RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 MAGEE2Q8TD90 523 aaPredicted RBP13.6□□□□□ -0.23
POLR1B-209ENST00000448770 BLOC1S5Q8TDH9 187 aa13.6□□□□□ -0.23
POLR1B-209ENST00000448770 SEPT8Q92599 483 aa13.6□□□□□ -0.23
POLR1B-209ENST00000448770 SLC10A4Q96EP9 437 aa13.6□□□□□ -0.23
POLR1B-209ENST00000448770 ACOX2Q99424 681 aa13.6□□□□□ -0.23
POLR1B-209ENST00000448770 DOK1Q99704 481 aa13.6□□□□□ -0.23
POLR1B-209ENST00000448770 C1orf50Q9BV19 199 aa13.6□□□□□ -0.23
POLR1B-209ENST00000448770 HIPK3Q9H422 1215 aa13.6□□□□□ -0.23
POLR1B-209ENST00000448770 ALG2Q9H553 416 aa13.6□□□□□ -0.23
POLR1B-209ENST00000448770 FAF1Q9UNN5 650 aaPredicted RBP13.6□□□□□ -0.23
POLR1B-209ENST00000448770 LOC285095A0A1B0GVY8 99 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 WASH4PA8MWX3 477 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 B4GALT3O60512 393 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 C1RP00736 705 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 INHBBP09529 407 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 PRR35P0CG20 571 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 ODC1P11926 461 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 LBPP18428 481 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 ELK4P28324 431 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 OR4D2P58180 307 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 ACVR1Q04771 509 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 BNIP2Q12982 314 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 MARC1Q5VT66 337 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 USP51Q70EK9 711 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 BEND5Q7L4P6 421 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 UMODL1-AS1Q8N2C9 162 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 C9orf16Q9BUW7 83 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 CDC7O00311 574 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 CD3EAPO15446 510 aaKnown RBP13.59□□□□□ -0.23
POLR1B-209ENST00000448770 TBX18O95935 607 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 CHRNA1P02708 482 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 TCF3P15923 654 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 IL10P22301 178 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 DCKP27707 260 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 SHMT2P34897 504 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 SLC26A3P40879 764 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 PSMD7P51665 324 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 CLCQ05315 142 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 NFYCQ13952 458 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 RCAN2Q14206 197 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 SELPLGQ14242 412 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 TSNQ15631 228 aaKnown RBP13.59□□□□□ -0.23
POLR1B-209ENST00000448770 NEDD8Q15843 81 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 MS4A13Q5J8X5 152 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 PAQR3Q6TCH7 311 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 KCTD8Q6ZWB6 473 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 SYVN1Q86TM6 617 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 KLHDC9Q8NEP7 349 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 TNIP2Q8NFZ5 429 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 SLC39A13Q96H72 371 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 SEPHS2Q99611 448 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 PTPN18Q99952 460 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 NTN4Q9HB63 628 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 PLGRKTQ9HBL7 147 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 FAIMQ9NVQ4 179 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 RNF181Q9P0P0 153 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 PTBP2Q9UKA9 531 aaKnown RBP13.59□□□□□ -0.23
POLR1B-209ENST00000448770 FAM50BQ9Y247 325 aa13.59□□□□□ -0.23
POLR1B-209ENST00000448770 NCF1BA6NI72 391 aaPredicted RBP13.58□□□□□ -0.23
POLR1B-209ENST00000448770 NCF1CA8MVU1 366 aaPredicted RBP13.58□□□□□ -0.23
POLR1B-209ENST00000448770 STAMBPO95630 424 aa13.58□□□□□ -0.23
POLR1B-209ENST00000448770 CYP11A1P05108 521 aa13.58□□□□□ -0.23
POLR1B-209ENST00000448770 NCF1P14598 390 aaPredicted RBP13.58□□□□□ -0.23
POLR1B-209ENST00000448770 MATN1P21941 496 aa13.58□□□□□ -0.23
POLR1B-209ENST00000448770 ACVRL1P37023 503 aa13.58□□□□□ -0.23
POLR1B-209ENST00000448770 CAPGP40121 348 aa13.58□□□□□ -0.23
POLR1B-209ENST00000448770 RENBPP51606 427 aa13.58□□□□□ -0.23
POLR1B-209ENST00000448770 MLLT10P55197 1068 aa13.58□□□□□ -0.23
POLR1B-209ENST00000448770 NUP107P57740 925 aa13.58□□□□□ -0.23
POLR1B-209ENST00000448770 ADARB1P78563 741 aaKnown RBP13.58□□□□□ -0.23
POLR1B-209ENST00000448770 MRPS6P82932 125 aaKnown RBP13.58□□□□□ -0.23
POLR1B-209ENST00000448770 BNIP3Q12983 259 aa13.58□□□□□ -0.23
POLR1B-209ENST00000448770 PRMT9Q6P2P2 845 aa13.58□□□□□ -0.23
POLR1B-209ENST00000448770 PTRH1Q86Y79 214 aaKnown RBP13.58□□□□□ -0.23
POLR1B-209ENST00000448770 TEX26Q8N6G2 289 aa13.58□□□□□ -0.23
POLR1B-209ENST00000448770 SMYD1Q8NB12 490 aa13.58□□□□□ -0.23
POLR1B-209ENST00000448770 ZNF408Q9H9D4 720 aa13.58□□□□□ -0.23
POLR1B-209ENST00000448770 AIG1Q9NVV5 245 aa13.58□□□□□ -0.23
POLR1B-209ENST00000448770 CHCHD3Q9NX63 227 aaKnown RBP13.58□□□□□ -0.23
POLR1B-209ENST00000448770 SMPD3Q9NY59 655 aaPredicted RBP13.58□□□□□ -0.23
POLR1B-209ENST00000448770 NEUROG3Q9Y4Z2 214 aa13.58□□□□□ -0.23
POLR1B-209ENST00000448770 A0A1W2PP18 115 aa13.58□□□□□ -0.24
POLR1B-209ENST00000448770 TRIM64BA6NI03 449 aa13.58□□□□□ -0.24
POLR1B-209ENST00000448770 SUPT3HB4E1H0 165 aa13.58□□□□□ -0.24
POLR1B-209ENST00000448770 UPK1AO00322 258 aa13.58□□□□□ -0.24
POLR1B-209ENST00000448770 SUPT3HO75486 399 aa13.58□□□□□ -0.24
POLR1B-209ENST00000448770 ECI2O75521 394 aa13.58□□□□□ -0.24
POLR1B-209ENST00000448770 GRIK1P39086 918 aa13.58□□□□□ -0.24
POLR1B-209ENST00000448770 RPS9P46781 194 aaKnown RBP13.58□□□□□ -0.24
POLR1B-209ENST00000448770 CDKN1CP49918 316 aaPredicted RBP13.58□□□□□ -0.24
POLR1B-209ENST00000448770 ZIK1Q3SY52 487 aaPredicted RBP13.58□□□□□ -0.24
POLR1B-209ENST00000448770 TIGD2Q4W5G0 525 aa13.58□□□□□ -0.24
POLR1B-209ENST00000448770 TMTC4Q5T4D3 741 aa13.58□□□□□ -0.24
POLR1B-209ENST00000448770 TMEM214Q6NUQ4 689 aaKnown RBP13.58□□□□□ -0.24
POLR1B-209ENST00000448770 PATL1Q86TB9 770 aaKnown RBP13.58□□□□□ -0.24
POLR1B-209ENST00000448770 TRIM74Q86UV6 250 aa13.58□□□□□ -0.24
POLR1B-209ENST00000448770 TRIM73Q86UV7 250 aa13.58□□□□□ -0.24
POLR1B-209ENST00000448770 GTF3C2Q8WUA4 911 aaPredicted RBP13.58□□□□□ -0.24
POLR1B-209ENST00000448770 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.58□□□□□ -0.242e-6■■■■■ 27.5
POLR1B-209ENST00000448770 KCTD14Q9BQ13 255 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms