RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 RSPH14Q9UHP6 348 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 MOSPD1Q9UJG1 213 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 RAB21Q9UL25 225 aa17■□□□□ 0.31
PRPF40A-204ENST00000450303 UTP11Q9Y3A2 253 aaKnown RBP17■□□□□ 0.31
PRPF40A-204ENST00000450303 FREM2Q5SZK8 3169 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 EME2A4GXA9 379 aaPredicted RBP16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 TTI1O43156 1089 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 PSMD3O43242 534 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 HLA-DQB2P05538 268 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 GP1BAP07359 652 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 CYP2A6P11509 494 aaPredicted RBP16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 ETV3P41162 512 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 PTGIRP43119 386 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 PTK6Q13882 451 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 ELOCQ15369 112 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 PARP6Q2NL67 630 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 CDCP2Q5VXM1 449 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 RFLNAQ6ZTI6 216 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 FSTL5Q8N475 847 aaPredicted RBP16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 OR56A4Q8NGH8 313 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 PIH1D2Q8WWB5 315 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 GLMNQ92990 594 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 NUS1Q96E22 293 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 SCRN2Q96FV2 425 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 DCBLD2Q96PD2 775 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 CEP41Q9BYV8 373 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 NRSN2Q9GZP1 204 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 ACBD3Q9H3P7 528 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 SUDS3Q9H7L9 328 aaPredicted RBP16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 GLOD4Q9HC38 313 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 FGF22Q9HCT0 170 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 ASIC3Q9UHC3 531 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 LHX6Q9UPM6 363 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 CHKBQ9Y259 395 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 GPSM3Q9Y4H4 160 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 CFAP47Q6ZTR5 3102 aa16.99■□□□□ 0.31
PRPF40A-204ENST00000450303 RAD51CO43502 376 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 CSO75390 466 aaKnown RBP16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 ANXA9O76027 345 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 RHOXF2BP0C7M4 288 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 RPL22P35268 128 aaKnown RBP16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 TRIM23P36406 574 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 ADCY8P40145 1251 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 RPIAP49247 311 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 KIAA1024LP59773 190 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 NIPAL4Q0D2K0 466 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 GPS2Q13227 327 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 ARHGEF7Q14155 803 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 ESRP1Q6NXG1 681 aaKnown RBP16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 Q6ZVL8 140 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 PCGF5Q86SE9 256 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 CACTIN-AS1Q8N1I8 211 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 CNTD1Q8N815 330 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 BBOF1Q8ND07 529 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 SPOCK2Q92563 424 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 FCRL5Q96RD9 977 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 RHOXF2Q9BQY4 288 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 SLC25A51Q9H1U9 297 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 GBA3Q9H227 469 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 WDR26Q9H7D7 661 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 CYP4F12Q9HCS2 524 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 NCKIPSDQ9NZQ3 722 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 CD84Q9UIB8 345 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 PADI4Q9UM07 663 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 GPR34Q9UPC5 381 aa16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 AAR2Q9Y312 384 aaKnown RBP16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 DSPP15924 2871 aaKnown RBP16.98■□□□□ 0.31
PRPF40A-204ENST00000450303 E7EVH7 732 aa16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 TLX3O43711 291 aaPredicted RBP16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 FZD6O60353 706 aa16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 ZSCAN5DPP0CG00 497 aa16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 ETS1P14921 441 aa16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 NFKB1P19838 968 aa16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 CA4P22748 312 aa16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 NFKBIAP25963 317 aa16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 TNNT3P45378 269 aaPredicted RBP16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 LMAN1P49257 510 aa16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 EPHB1P54762 984 aa16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 GEMP55040 296 aa16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 GPS1Q13098 491 aa16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 RTP5Q14D33 572 aa16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 TRIP13Q15645 432 aaPredicted RBP16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 COL28A1Q2UY09 1125 aa16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 USP45Q70EL2 814 aa16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 GKN2Q86XP6 184 aa16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 CBARPQ8N350 705 aaPredicted RBP16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 KYQ8NBH2 561 aa16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 NOA1Q8NC60 698 aaKnown RBP16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 ARRDC2Q8TBH0 407 aa16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 SCG3Q8WXD2 468 aaKnown RBP16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 DTD2Q96FN9 168 aa16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 DEPDC7Q96QD5 511 aa16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 MCCC1Q96RQ3 725 aaPredicted RBP16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 LRRC1Q9BTT6 524 aa16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 TMEM168Q9H0V1 697 aa16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 SYNDIG1Q9H7V2 258 aa16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 ANKZF1Q9H8Y5 726 aa16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 COL27A1Q8IZC6 1860 aaPredicted RBP16.97■□□□□ 0.31
PRPF40A-204ENST00000450303 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.96■□□□□ 0.31
PRPF40A-204ENST00000450303 BRINP1O60477 761 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms