RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 ING5Q8WYH8 240 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 ECHDC3Q96DC8 303 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 ZSWIM3Q96MP5 696 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 TRMOQ9BU70 441 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 LINC00597Q9H2U6 94 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 POMKQ9H5K3 350 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 TFB2MQ9H5Q4 396 aaKnown RBP10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 ZNF395Q9H8N7 513 aaPredicted RBP10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 EML4Q9HC35 981 aaKnown RBP10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 DUS2Q9NX74 493 aaKnown RBP10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 OBP2AQ9NY56 170 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 LNPEPQ9UIQ6 1025 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 MSRAQ9UJ68 235 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 HAO1Q9UJM8 370 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 ERVW-1Q9UQF0 538 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 WNT6Q9Y6F9 365 aa10.52□□□□□ -0.73
VIPAS39-203ENST00000448935 H3BMM5 538 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 FCHO1O14526 889 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 HOXC11O43248 304 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 NFATC1O95644 943 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 SRPRAP08240 638 aaKnown RBP10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 ALPIP09923 528 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 TPBGLP0DKB5 382 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 CD1DP15813 335 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 ZNF7P17097 686 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 CALB2P22676 271 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 FMO4P31512 558 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 CTSOP43234 321 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 NRIP1P48552 1158 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 DGKGP49619 791 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 STK19P49842 368 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 RPL14P50914 215 aaKnown RBP10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 XIAPP98170 497 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 NFKB2Q00653 900 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 GALNT1Q10472 559 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 DHCR24Q15392 516 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 METTL21CQ5VZV1 264 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 PSAPL1Q6NUJ1 521 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 NAPRTQ6XQN6 538 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 ASRGL1Q7L266 308 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 TAS2R42Q7RTR8 314 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 SNX20Q7Z614 316 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 RAB44Q7Z6P3 723 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 ADGRD2Q7Z7M1 963 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 ADIPOR2Q86V24 386 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 BPIFB1Q8TDL5 484 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 KCNJ9Q92806 393 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 ASIC4Q96FT7 647 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 SCRN2Q96FV2 425 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 NSL1Q96IY1 281 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 FAR2Q96K12 515 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 ASB2Q96Q27 587 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 TMEM237Q96Q45 408 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 DERL2Q9GZP9 239 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 LRMDAQ9H2I8 198 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 BPIFA1Q9NP55 256 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 TRMT6Q9UJA5 497 aaKnown RBP10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 FBXO10Q9UK96 956 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 TMCO1Q9UM00 188 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 MYOFQ9NZM1 2061 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 SYCE1LA8MT33 242 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 E5RI56 91 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 PRMT5O14744 637 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 HDAC3O15379 428 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 ADH5P11766 374 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 NQO1P15559 274 aaKnown RBP10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 RPS3P23396 243 aaKnown RBP eCLIP10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 FSHRP23945 695 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 HNF1BP35680 557 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 SPAM1P38567 509 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 MAGEA10P43363 369 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 PGGT1BP53609 377 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 CBX2Q14781 532 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 ARL13AQ5H913 290 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 SEL1L3Q68CR1 1132 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 FAM109BQ6ICB4 259 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 BRAT1Q6PJG6 821 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 TMC5Q6UXY8 1006 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 GDPD4Q6W3E5 623 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 TRIM67Q6ZTA4 783 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 ISCA2Q86U28 154 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 RBFAQ8N0V3 343 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 SPATA6LQ8N4H0 392 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 CCNYL1Q8N7R7 359 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 ZNF781Q8N8C0 355 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 ITFG1Q8TB96 612 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 STAG3L4Q8TBR4 150 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 HCAR2Q8TDS4 363 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 ANKRD49Q8WVL7 239 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 LRIG1Q96JA1 1093 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 HEPHQ9BQS7 1158 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 OSBPL1AQ9BXW6 950 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 ZDHHC6Q9H6R6 413 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 ARHGEF3Q9NR81 526 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 MRGBPQ9NV56 204 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 PNPOQ9NVS9 261 aa10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 THG1LQ9NWX6 298 aaKnown RBP10.51□□□□□ -0.73
VIPAS39-203ENST00000448935 GDE1Q9NZC3 331 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms