RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 MGAT1P26572 445 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 ADSSP30520 456 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 SKOR1P84550 965 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 IL10RBQ08334 325 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 ATXN7L2Q5T6C5 722 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 UNQ6494/PRO21346Q6UXR6 183 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 TMEM173Q86WV6 379 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 CCNJLQ8IV13 435 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 UHMK1Q8TAS1 419 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 SEC14L1Q92503 715 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 SLC22A18Q96BI1 424 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 SLC17A9Q9BYT1 436 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZC3H7BQ9UGR2 993 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 PAIP2BQ9ULR5 123 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 CKAP5Q14008 2032 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 DOPEY2Q9Y3R5 2298 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 A8MUA0 341 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 SUPT3HO75486 399 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 COPS2P61201 443 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 ADGRE1Q14246 886 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 BTLAQ7Z6A9 289 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 UBE2E3Q969T4 207 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 BCAP29Q9UHQ4 241 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 ERI2A8K979 691 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 C5orf67F2Z3F1 127 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 KLRC4-KLRK1H3BQV0 150 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 RNF103O00237 685 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 SIN3BO75182 1162 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 TBX10O75333 385 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 SYNGR4O95473 234 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 HOXC13P31276 330 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 SPRP35270 261 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 DLSTP36957 453 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 SPAM1P38567 509 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 MLLT6P55198 1093 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 BDH1Q02338 343 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZP2Q05996 745 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 SCGB2A2Q13296 93 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZNF234Q14588 700 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 NCEH1Q6PIU2 408 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 Q6ZSR6 202 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 ASZ1Q8WWH4 475 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 C12orf66Q96MD2 445 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 OR2M4Q96R27 311 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 PRPF18Q99633 342 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 N6AMT1Q9Y5N5 214 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 NINQ8N4C6 2090 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 DLG5Q8TDM6 1919 aa5.61□□□□□ -1.51
CDC42BPA-209ENST00000448940 GLYATL1P3A0A0U1RQE8 302 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 SNAP91O60641 907 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 NOL3O60936 208 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 POU1F1P28069 291 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 CCKBRP32239 447 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 NRG3P56975 720 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 RACK1P63244 317 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 PRKG2Q13237 762 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 DHX34Q14147 1143 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 CRY1Q16526 586 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 HSP90AA5PQ58FG0 334 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 PAGE2BQ5JRK9 111 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 FAM136AQ96C01 138 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 TBCDQ9BTW9 1192 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 ACAT2Q9BWD1 397 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZNF717Q9BY31 904 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 CEP41Q9BYV8 373 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 IL21RQ9HBE5 538 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 TAS2R14Q9NYV8 317 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 CIB4A0PJX0 185 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 TRABD2BA6NFA1 517 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 SOWAHDA6NJG2 315 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 GSTA4O15217 222 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 RGS16O15492 202 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 EDN1P05305 212 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 TPOP07202 933 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 RARAP10276 462 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 OTUD4Q01804 1114 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 PDIA2Q13087 525 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 ITGADQ13349 1161 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 HIF1AQ16665 826 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 MMEL1Q495T6 779 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 PTPN20Q4JDL3 420 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 FLYWCH1Q4VC44 716 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 TRIM42Q8IWZ5 723 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 EPS8L1Q8TE68 723 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 RILPQ96NA2 401 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 CSPG4P5Q96PW8 444 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 AP1M1Q9BXS5 423 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 NUF2Q9BZD4 464 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.6□□□□□ -1.512e-7■■□□□ 12.9
CDC42BPA-209ENST00000448940 DOCK9Q9BZ29 2069 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 H3BNH8 94 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 NOL4O94818 638 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 NDST3O95803 873 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 SP9P0CG40 484 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 ANXA11P50995 505 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 POU4F1Q01851 419 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 GSTA3Q16772 222 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 HNRNPA1L2Q32P51 320 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 SYCE2Q6PIF2 218 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms