RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 CCDC134Q9H6E4 229 aa9.63□□□□□ -0.87
RFC4-210ENST00000449502 NMRAL1Q9HBL8 299 aa9.63□□□□□ -0.87
RFC4-210ENST00000449502 POPDC3Q9HBV1 291 aa9.63□□□□□ -0.87
RFC4-210ENST00000449502 SARS2Q9NP81 518 aaKnown RBP9.63□□□□□ -0.87
RFC4-210ENST00000449502 ZDHHC3Q9NYG2 299 aa9.63□□□□□ -0.87
RFC4-210ENST00000449502 CD84Q9UIB8 345 aa9.63□□□□□ -0.87
RFC4-210ENST00000449502 SARDHQ9UL12 918 aa9.63□□□□□ -0.87
RFC4-210ENST00000449502 NCKAP1Q9Y2A7 1128 aa9.63□□□□□ -0.87
RFC4-210ENST00000449502 NOTCH4Q99466 2003 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 NDUFAB1O14561 156 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 MID1O15344 667 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 BIRC5O15392 142 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 RNASEH2AO75792 299 aaKnown RBP9.62□□□□□ -0.87
RFC4-210ENST00000449502 KLHL2O95198 593 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 RBP1P09455 135 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 PRSS56P0CW18 603 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 MYL2P10916 166 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 ACADMP11310 421 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 CPA3P15088 417 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 UGT1A6P19224 532 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 TAC1P20366 129 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 UGT1A1P22309 533 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 UGT1A4P22310 534 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 FDXRP22570 491 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 ALDH3A1P30838 453 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 UGT1A3P35503 534 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 UGT1A5P35504 534 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 MMP12P39900 470 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 SLC26A3P40879 764 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 ETV3P41162 512 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 P2RY2P41231 377 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 SKIV2L2P42285 1042 aaKnown RBP9.62□□□□□ -0.87
RFC4-210ENST00000449502 KIR2DL1P43626 348 aaPredicted RBP9.62□□□□□ -0.87
RFC4-210ENST00000449502 CDKN1CP49918 316 aaPredicted RBP9.62□□□□□ -0.87
RFC4-210ENST00000449502 ADARP55265 1226 aaKnown RBP9.62□□□□□ -0.87
RFC4-210ENST00000449502 DCDC1P59894 354 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 SATB1Q01826 763 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 ASPHQ12797 758 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 RALGDSQ12967 914 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 ENPP2Q13822 863 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 LRRC32Q14392 662 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 CSHL1Q14406 222 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 ZNF460Q14592 562 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 ZKSCAN8Q15776 578 aaPredicted RBP9.62□□□□□ -0.87
RFC4-210ENST00000449502 PDK4Q16654 411 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 TTLL9Q3SXZ7 439 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 HSF5Q4G112 596 aaPredicted RBP9.62□□□□□ -0.87
RFC4-210ENST00000449502 TMEM52BQ4KMG9 183 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.62□□□□□ -0.87
RFC4-210ENST00000449502 LIPIQ6XZB0 460 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 ZNF852Q6ZMS4 543 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 CDHR3Q6ZTQ4 885 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 CACUL1Q86Y37 369 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 RAVER1Q8IY67 606 aaKnown RBP9.62□□□□□ -0.87
RFC4-210ENST00000449502 PIANPQ8IYJ0 282 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 NXPE1Q8N323 547 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 TRAM1L1Q8N609 369 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 ACVR1CQ8NER5 493 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 RDH11Q8TC12 318 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 BCAS4Q8TDM0 211 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 KCTD4Q8WVF5 259 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 AP2M1Q96CW1 435 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 GUCD1Q96NT3 240 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 PANX3Q96QZ0 392 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 OLFM1Q99784 485 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 GABRG3Q99928 467 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 MCMBPQ9BTE3 642 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 ZSCAN5AQ9BUG6 496 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 PITPNM3Q9BZ71 974 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 RABEP2Q9H5N1 569 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 MANSC1Q9H8J5 431 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 SLC2A4RGQ9NR83 387 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 KCTD5Q9NXV2 234 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 FBXL21Q9UKT6 434 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 NDRG2Q9UN36 371 aaKnown RBP9.62□□□□□ -0.87
RFC4-210ENST00000449502 MRPS17Q9Y2R5 130 aaKnown RBP9.62□□□□□ -0.87
RFC4-210ENST00000449502 DOCK4Q8N1I0 1966 aa9.62□□□□□ -0.87
RFC4-210ENST00000449502 NUP205Q92621 2012 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 QSOX1O00391 747 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 PLK4O00444 970 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 TSPAN6O43657 245 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 NARSO43776 548 aaKnown RBP9.61□□□□□ -0.87
RFC4-210ENST00000449502 OR1I1O60431 355 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 PLIN3O60664 434 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 MMP20O60882 483 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 H2AFYO75367 372 aaKnown RBP9.61□□□□□ -0.87
RFC4-210ENST00000449502 PCDH8O95206 1070 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 TRIM16O95361 564 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 BPGMP07738 259 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 OR56A5P0C7T3 313 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 SLC35E2BP0CK96 405 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 CCDC166P0CW27 439 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 BMP1P13497 986 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 RPS3P23396 243 aaKnown RBP eCLIP9.61□□□□□ -0.873e-9■■□□□ 11.4
RFC4-210ENST00000449502 NSG1P42857 185 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 GPR1P46091 355 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 GLRBP48167 497 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 SEC24CP53992 1094 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 PRKAA2P54646 552 aa9.61□□□□□ -0.87
RFC4-210ENST00000449502 CDKN2DP55273 166 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms