75901 435 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 KIAA0754O94854 1291 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CLDN7O95471 211 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 HLA-DQB2P05538 268 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 HOXC4P09017 264 aaPredicted RBP5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CYP2A6P11509 494 aaPredicted RBP5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SFTPCP11686 197 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TCN2P20062 427 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 COL8A1P27658 744 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 GPR3P46089 330 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 FASLGP48023 281 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CSNK1DP48730 415 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 STC1P52823 247 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 EPHB1P54762 984 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 AIF1P55008 147 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 DRG2P55039 364 aaKnown RBP5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 POLR2LP62875 67 aaKnown RBP5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 GPLD1P80108 840 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TRA2AQ13595 282 aaKnown RBP eCLIP5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 IL10RAQ13651 578 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 NADK2Q4G0N4 442 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 KHDC1Q4VXA5 237 aaKnown RBP5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 C4orf17Q53FE4 359 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ERMARDQ5T6L9 678 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PLEKHA7Q6IQ23 1121 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ACAD10Q6JQN1 1059 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TMEM71Q6P5X7 295 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CERS6Q6ZMG9 384 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 FAM92BQ6ZTR7 304 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 B4GALNT4Q76KP1 1039 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ZNF571Q7Z3V5 609 aaPredicted RBP5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 FAM26EQ8N5C1 309 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 AOPEPQ8N6M6 819 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CT55Q8WUE5 264 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 APOBEC4Q8WW27 367 aaKnown RBP5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PIH1D2Q8WWB5 315 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PSMG3-AS1Q96PY0 264 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 WDR24Q96S15 920 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ASPSCR1Q9BZE9 553 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 OR2AG1Q9H205 316 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 RETREG1Q9H6L5 497 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PCDH18Q9HCL0 1135 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TMEM51Q9NW97 253 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TRIM10Q9UDY6 481 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ANAPC2Q9UJX6 822 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CNOT6Q9ULM6 557 aaKnown RBP5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 KCNMB2Q9Y691 235 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SLC30A1Q9Y6M5 507 aa5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MN1Q10571 1320 aaPredicted RBP5.93□□□□□ -1.46
HLA-DPA3-207ENST00000454398 A0A0J9YYE9 177 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TMEM191CA6NGB0 347 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PDZK1P1A8MUH7 402 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 DDX3XO00571 662 aaKnown RBP eCLIP5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 POLR1CO15160 346 aaPredicted RBP5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 AGFG2O95081 481 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TRBC1P01850 177 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TPM2P07951 284 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 RARAP10276 462 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SKILP12757 684 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ZNF8P17098 575 aaPredicted RBP5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 IL4RP24394 825 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 RPL10P27635 214 aaKnown RBP5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CASP14P31944 242 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 HTR7P34969 479 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ARL4AP40617 200 aa5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SSR1P43307 286 aaKnown RBP5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ARCN1P48444 511 aaKnown RBP5.92□□□□□ -1.46
HLA-DPA3-207ENST00000454398 RENBPP51606 427 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms