RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 AGBL5Q8NDL9 886 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 OR4D9Q8NGE8 314 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 SCRN2Q96FV2 425 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 NAP1L5Q96NT1 182 aaPredicted RBP10.08□□□□□ -0.8
LINC01004-202ENST00000450686 TBC1D10AQ9BXI6 508 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 CDH19Q9H159 772 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 SLC25A18Q9H1K4 315 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 GEMIN8Q9NWZ8 242 aaKnown RBP10.08□□□□□ -0.8
LINC01004-202ENST00000450686 DONSONQ9NYP3 566 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 DTLQ9NZJ0 730 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 ZNHIT2Q9UHR6 403 aa10.08□□□□□ -0.8
LINC01004-202ENST00000450686 A0A0J9YYE9 177 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 LRRC10BA6NIK2 292 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 EIF3CLB5ME19 914 aaKnown RBP10.07□□□□□ -0.8
LINC01004-202ENST00000450686 FZD6O60353 706 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 TRBC1P01850 177 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 SLC4A1P02730 911 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 HLA-DQB2P05538 268 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 IL4RP24394 825 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 CD82P27701 267 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 OAS2P29728 719 aaKnown RBP10.07□□□□□ -0.8
LINC01004-202ENST00000450686 PCK1P35558 622 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 HSPA9P38646 679 aaKnown RBP10.07□□□□□ -0.8
LINC01004-202ENST00000450686 GPR3P46089 330 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 STC1P52823 247 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 CDH6P55285 790 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 GUCA2AQ02747 115 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 SLC25A11Q02978 314 aaKnown RBP10.07□□□□□ -0.8
LINC01004-202ENST00000450686 SRSF1Q07955 248 aaKnown RBP eCLIP10.07□□□□□ -0.8
LINC01004-202ENST00000450686 NIPAL4Q0D2K0 466 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 KLHL30Q0D2K2 578 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 KRT81Q14533 505 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 DEFB109BQ30KR1 87 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 MARC1Q5VT66 337 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 SFRP1Q8N474 314 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 LZTR1Q8N653 840 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 LPCAT1Q8NF37 534 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 ZNF564Q8TBZ8 553 aaPredicted RBP10.07□□□□□ -0.8
LINC01004-202ENST00000450686 NCSTNQ92542 709 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 RTP4Q96DX8 246 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 SCARF2Q96GP6 870 aaPredicted RBP10.07□□□□□ -0.8
LINC01004-202ENST00000450686 AHCYL2Q96HN2 611 aaKnown RBP10.07□□□□□ -0.8
LINC01004-202ENST00000450686 WDR24Q96S15 920 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 EIF3CQ99613 913 aaKnown RBP10.07□□□□□ -0.8
LINC01004-202ENST00000450686 SLC38A3Q99624 504 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 THAP2Q9H0W7 228 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 PRDM8Q9NQV8 689 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 PILRAQ9UKJ1 303 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 CNOT6Q9ULM6 557 aaKnown RBP10.07□□□□□ -0.8
LINC01004-202ENST00000450686 PCDHGA3Q9Y5H0 932 aa10.07□□□□□ -0.8
LINC01004-202ENST00000450686 RP1L1Q8IWN7 2480 aaPredicted RBP10.07□□□□□ -0.8
LINC01004-202ENST00000450686 SPTBN1Q01082 2364 aaKnown RBP10.07□□□□□ -0.8
LINC01004-202ENST00000450686 TNRC6AQ8NDV7 1962 aaKnown RBP10.06□□□□□ -0.8
LINC01004-202ENST00000450686 K7EM74 188 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 PSMD11O00231 422 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 DNAJC6O75061 913 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 PRLP01236 227 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 CCDC172P0C7W6 258 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 PIRTP0C851 137 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 ZNF28P17035 718 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 F8A1P23610 371 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 EPHB1P54762 984 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 GFERP55789 205 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 HHEXQ03014 270 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 DPTQ07507 201 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.06□□□□□ -0.8
LINC01004-202ENST00000450686 DCAF12Q5T6F0 453 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 ALS2CLQ60I27 953 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 NCBP2-AS2Q69YL0 99 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 C16orf46Q6P387 395 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 TMEM71Q6P5X7 295 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 B4GALNT4Q76KP1 1039 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 PSTKQ8IV42 348 aaKnown RBP10.06□□□□□ -0.8
LINC01004-202ENST00000450686 NSMCE1Q8WV22 266 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 COX14Q96I36 57 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 ELMO2Q96JJ3 720 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 SPSB2Q99619 263 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 NUP85Q9BW27 656 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 DDA1Q9BW61 102 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 CEP41Q9BYV8 373 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 GPN2Q9H9Y4 310 aaPredicted RBP10.06□□□□□ -0.8
LINC01004-202ENST00000450686 SCHIP1Q9P0W5 487 aaPredicted RBP10.06□□□□□ -0.8
LINC01004-202ENST00000450686 ANAPC7Q9UJX3 599 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 SCINQ9Y6U3 715 aa10.06□□□□□ -0.8
LINC01004-202ENST00000450686 CENPEQ02224 2701 aa10.05□□□□□ -0.8
LINC01004-202ENST00000450686 C1orf232A0A0U1RR37 186 aa10.05□□□□□ -0.8
LINC01004-202ENST00000450686 STK17BO94768 372 aa10.05□□□□□ -0.8
LINC01004-202ENST00000450686 GZMAP12544 262 aa10.05□□□□□ -0.8
LINC01004-202ENST00000450686 TYRP1P17643 537 aa10.05□□□□□ -0.8
LINC01004-202ENST00000450686 TEAD1P28347 426 aa10.05□□□□□ -0.8
LINC01004-202ENST00000450686 PRKCIP41743 596 aa10.05□□□□□ -0.8
LINC01004-202ENST00000450686 CCR10P46092 362 aa10.05□□□□□ -0.8
LINC01004-202ENST00000450686 FASLGP48023 281 aa10.05□□□□□ -0.8
LINC01004-202ENST00000450686 SEPHS1P49903 392 aa10.05□□□□□ -0.8
LINC01004-202ENST00000450686 TAS2R40P59535 323 aa10.05□□□□□ -0.8
LINC01004-202ENST00000450686 SH3BP2P78314 561 aa10.05□□□□□ -0.8
LINC01004-202ENST00000450686 GBE1Q04446 702 aa10.05□□□□□ -0.8
LINC01004-202ENST00000450686 CDC20Q12834 499 aa10.05□□□□□ -0.8
LINC01004-202ENST00000450686 TRA2AQ13595 282 aaKnown RBP eCLIP10.05□□□□□ -0.81e-8■■■■■ 32.6
LINC01004-202ENST00000450686 DPYSL3Q14195 570 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms