RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 BEX2Q9BXY8 128 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 RNF39Q9H2S5 420 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 MROH8Q9H579 483 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 MOSPD1Q9UJG1 213 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 NFASCO94856 1347 aa12.35□□□□□ -0.43
UBE3B-204ENST00000449510 NPEPPSL1A6NEC2 478 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 FUCA1P04066 466 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 TGFB3P10600 412 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 POU2F1P14859 743 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 TCEA1P23193 301 aaKnown RBP12.34□□□□□ -0.43
UBE3B-204ENST00000449510 OR1E1P30953 314 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 RENBPP51606 427 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 TJP1Q07157 1748 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 NIPAL4Q0D2K0 466 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 TUBB3Q13509 450 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 DDR2Q16832 855 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 CNIH3Q8TBE1 160 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 STAG3L4Q8TBR4 150 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 STYXQ8WUJ0 223 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 BIRC7Q96CA5 298 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 ASIC4Q96FT7 647 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 REXO5Q96IC2 774 aaKnown RBP12.34□□□□□ -0.43
UBE3B-204ENST00000449510 RNF38Q9H0F5 515 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 AP5M1Q9H0R1 490 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 RPF2Q9H7B2 306 aaKnown RBP12.34□□□□□ -0.43
UBE3B-204ENST00000449510 IRS2Q9Y4H2 1338 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 SMIM30A4D0T7 59 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 NME4O00746 187 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 BEST1O76090 585 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 CAPN1P07384 714 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 COL6A2P12110 1019 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 IFI30P13284 250 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 APLP1P51693 650 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 CREB5Q02930 508 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 MED22Q15528 200 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 P2RY8Q86VZ1 359 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 HS6ST3Q8IZP7 471 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 CFAP52Q8N1V2 620 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 SMG8Q8ND04 991 aaKnown RBP12.34□□□□□ -0.43
UBE3B-204ENST00000449510 NIFKQ9BYG3 293 aaKnown RBP12.34□□□□□ -0.43
UBE3B-204ENST00000449510 SYTL2Q9HCH5 934 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 LTB4R2Q9NPC1 389 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 INTS7Q9NVH2 962 aaKnown RBP12.34□□□□□ -0.43
UBE3B-204ENST00000449510 SPATA7Q9P0W8 599 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 SAMHD1Q9Y3Z3 626 aaKnown RBP12.34□□□□□ -0.43
UBE3B-204ENST00000449510 TCAF1Q9Y4C2 921 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.34□□□□□ -0.43
UBE3B-204ENST00000449510 PCSK1P29120 753 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 PTPN9P43378 593 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 PPM1FP49593 454 aaPredicted RBP12.34□□□□□ -0.43
UBE3B-204ENST00000449510 NUDT6P53370 316 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 MXD1Q05195 221 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 CACHD1Q5VU97 1274 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 C9orf57Q5W0N0 161 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 THOC7Q6I9Y2 204 aaKnown RBP12.34□□□□□ -0.43
UBE3B-204ENST00000449510 CATSPERGQ6ZRH7 1159 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 ADHFE1Q8IWW8 467 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 AGBL3Q8NEM8 1001 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 SCAMP5Q8TAC9 235 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 AURKBQ96GD4 344 aaPredicted RBP12.34□□□□□ -0.43
UBE3B-204ENST00000449510 GPR22Q99680 433 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 POLG2Q9UHN1 485 aa12.34□□□□□ -0.43
UBE3B-204ENST00000449510 KRBA1A5PL33 1030 aa12.33□□□□□ -0.43
UBE3B-204ENST00000449510 CENPXA8MT69 81 aa12.33□□□□□ -0.43
UBE3B-204ENST00000449510 ARVCFO00192 962 aa12.33□□□□□ -0.43
UBE3B-204ENST00000449510 IQCF3P0C7M6 154 aa12.33□□□□□ -0.43
UBE3B-204ENST00000449510 IDO1P14902 403 aa12.33□□□□□ -0.43
UBE3B-204ENST00000449510 CDH5P33151 784 aaPredicted RBP12.33□□□□□ -0.43
UBE3B-204ENST00000449510 RCVRNP35243 200 aa12.33□□□□□ -0.43
UBE3B-204ENST00000449510 GRM2Q14416 872 aa12.33□□□□□ -0.43
UBE3B-204ENST00000449510 KYAT1Q16773 422 aa12.33□□□□□ -0.43
UBE3B-204ENST00000449510 IGFN1Q86VF2 1251 aa12.33□□□□□ -0.43
UBE3B-204ENST00000449510 KCNS3Q9BQ31 491 aa12.33□□□□□ -0.43
UBE3B-204ENST00000449510 NMRK2Q9NPI5 230 aa12.33□□□□□ -0.43
UBE3B-204ENST00000449510 MAP10Q9P2G4 905 aa12.33□□□□□ -0.43
UBE3B-204ENST00000449510 EIF2B4Q9UI10 523 aaKnown RBP12.33□□□□□ -0.43
UBE3B-204ENST00000449510 FAM32AQ9Y421 112 aaKnown RBP12.33□□□□□ -0.43
UBE3B-204ENST00000449510 SMIM28A0A1B0GU29 152 aa12.33□□□□□ -0.44
UBE3B-204ENST00000449510 BCKDKO14874 412 aa12.33□□□□□ -0.44
UBE3B-204ENST00000449510 NBNO60934 754 aa12.33□□□□□ -0.44
UBE3B-204ENST00000449510 PRKD3O94806 890 aa12.33□□□□□ -0.44
UBE3B-204ENST00000449510 INMTO95050 263 aa12.33□□□□□ -0.44
UBE3B-204ENST00000449510 CYBBP04839 570 aa12.33□□□□□ -0.44
UBE3B-204ENST00000449510 OR4Q2P0C623 313 aa12.33□□□□□ -0.44
UBE3B-204ENST00000449510 COL6A1P12109 1028 aa12.33□□□□□ -0.44
UBE3B-204ENST00000449510 MYCLP1P12525 358 aaPredicted RBP12.33□□□□□ -0.44
UBE3B-204ENST00000449510 EPS8Q12929 822 aa12.33□□□□□ -0.44
UBE3B-204ENST00000449510 ZCCHC8Q6NZY4 707 aaKnown RBP12.33□□□□□ -0.44
UBE3B-204ENST00000449510 SH2D5Q6ZV89 423 aa12.33□□□□□ -0.44
UBE3B-204ENST00000449510 OR56A4Q8NGH8 313 aa12.33□□□□□ -0.44
UBE3B-204ENST00000449510 PCYT2Q99447 389 aa12.33□□□□□ -0.44
UBE3B-204ENST00000449510 VAT1Q99536 393 aa12.33□□□□□ -0.44
UBE3B-204ENST00000449510 DUSP16Q9BY84 665 aa12.33□□□□□ -0.44
UBE3B-204ENST00000449510 LHPPQ9H008 270 aa12.33□□□□□ -0.44
UBE3B-204ENST00000449510 ZNF556Q9HAH1 456 aa12.33□□□□□ -0.44
UBE3B-204ENST00000449510 STYXL1Q9Y6J8 313 aa12.33□□□□□ -0.44
UBE3B-204ENST00000449510 NUP205Q92621 2012 aa12.33□□□□□ -0.44
UBE3B-204ENST00000449510 SLC12A8A0AV02 714 aa12.33□□□□□ -0.44
UBE3B-204ENST00000449510 SOWAHBA6NEL2 793 aa12.33□□□□□ -0.44
UBE3B-204ENST00000449510 IQCF5A8MTL0 148 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms