RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 ALS2CLQ60I27 953 aa24.89■■□□□ 1.58
HTATSF1-203ENST00000448450 ZCCHC8Q6NZY4 707 aaKnown RBP24.89■■□□□ 1.58
HTATSF1-203ENST00000448450 ADAMTSL4Q6UY14 1074 aa24.89■■□□□ 1.58
HTATSF1-203ENST00000448450 TMC3Q7Z5M5 1100 aa24.89■■□□□ 1.58
HTATSF1-203ENST00000448450 SLC13A5Q86YT5 568 aaPredicted RBP24.89■■□□□ 1.58
HTATSF1-203ENST00000448450 SPACA3Q8IXA5 215 aa24.89■■□□□ 1.58
HTATSF1-203ENST00000448450 FAM181AQ8N9Y4 354 aa24.89■■□□□ 1.58
HTATSF1-203ENST00000448450 PTCD2Q8WV60 388 aaKnown RBP24.89■■□□□ 1.58
HTATSF1-203ENST00000448450 UBE2Q2Q8WVN8 375 aa24.89■■□□□ 1.58
HTATSF1-203ENST00000448450 ATG4AQ8WYN0 398 aa24.89■■□□□ 1.58
HTATSF1-203ENST00000448450 ANP32BQ92688 251 aaKnown RBP24.89■■□□□ 1.58
HTATSF1-203ENST00000448450 SPATA13Q96N96 652 aa24.89■■□□□ 1.58
HTATSF1-203ENST00000448450 GORASP1Q9BQQ3 440 aa24.89■■□□□ 1.58
HTATSF1-203ENST00000448450 FICDQ9BVA6 458 aa24.89■■□□□ 1.58
HTATSF1-203ENST00000448450 TMEM168Q9H0V1 697 aa24.89■■□□□ 1.58
HTATSF1-203ENST00000448450 CARS2Q9HA77 564 aaKnown RBP24.89■■□□□ 1.58
HTATSF1-203ENST00000448450 PRSS38A1L453 326 aa24.88■■□□□ 1.57
HTATSF1-203ENST00000448450 ANXA9O76027 345 aa24.88■■□□□ 1.57
HTATSF1-203ENST00000448450 EPOP01588 193 aa24.88■■□□□ 1.57
HTATSF1-203ENST00000448450 FUCA1P04066 466 aa24.88■■□□□ 1.57
HTATSF1-203ENST00000448450 CKMT1AP12532 417 aa24.88■■□□□ 1.57
HTATSF1-203ENST00000448450 CXADRP78310 365 aa24.88■■□□□ 1.57
HTATSF1-203ENST00000448450 PRPSAP1Q14558 356 aa24.88■■□□□ 1.57
HTATSF1-203ENST00000448450 SLC1A5Q15758 541 aa24.88■■□□□ 1.57
HTATSF1-203ENST00000448450 TRIM58Q8NG06 486 aa24.88■■□□□ 1.57
HTATSF1-203ENST00000448450 SLC35B2Q8TB61 432 aa24.88■■□□□ 1.57
HTATSF1-203ENST00000448450 HIC2Q96JB3 615 aa24.88■■□□□ 1.57
HTATSF1-203ENST00000448450 FSD1LQ9BXM9 530 aa24.88■■□□□ 1.57
HTATSF1-203ENST00000448450 FRMD8Q9BZ67 464 aaPredicted RBP24.88■■□□□ 1.57
HTATSF1-203ENST00000448450 BPIFA1Q9NP55 256 aa24.88■■□□□ 1.57
HTATSF1-203ENST00000448450 GULP1Q9UBP9 304 aa24.88■■□□□ 1.57
HTATSF1-203ENST00000448450 LY6G6EA0A0G2JKS1 128 aa24.87■■□□□ 1.57
HTATSF1-203ENST00000448450 RGSL1A5PLK6 1076 aa24.87■■□□□ 1.57
HTATSF1-203ENST00000448450 PYGLP06737 847 aa24.87■■□□□ 1.57
HTATSF1-203ENST00000448450 GNPDA1P46926 289 aa24.87■■□□□ 1.57
HTATSF1-203ENST00000448450 OLIG2Q13516 323 aa24.87■■□□□ 1.57
HTATSF1-203ENST00000448450 TAF8Q7Z7C8 310 aa24.87■■□□□ 1.57
HTATSF1-203ENST00000448450 GKN2Q86XP6 184 aa24.87■■□□□ 1.57
HTATSF1-203ENST00000448450 RAVER1Q8IY67 606 aaKnown RBP24.87■■□□□ 1.57
HTATSF1-203ENST00000448450 GPR26Q8NDV2 337 aa24.87■■□□□ 1.57
HTATSF1-203ENST00000448450 ZNF248Q8NDW4 579 aa24.87■■□□□ 1.57
HTATSF1-203ENST00000448450 C1orf54Q8WWF1 131 aa24.87■■□□□ 1.57
HTATSF1-203ENST00000448450 SCG3Q8WXD2 468 aaKnown RBP24.87■■□□□ 1.57
HTATSF1-203ENST00000448450 APOL2Q9BQE5 337 aa24.87■■□□□ 1.57
HTATSF1-203ENST00000448450 TMEM121Q9BTD3 319 aa24.87■■□□□ 1.57
HTATSF1-203ENST00000448450 SIRPGQ9P1W8 387 aa24.87■■□□□ 1.57
HTATSF1-203ENST00000448450 SUFUQ9UMX1 484 aa24.87■■□□□ 1.57
HTATSF1-203ENST00000448450 U3KQA8 63 aa24.87■■□□□ 1.57
HTATSF1-203ENST00000448450 CPED1A4D0V7 1026 aa24.86■■□□□ 1.57
HTATSF1-203ENST00000448450 C5orf60A6NFR6 353 aa24.86■■□□□ 1.57
HTATSF1-203ENST00000448450 FADS2P1A8MWK0 482 aa24.86■■□□□ 1.57
HTATSF1-203ENST00000448450 ASMTLO95671 621 aa24.86■■□□□ 1.57
HTATSF1-203ENST00000448450 HLA-DPA1P20036 260 aa24.86■■□□□ 1.57
HTATSF1-203ENST00000448450 DUSP3P51452 185 aaPredicted RBP24.86■■□□□ 1.57
HTATSF1-203ENST00000448450 GDF10P55107 478 aa24.86■■□□□ 1.57
HTATSF1-203ENST00000448450 PCBP4P57723 403 aaKnown RBP24.86■■□□□ 1.57
HTATSF1-203ENST00000448450 C6orf132Q5T0Z8 1188 aa24.86■■□□□ 1.57
HTATSF1-203ENST00000448450 HENMT1Q5T8I9 393 aaKnown RBP24.86■■□□□ 1.57
HTATSF1-203ENST00000448450 ARHGEF18Q6ZSZ5 1173 aa24.86■■□□□ 1.57
HTATSF1-203ENST00000448450 MARK2Q7KZI7 788 aaKnown RBP24.86■■□□□ 1.57
HTATSF1-203ENST00000448450 ZNF605Q86T29 641 aa24.86■■□□□ 1.57
HTATSF1-203ENST00000448450 CCL4L1Q8NHW4 92 aa24.86■■□□□ 1.57
HTATSF1-203ENST00000448450 BLOC1S5Q8TDH9 187 aa24.86■■□□□ 1.57
HTATSF1-203ENST00000448450 SRPK1Q96SB4 655 aaKnown RBP24.86■■□□□ 1.57
HTATSF1-203ENST00000448450 BOCQ9BWV1 1114 aa24.86■■□□□ 1.57
HTATSF1-203ENST00000448450 SPATA16Q9BXB7 569 aa24.86■■□□□ 1.57
HTATSF1-203ENST00000448450 TLR10Q9BXR5 811 aa24.86■■□□□ 1.57
HTATSF1-203ENST00000448450 CARD9Q9H257 536 aa24.86■■□□□ 1.57
HTATSF1-203ENST00000448450 KCNF1Q9H3M0 494 aa24.86■■□□□ 1.57
HTATSF1-203ENST00000448450 CNOT6Q9ULM6 557 aaKnown RBP24.86■■□□□ 1.57
HTATSF1-203ENST00000448450 GPR34Q9UPC5 381 aa24.86■■□□□ 1.57
HTATSF1-203ENST00000448450 AAR2Q9Y312 384 aaKnown RBP24.86■■□□□ 1.57
HTATSF1-203ENST00000448450 ATP1A1P05023 1023 aaKnown RBP24.85■■□□□ 1.57
HTATSF1-203ENST00000448450 SNX1Q13596 522 aa24.85■■□□□ 1.57
HTATSF1-203ENST00000448450 SPARCL1Q14515 664 aa24.85■■□□□ 1.57
HTATSF1-203ENST00000448450 NR0B2Q15466 257 aa24.85■■□□□ 1.57
HTATSF1-203ENST00000448450 SLC35F3Q8IY50 421 aa24.85■■□□□ 1.57
HTATSF1-203ENST00000448450 ZNF843Q8N446 348 aa24.85■■□□□ 1.57
HTATSF1-203ENST00000448450 TAB3Q8N5C8 712 aaPredicted RBP24.85■■□□□ 1.57
HTATSF1-203ENST00000448450 ZNF578Q96N58 590 aaPredicted RBP24.85■■□□□ 1.57
HTATSF1-203ENST00000448450 DEPDC7Q96QD5 511 aa24.85■■□□□ 1.57
HTATSF1-203ENST00000448450 SLC17A4Q9Y2C5 497 aa24.85■■□□□ 1.57
HTATSF1-203ENST00000448450 PCDHB1Q9Y5F3 818 aa24.85■■□□□ 1.57
HTATSF1-203ENST00000448450 BUD23O43709 281 aaKnown RBP24.84■■□□□ 1.57
HTATSF1-203ENST00000448450 ZNF189O75820 626 aaPredicted RBP24.84■■□□□ 1.57
HTATSF1-203ENST00000448450 FGF1P05230 155 aa24.84■■□□□ 1.57
HTATSF1-203ENST00000448450 PLA2G2AP14555 144 aa24.84■■□□□ 1.57
HTATSF1-203ENST00000448450 BPIP17213 487 aa24.84■■□□□ 1.57
HTATSF1-203ENST00000448450 BROXQ5VW32 411 aa24.84■■□□□ 1.57
HTATSF1-203ENST00000448450 GUSBP11Q6P575 273 aa24.84■■□□□ 1.57
HTATSF1-203ENST00000448450 LVRNQ6Q4G3 990 aa24.84■■□□□ 1.57
HTATSF1-203ENST00000448450 LSMEM2Q8N112 164 aa24.84■■□□□ 1.57
HTATSF1-203ENST00000448450 TTC30BQ8N4P2 665 aa24.84■■□□□ 1.57
HTATSF1-203ENST00000448450 FAM46DQ8NEK8 389 aa24.84■■□□□ 1.57
HTATSF1-203ENST00000448450 GLMNQ92990 594 aa24.84■■□□□ 1.57
HTATSF1-203ENST00000448450 COX14Q96I36 57 aa24.84■■□□□ 1.57
HTATSF1-203ENST00000448450 ARFGAP3Q9NP61 516 aa24.84■■□□□ 1.57
HTATSF1-203ENST00000448450 RAD18Q9NS91 495 aa24.84■■□□□ 1.57
HTATSF1-203ENST00000448450 EVA1BQ9NVM1 165 aa24.84■■□□□ 1.57
HTATSF1-203ENST00000448450 OAS3Q9Y6K5 1087 aaKnown RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms