RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 CBARPQ8N350 705 aaPredicted RBP16.64■□□□□ 0.25
TSPAN9-204ENST00000444315 TTC13Q8NBP0 860 aa16.64■□□□□ 0.25
TSPAN9-204ENST00000444315 CCDC112Q8NEF3 446 aa16.64■□□□□ 0.25
TSPAN9-204ENST00000444315 GPBAR1Q8TDU6 330 aa16.64■□□□□ 0.25
TSPAN9-204ENST00000444315 HNRNPLLQ8WVV9 542 aaKnown RBP16.64■□□□□ 0.25
TSPAN9-204ENST00000444315 ATXN7L3BQ96GX2 97 aa16.64■□□□□ 0.25
TSPAN9-204ENST00000444315 TTC25Q96NG3 672 aa16.64■□□□□ 0.25
TSPAN9-204ENST00000444315 TRIB3Q96RU7 358 aa16.64■□□□□ 0.25
TSPAN9-204ENST00000444315 LRRN3Q9H3W5 708 aa16.64■□□□□ 0.25
TSPAN9-204ENST00000444315 EFR3BQ9Y2G0 817 aa16.64■□□□□ 0.25
TSPAN9-204ENST00000444315 PKP3Q9Y446 797 aa16.64■□□□□ 0.25
TSPAN9-204ENST00000444315 PRKAB1Q9Y478 270 aa16.64■□□□□ 0.25
TSPAN9-204ENST00000444315 RNF215Q9Y6U7 377 aa16.64■□□□□ 0.25
TSPAN9-204ENST00000444315 ASXL3Q9C0F0 2248 aa16.64■□□□□ 0.25
TSPAN9-204ENST00000444315 SOD1P00441 154 aa16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 PYGMP11217 842 aa16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 ACP5P13686 325 aa16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 HLA-DPA1P20036 260 aa16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 CD68P34810 354 aaPredicted RBP16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 PTPN7P35236 360 aa16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 LRP8Q14114 963 aa16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 INSCQ1MX18 579 aa16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 SIRPB2Q5JXA9 342 aa16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 CERCAMQ5T4B2 595 aa16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 HENMT1Q5T8I9 393 aaKnown RBP16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 AADACL2Q6P093 401 aa16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 NLRP8Q86W28 1048 aa16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 TMEM139Q8IV31 216 aa16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 LSMEM2Q8N112 164 aa16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 GPR156Q8NFN8 814 aa16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 PPP1R2P1Q96PQ5 205 aa16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 ALS2CR12Q96Q35 445 aa16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 FCRL5Q96RD9 977 aa16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 OR2AG1Q9H205 316 aa16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 GBA3Q9H227 469 aa16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 TRABDQ9H4I3 376 aa16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 POLR1BQ9H9Y6 1135 aa16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 SPATS2LQ9NUQ6 558 aaKnown RBP16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 HACD3Q9P035 362 aa16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 AKAP7Q9P0M2 348 aaPredicted RBP16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 SATB2Q9UPW6 733 aa16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 AAR2Q9Y312 384 aaKnown RBP16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 ZFC3H1O60293 1989 aaKnown RBP16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 ARHGEF17Q96PE2 2063 aaPredicted RBP16.63■□□□□ 0.25
TSPAN9-204ENST00000444315 TRBV23OR9-2A0A075B6M9 112 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 FADS2P1A8MWK0 482 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 TMX2-CTNND1H3BSU7 103 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 ECEL1O95672 775 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 FGF1P05230 155 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 INHBCP55103 352 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 RTP5Q14D33 572 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 PLA2G4EQ3MJ16 856 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 PHF19Q5T6S3 580 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 CRTC3Q6UUV7 619 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 JAMLQ86YT9 394 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 TRAM1L1Q8N609 369 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 LRRC57Q8N9N7 239 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 GPR26Q8NDV2 337 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 PTCD2Q8WV60 388 aaKnown RBP16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 ALG3Q92685 438 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 GRAMD1AQ96CP6 724 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 AHCYL2Q96HN2 611 aaKnown RBP16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 NAF1Q96HR8 494 aaKnown RBP16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 COX14Q96I36 57 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 TMEM74Q96NL1 305 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 FOXP3Q9BZS1 431 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 RMI1Q9H9A7 625 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 THSD1Q9NS62 852 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 VPS18Q9P253 973 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 DKK4Q9UBT3 224 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 LHX6Q9UPM6 363 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 KCNK6Q9Y257 313 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 PLEKHM1Q9Y4G2 1056 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 ACACAQ13085 2346 aa16.62■□□□□ 0.25
TSPAN9-204ENST00000444315 CCDC187A0A096LP49 1063 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 D6RAR5 112 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 TAF4O00268 1085 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 ARHGAP6O43182 974 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 GRID2O43424 1007 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 NUDT21O43809 227 aaKnown RBP16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 NOBOXO60393 691 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 SLC2A4P14672 509 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 PSMB4P28070 264 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 SPAM1P38567 509 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 CHRNA4P43681 627 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 ABCG1P45844 678 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 DCDC1P59894 354 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 CCDC173Q0VFZ6 552 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 HLTFQ14527 1009 aaKnown RBP eCLIP16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 SLC1A5Q15758 541 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 PYCR3Q53H96 274 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 ANKRD20A2Q5SQ80 823 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 ZNF648Q5T619 568 aaPredicted RBP16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 ANKRD20A1Q5TYW2 823 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 ANKRD20A3Q5VUR7 823 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 ZDHHC20Q5W0Z9 365 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 PDPK2PQ6A1A2 396 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 KDELC1Q6UW63 502 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 TMC3Q7Z5M5 1100 aa16.61■□□□□ 0.25
TSPAN9-204ENST00000444315 SFTPA2Q8IWL1 248 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms