RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 PTGER3P43115 390 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 CSNK1DP48730 415 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 CDH13P55290 713 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 RPL26P61254 145 aaKnown RBP13.6□□□□□ -0.23
RBM39-216ENST00000444878 XIAPP98170 497 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 CACNG1Q06432 222 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 PPIGQ13427 754 aaKnown RBP eCLIP13.6□□□□□ -0.231e-15■□□□□ 11.3
RBM39-216ENST00000444878 CYLC2Q14093 348 aaPredicted RBP13.6□□□□□ -0.23
RBM39-216ENST00000444878 CTSL3PQ5NE16 218 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 STK40Q8N2I9 435 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 EID2BQ96D98 161 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 RPL10LQ96L21 214 aaKnown RBP13.6□□□□□ -0.23
RBM39-216ENST00000444878 LBHD1Q9BQE6 289 aaPredicted RBP13.6□□□□□ -0.23
RBM39-216ENST00000444878 TNKS2Q9H2K2 1166 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 ATP13A3Q9H7F0 1226 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 MEAF6Q9HAF1 191 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 ZFYVE1Q9HBF4 777 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 ZBTB26Q9HCK0 441 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 CXXC1Q9P0U4 656 aaPredicted RBP13.6□□□□□ -0.23
RBM39-216ENST00000444878 STOML1Q9UBI4 398 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 INTS6Q9UL03 887 aaKnown RBP13.6□□□□□ -0.23
RBM39-216ENST00000444878 IRAK3Q9Y616 596 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 A0A0J9YYE9 177 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 C1orf232A0A0U1RR37 186 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 SYCE1LA8MT33 242 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 AIM2O14862 343 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 HTRA2O43464 458 aaPredicted RBP13.6□□□□□ -0.23
RBM39-216ENST00000444878 SOCS5O75159 536 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 TRBC1P01850 177 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 ESR1P03372 595 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 GKP32189 559 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 CCR2P41597 374 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 PTDSS1P48651 473 aaKnown RBP13.6□□□□□ -0.23
RBM39-216ENST00000444878 CCNG1P51959 295 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 SESN3P58005 492 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 C1QTNF8P60827 252 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 ACTR3P61158 418 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 SIDT2Q8NBJ9 832 aaKnown RBP13.6□□□□□ -0.23
RBM39-216ENST00000444878 GALPQ9UBC7 116 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 CDH22Q9UJ99 828 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 CCL26Q9Y258 94 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 COPG1Q9Y678 874 aaKnown RBP13.6□□□□□ -0.23
RBM39-216ENST00000444878 COMMD10Q9Y6G5 202 aa13.6□□□□□ -0.23
RBM39-216ENST00000444878 ZNF106Q9H2Y7 1883 aaKnown RBP13.59□□□□□ -0.23
RBM39-216ENST00000444878 GPR39O43194 453 aa13.59□□□□□ -0.23
RBM39-216ENST00000444878 CD1EP15812 388 aa13.59□□□□□ -0.23
RBM39-216ENST00000444878 CD9P21926 228 aa13.59□□□□□ -0.23
RBM39-216ENST00000444878 CTNNB1P35222 781 aa13.59□□□□□ -0.23
RBM39-216ENST00000444878 NUDT2P50583 147 aa13.59□□□□□ -0.23
RBM39-216ENST00000444878 GTF2A1P52655 376 aaPredicted RBP13.59□□□□□ -0.23
RBM39-216ENST00000444878 ADARP55265 1226 aaKnown RBP13.59□□□□□ -0.23
RBM39-216ENST00000444878 TBL3Q12788 808 aaKnown RBP13.59□□□□□ -0.23
RBM39-216ENST00000444878 TSNQ15631 228 aaKnown RBP13.59□□□□□ -0.23
RBM39-216ENST00000444878 GEN1Q17RS7 908 aa13.59□□□□□ -0.23
RBM39-216ENST00000444878 CLEC6AQ6EIG7 209 aa13.59□□□□□ -0.23
RBM39-216ENST00000444878 ARMCX6Q7L4S7 300 aa13.59□□□□□ -0.23
RBM39-216ENST00000444878 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.59□□□□□ -0.236e-6■■■□□ 15.3
RBM39-216ENST00000444878 FBXO39Q8N4B4 442 aa13.59□□□□□ -0.23
RBM39-216ENST00000444878 MRPL43Q8N983 215 aaKnown RBP13.59□□□□□ -0.23
RBM39-216ENST00000444878 DTX3LQ8TDB6 740 aa13.59□□□□□ -0.23
RBM39-216ENST00000444878 KCNJ9Q92806 393 aa13.59□□□□□ -0.23
RBM39-216ENST00000444878 SLC30A3Q99726 388 aa13.59□□□□□ -0.23
RBM39-216ENST00000444878 SARS2Q9NP81 518 aaKnown RBP13.59□□□□□ -0.23
RBM39-216ENST00000444878 MRGBPQ9NV56 204 aa13.59□□□□□ -0.23
RBM39-216ENST00000444878 PRKAG2Q9UGJ0 569 aa13.59□□□□□ -0.23
RBM39-216ENST00000444878 NOTCH4Q99466 2003 aa13.58□□□□□ -0.23
RBM39-216ENST00000444878 CCDC189A1A4V9 331 aa13.58□□□□□ -0.23
RBM39-216ENST00000444878 CDC7O00311 574 aa13.58□□□□□ -0.23
RBM39-216ENST00000444878 BTN3A1O00481 513 aa13.58□□□□□ -0.23
RBM39-216ENST00000444878 CCNT2O60583 730 aaKnown RBP13.58□□□□□ -0.23
RBM39-216ENST00000444878 ZNF821O75541 412 aaPredicted RBP13.58□□□□□ -0.23
RBM39-216ENST00000444878 RFPL2O75678 378 aa13.58□□□□□ -0.23
RBM39-216ENST00000444878 PRAMEF1O95521 474 aa13.58□□□□□ -0.23
RBM39-216ENST00000444878 SERPINA4P29622 427 aa13.58□□□□□ -0.23
RBM39-216ENST00000444878 INHBCP55103 352 aa13.58□□□□□ -0.23
RBM39-216ENST00000444878 IL2P60568 153 aa13.58□□□□□ -0.23
RBM39-216ENST00000444878 SNRPD1P62314 119 aaKnown RBP13.58□□□□□ -0.23
RBM39-216ENST00000444878 HERC3Q15034 1050 aa13.58□□□□□ -0.23
RBM39-216ENST00000444878 PITRM1Q5JRX3 1037 aa13.58□□□□□ -0.23
RBM39-216ENST00000444878 DGKKQ5KSL6 1271 aa13.58□□□□□ -0.23
RBM39-216ENST00000444878 UGT3A1Q6NUS8 523 aa13.58□□□□□ -0.23
RBM39-216ENST00000444878 FAM151BQ6UXP7 276 aa13.58□□□□□ -0.23
RBM39-216ENST00000444878 CERS6Q6ZMG9 384 aa13.58□□□□□ -0.23
RBM39-216ENST00000444878 CLYBLQ8N0X4 340 aa13.58□□□□□ -0.23
RBM39-216ENST00000444878 KYQ8NBH2 561 aa13.58□□□□□ -0.23
RBM39-216ENST00000444878 OR2AP1Q8NGE2 309 aa13.58□□□□□ -0.23
RBM39-216ENST00000444878 SHKBP1Q8TBC3 707 aa13.58□□□□□ -0.23
RBM39-216ENST00000444878 CD200R1Q8TD46 325 aa13.58□□□□□ -0.23
RBM39-216ENST00000444878 TCEAL4Q96EI5 215 aa13.58□□□□□ -0.23
RBM39-216ENST00000444878 RAD9AQ99638 391 aa13.58□□□□□ -0.23
RBM39-216ENST00000444878 TMEM106CQ9BVX2 250 aa13.58□□□□□ -0.23
RBM39-216ENST00000444878 MID1IP1Q9NPA3 183 aa13.58□□□□□ -0.23
RBM39-216ENST00000444878 STX18Q9P2W9 335 aaKnown RBP13.58□□□□□ -0.23
RBM39-216ENST00000444878 NPEPPSL1A6NEC2 478 aa13.58□□□□□ -0.24
RBM39-216ENST00000444878 PRMT5O14744 637 aaPredicted RBP13.58□□□□□ -0.24
RBM39-216ENST00000444878 UBDO15205 165 aa13.58□□□□□ -0.24
RBM39-216ENST00000444878 CLASP2O75122 1294 aaKnown RBP13.58□□□□□ -0.24
RBM39-216ENST00000444878 TBX10O75333 385 aa13.58□□□□□ -0.24
RBM39-216ENST00000444878 GPC4O75487 556 aa13.58□□□□□ -0.24
RBM39-216ENST00000444878 ECI2O75521 394 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms