RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 MLLT3P42568 568 aaPredicted RBP21.54■■□□□ 1.04
C9orf3-208ENST00000451893 PTPRRQ15256 657 aa21.54■■□□□ 1.04
C9orf3-208ENST00000451893 CERCAMQ5T4B2 595 aa21.54■■□□□ 1.04
C9orf3-208ENST00000451893 RFX6Q8HWS3 928 aa21.54■■□□□ 1.04
C9orf3-208ENST00000451893 CCHCR1Q8TD31 782 aa21.54■■□□□ 1.04
C9orf3-208ENST00000451893 HDAC11Q96DB2 347 aa21.54■■□□□ 1.04
C9orf3-208ENST00000451893 LIN37Q96GY3 246 aaPredicted RBP21.54■■□□□ 1.04
C9orf3-208ENST00000451893 MS4A14Q96JA4 679 aa21.54■■□□□ 1.04
C9orf3-208ENST00000451893 TSGA13Q96PP4 275 aa21.54■■□□□ 1.04
C9orf3-208ENST00000451893 TDRD1Q9BXT4 1180 aaKnown RBP21.54■■□□□ 1.04
C9orf3-208ENST00000451893 ASCL3Q9NQ33 180 aa21.54■■□□□ 1.04
C9orf3-208ENST00000451893 TRNAU1APQ9NX07 287 aaKnown RBP21.54■■□□□ 1.04
C9orf3-208ENST00000451893 RNF215Q9Y6U7 377 aa21.54■■□□□ 1.04
C9orf3-208ENST00000451893 CELSR3Q9NYQ7 3312 aa21.54■■□□□ 1.04
C9orf3-208ENST00000451893 LAMA5O15230 3695 aa21.53■■□□□ 1.04
C9orf3-208ENST00000451893 GOLGA6L10A0A0M3HER8 536 aa21.53■■□□□ 1.04
C9orf3-208ENST00000451893 TEX51A0A1B0GUA7 166 aa21.53■■□□□ 1.04
C9orf3-208ENST00000451893 CAPN8A6NHC0 703 aa21.53■■□□□ 1.04
C9orf3-208ENST00000451893 PPP1R12AO14974 1030 aaPredicted RBP21.53■■□□□ 1.04
C9orf3-208ENST00000451893 NUDT21O43809 227 aaKnown RBP21.53■■□□□ 1.04
C9orf3-208ENST00000451893 NOBOXO60393 691 aa21.53■■□□□ 1.04
C9orf3-208ENST00000451893 PYGMP11217 842 aa21.53■■□□□ 1.04
C9orf3-208ENST00000451893 PNLIPP16233 465 aa21.53■■□□□ 1.04
C9orf3-208ENST00000451893 TEAD1P28347 426 aa21.53■■□□□ 1.04
C9orf3-208ENST00000451893 DPTQ07507 201 aa21.53■■□□□ 1.04
C9orf3-208ENST00000451893 LONRF2Q1L5Z9 754 aa21.53■■□□□ 1.04
C9orf3-208ENST00000451893 AMZ1Q400G9 498 aa21.53■■□□□ 1.04
C9orf3-208ENST00000451893 PHF19Q5T6S3 580 aa21.53■■□□□ 1.04
C9orf3-208ENST00000451893 IGF2-ASQ6U949 168 aa21.53■■□□□ 1.04
C9orf3-208ENST00000451893 MARK2Q7KZI7 788 aaKnown RBP21.53■■□□□ 1.04
C9orf3-208ENST00000451893 RAPGEF5Q92565 580 aa21.53■■□□□ 1.04
C9orf3-208ENST00000451893 HIC2Q96JB3 615 aa21.53■■□□□ 1.04
C9orf3-208ENST00000451893 RNF157Q96PX1 679 aa21.53■■□□□ 1.04
C9orf3-208ENST00000451893 OR2M4Q96R27 311 aa21.53■■□□□ 1.04
C9orf3-208ENST00000451893 ADGRE3Q9BY15 652 aa21.53■■□□□ 1.04
C9orf3-208ENST00000451893 FRMD8Q9BZ67 464 aaPredicted RBP21.53■■□□□ 1.04
C9orf3-208ENST00000451893 ABCG8Q9H221 673 aa21.53■■□□□ 1.04
C9orf3-208ENST00000451893 PKD2L2Q9NZM6 624 aa21.53■■□□□ 1.04
C9orf3-208ENST00000451893 TAAR2Q9P1P5 351 aa21.53■■□□□ 1.04
C9orf3-208ENST00000451893 APPL1Q9UKG1 709 aa21.53■■□□□ 1.04
C9orf3-208ENST00000451893 ATXN7L1Q9ULK2 861 aaPredicted RBP21.53■■□□□ 1.04
C9orf3-208ENST00000451893 PPIL1Q9Y3C6 166 aa21.53■■□□□ 1.04
C9orf3-208ENST00000451893 COL27A1Q8IZC6 1860 aaPredicted RBP21.53■■□□□ 1.04
C9orf3-208ENST00000451893 A0A0U1RQS6 177 aa21.52■■□□□ 1.04
C9orf3-208ENST00000451893 C1orf232A0A0U1RR37 186 aa21.52■■□□□ 1.04
C9orf3-208ENST00000451893 CASC3O15234 703 aaKnown RBP21.52■■□□□ 1.04
C9orf3-208ENST00000451893 INPP4BO15327 924 aa21.52■■□□□ 1.04
C9orf3-208ENST00000451893 JCHAINP01591 159 aa21.52■■□□□ 1.04
C9orf3-208ENST00000451893 FGGP02679 453 aa21.52■■□□□ 1.04
C9orf3-208ENST00000451893 CEACAM5P06731 702 aa21.52■■□□□ 1.04
C9orf3-208ENST00000451893 ITGA2BP08514 1039 aa21.52■■□□□ 1.04
C9orf3-208ENST00000451893 ZFXP17010 805 aaPredicted RBP21.52■■□□□ 1.04
C9orf3-208ENST00000451893 AK4P27144 223 aaPredicted RBP21.52■■□□□ 1.04
C9orf3-208ENST00000451893 ALDH4A1P30038 563 aa21.52■■□□□ 1.04
C9orf3-208ENST00000451893 ACTR1BP42025 376 aa21.52■■□□□ 1.04
C9orf3-208ENST00000451893 CD86P42081 329 aa21.52■■□□□ 1.04
C9orf3-208ENST00000451893 MAZP56270 477 aaKnown RBP21.52■■□□□ 1.04
C9orf3-208ENST00000451893 ACTR1AP61163 376 aa21.52■■□□□ 1.04
C9orf3-208ENST00000451893 HLTFQ14527 1009 aaKnown RBP eCLIP21.52■■□□□ 1.04
C9orf3-208ENST00000451893 ARHGAP40Q5TG30 622 aa21.52■■□□□ 1.04
C9orf3-208ENST00000451893 OGFOD3Q6PK18 319 aa21.52■■□□□ 1.04
C9orf3-208ENST00000451893 SPRED1Q7Z699 444 aa21.52■■□□□ 1.04
C9orf3-208ENST00000451893 B3GNT8Q7Z7M8 397 aa21.52■■□□□ 1.04
C9orf3-208ENST00000451893 GALNT13Q8IUC8 556 aa21.52■■□□□ 1.04
C9orf3-208ENST00000451893 PQLC3Q8N755 202 aa21.52■■□□□ 1.04
C9orf3-208ENST00000451893 GPBAR1Q8TDU6 330 aa21.52■■□□□ 1.04
C9orf3-208ENST00000451893 FATE1Q969F0 183 aa21.52■■□□□ 1.04
C9orf3-208ENST00000451893 FAF2Q96CS3 445 aa21.52■■□□□ 1.04
C9orf3-208ENST00000451893 DTLQ9NZJ0 730 aa21.52■■□□□ 1.04
C9orf3-208ENST00000451893 PISDQ9UG56 409 aa21.52■■□□□ 1.04
C9orf3-208ENST00000451893 EFR3BQ9Y2G0 817 aa21.52■■□□□ 1.04
C9orf3-208ENST00000451893 A0A1W2PQM1 296 aa21.51■■□□□ 1.03
C9orf3-208ENST00000451893 KCNK1O00180 336 aa21.51■■□□□ 1.03
C9orf3-208ENST00000451893 FZD6O60353 706 aa21.51■■□□□ 1.03
C9orf3-208ENST00000451893 CLDN7O95471 211 aa21.51■■□□□ 1.03
C9orf3-208ENST00000451893 IVLP07476 585 aa21.51■■□□□ 1.03
C9orf3-208ENST00000451893 PTPN7P35236 360 aa21.51■■□□□ 1.03
C9orf3-208ENST00000451893 POLD2P49005 469 aa21.51■■□□□ 1.03
C9orf3-208ENST00000451893 MARCKSL1P49006 195 aa21.51■■□□□ 1.03
C9orf3-208ENST00000451893 PDX1P52945 283 aa21.51■■□□□ 1.03
C9orf3-208ENST00000451893 RPL26P61254 145 aaKnown RBP21.51■■□□□ 1.03
C9orf3-208ENST00000451893 DYNLT1P63172 113 aa21.51■■□□□ 1.03
C9orf3-208ENST00000451893 PDK1Q15118 436 aa21.51■■□□□ 1.03
C9orf3-208ENST00000451893 ERCC6LQ2NKX8 1250 aa21.51■■□□□ 1.03
C9orf3-208ENST00000451893 TAF1BQ53T94 588 aaPredicted RBP21.51■■□□□ 1.03
C9orf3-208ENST00000451893 TEX35Q5T0J7 233 aa21.51■■□□□ 1.03
C9orf3-208ENST00000451893 ALG1LQ6GMV1 187 aa21.51■■□□□ 1.03
C9orf3-208ENST00000451893 ADAMTSL4Q6UY14 1074 aa21.51■■□□□ 1.03
C9orf3-208ENST00000451893 TECPR1Q7Z6L1 1165 aa21.51■■□□□ 1.03
C9orf3-208ENST00000451893 TRIM74Q86UV6 250 aa21.51■■□□□ 1.03
C9orf3-208ENST00000451893 SLC13A5Q86YT5 568 aaPredicted RBP21.51■■□□□ 1.03
C9orf3-208ENST00000451893 NRSN1Q8IZ57 195 aa21.51■■□□□ 1.03
C9orf3-208ENST00000451893 SCAMP4Q969E2 229 aa21.51■■□□□ 1.03
C9orf3-208ENST00000451893 RUNDC3BQ96NL0 473 aa21.51■■□□□ 1.03
C9orf3-208ENST00000451893 CMKLR1Q99788 373 aa21.51■■□□□ 1.03
C9orf3-208ENST00000451893 MLPHQ9BV36 600 aaPredicted RBP21.51■■□□□ 1.03
C9orf3-208ENST00000451893 HOMER3Q9NSC5 361 aa21.51■■□□□ 1.03
C9orf3-208ENST00000451893 SPATS2LQ9NUQ6 558 aaKnown RBP21.51■■□□□ 1.03
C9orf3-208ENST00000451893 RPL26L1Q9UNX3 145 aaKnown RBP21.51■■□□□ 1.03
C9orf3-208ENST00000451893 TMEM98Q9Y2Y6 226 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms