RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 KCTD3Q9Y597 815 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 ARL5AQ9Y689 179 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 AKAP13Q12802 2813 aa14.71□□□□□ -0.05
HDAC4-204ENST00000446876 MTX2O75431 263 aa14.71□□□□□ -0.05
HDAC4-204ENST00000446876 ZNF189O75820 626 aaPredicted RBP14.71□□□□□ -0.05
HDAC4-204ENST00000446876 CA5AP35218 305 aa14.71□□□□□ -0.05
HDAC4-204ENST00000446876 HMGCLP35914 325 aa14.71□□□□□ -0.05
HDAC4-204ENST00000446876 ADCY8P40145 1251 aa14.71□□□□□ -0.05
HDAC4-204ENST00000446876 DUSP3P51452 185 aaPredicted RBP14.71□□□□□ -0.05
HDAC4-204ENST00000446876 INSM1Q01101 510 aaPredicted RBP14.71□□□□□ -0.05
HDAC4-204ENST00000446876 CTBSQ01459 385 aa14.71□□□□□ -0.05
HDAC4-204ENST00000446876 PARP6Q2NL67 630 aa14.71□□□□□ -0.05
HDAC4-204ENST00000446876 KCTD11Q693B1 232 aa14.71□□□□□ -0.05
HDAC4-204ENST00000446876 SLC30A9Q6PML9 568 aa14.71□□□□□ -0.05
HDAC4-204ENST00000446876 FAM151BQ6UXP7 276 aa14.71□□□□□ -0.05
HDAC4-204ENST00000446876 MICALCLQ6ZW33 695 aa14.71□□□□□ -0.05
HDAC4-204ENST00000446876 PDCD7Q8N8D1 485 aaKnown RBP14.71□□□□□ -0.05
HDAC4-204ENST00000446876 ARL10Q8N8L6 244 aa14.71□□□□□ -0.05
HDAC4-204ENST00000446876 GPBAR1Q8TDU6 330 aa14.71□□□□□ -0.05
HDAC4-204ENST00000446876 SCG3Q8WXD2 468 aaKnown RBP14.71□□□□□ -0.05
HDAC4-204ENST00000446876 RTP4Q96DX8 246 aa14.71□□□□□ -0.05
HDAC4-204ENST00000446876 SCARF2Q96GP6 870 aaPredicted RBP14.71□□□□□ -0.05
HDAC4-204ENST00000446876 ZSCAN5AQ9BUG6 496 aa14.71□□□□□ -0.05
HDAC4-204ENST00000446876 TMEM121BQ9BXQ6 578 aaPredicted RBP14.71□□□□□ -0.05
HDAC4-204ENST00000446876 FRMD8P1Q9BZ68 369 aaPredicted RBP14.71□□□□□ -0.05
HDAC4-204ENST00000446876 TRABDQ9H4I3 376 aa14.71□□□□□ -0.05
HDAC4-204ENST00000446876 RAD18Q9NS91 495 aa14.71□□□□□ -0.05
HDAC4-204ENST00000446876 SPATS2LQ9NUQ6 558 aaKnown RBP14.71□□□□□ -0.05
HDAC4-204ENST00000446876 PIH1D1Q9NWS0 290 aaKnown RBP14.71□□□□□ -0.05
HDAC4-204ENST00000446876 IL17CQ9P0M4 197 aa14.71□□□□□ -0.05
HDAC4-204ENST00000446876 TMPRSS11EQ9UL52 423 aa14.71□□□□□ -0.05
HDAC4-204ENST00000446876 PYCARDQ9ULZ3 195 aa14.71□□□□□ -0.05
HDAC4-204ENST00000446876 MSRB2Q9Y3D2 182 aa14.71□□□□□ -0.05
HDAC4-204ENST00000446876 EME2A4GXA9 379 aaPredicted RBP14.7□□□□□ -0.06
HDAC4-204ENST00000446876 ZSCAN12O43309 604 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 NOBOXO60393 691 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 DNAJC6O75061 913 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 ZSCAN5DPP0CG00 497 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 SPAM1P38567 509 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 ILF3Q12906 894 aaKnown RBP eCLIP14.7□□□□□ -0.06
HDAC4-204ENST00000446876 ILKQ13418 452 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 MSLNQ13421 630 aaPredicted RBP14.7□□□□□ -0.06
HDAC4-204ENST00000446876 CHRNA6Q15825 494 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 LONRF2Q1L5Z9 754 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 P3H1Q32P28 736 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 ATP13A5Q4VNC0 1218 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 KHDC1Q4VXA5 237 aaKnown RBP14.7□□□□□ -0.06
HDAC4-204ENST00000446876 PYCR3Q53H96 274 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 LVRNQ6Q4G3 990 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 CCNI2Q6ZMN8 369 aaPredicted RBP14.7□□□□□ -0.06
HDAC4-204ENST00000446876 GALNT13Q8IUC8 556 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 GATA6Q92908 595 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 GLMNQ92990 594 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 GLYATL1Q969I3 302 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 MS4A14Q96JA4 679 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 PLEKHG4BQ96PX9 1271 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 GSDMCQ9BYG8 508 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 CDH19Q9H159 772 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 OR2AG1Q9H205 316 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 DPEP2Q9H4A9 486 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 IL26Q9NPH9 171 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 TRNAU1APQ9NX07 287 aaKnown RBP14.7□□□□□ -0.06
HDAC4-204ENST00000446876 SMARCAL1Q9NZC9 954 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 TAAR2Q9P1P5 351 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 ATXN10Q9UBB4 475 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 ZNHIT2Q9UHR6 403 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 RABGEF1Q9UJ41 708 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 PADI4Q9UM07 663 aa14.7□□□□□ -0.06
HDAC4-204ENST00000446876 CHD8Q9HCK8 2581 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 FAM221BA6H8Z2 402 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 GAPDHSO14556 408 aaPredicted RBP14.69□□□□□ -0.06
HDAC4-204ENST00000446876 OPA1O60313 960 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 UGT1A9O60656 530 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 SLC25A14O95258 325 aaPredicted RBP14.69□□□□□ -0.06
HDAC4-204ENST00000446876 ZNF8P17098 575 aaPredicted RBP14.69□□□□□ -0.06
HDAC4-204ENST00000446876 TPH1P17752 444 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 UGT1A6P19224 532 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 UGT1A1P22309 533 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 UGT1A4P22310 534 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 UGT1A3P35503 534 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 UGT1A5P35504 534 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 ACTR1BP42025 376 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 KCNJ1P48048 391 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 RPIAP49247 311 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 MAZP56270 477 aaKnown RBP14.69□□□□□ -0.06
HDAC4-204ENST00000446876 ACTR1AP61163 376 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 GSE1Q14687 1217 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 CCNG2Q16589 344 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 UNQ6494/PRO21346Q6UXR6 183 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 GALNT15Q8N3T1 639 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 SDR16C5Q8N3Y7 309 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 GPR156Q8NFN8 814 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 OR4K2Q8NGD2 314 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 OR13C4Q8NGS5 318 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 MAPK15Q8TD08 544 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 PATE1Q8WXA2 126 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 CCDC74AQ96AQ1 378 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 PPP1R2P1Q96PQ5 205 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 LRRC40Q9H9A6 602 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 UGT1A7Q9HAW7 530 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms