RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 SNRNP25Q9BV90 132 aaKnown RBP14.26□□□□□ -0.13
HMGN1-208ENST00000443046 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.26□□□□□ -0.13
HMGN1-208ENST00000443046 UCK1Q9HA47 277 aa14.26□□□□□ -0.13
HMGN1-208ENST00000443046 MLXIPLQ9NP71 852 aa14.26□□□□□ -0.13
HMGN1-208ENST00000443046 NLRC4Q9NPP4 1024 aa14.26□□□□□ -0.13
HMGN1-208ENST00000443046 OGFRQ9NZT2 677 aa14.26□□□□□ -0.13
HMGN1-208ENST00000443046 VPS18Q9P253 973 aa14.26□□□□□ -0.13
HMGN1-208ENST00000443046 DACH1Q9UI36 760 aa14.26□□□□□ -0.13
HMGN1-208ENST00000443046 KCND3Q9UK17 655 aa14.26□□□□□ -0.13
HMGN1-208ENST00000443046 CNOT6Q9ULM6 557 aaKnown RBP14.26□□□□□ -0.13
HMGN1-208ENST00000443046 MAP4K5Q9Y4K4 846 aa14.26□□□□□ -0.13
HMGN1-208ENST00000443046 KIR2DS5A0A0G2JLQ3 304 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 A0A0G2JNG1 304 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 LILRA5A6NI73 299 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 TTLL8A6PVC2 850 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 KIR2DS3K7RE56 304 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 TOX3O15405 576 aaPredicted RBP14.25□□□□□ -0.13
HMGN1-208ENST00000443046 CREG1O75629 220 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 SORBS2O94875 1100 aaKnown RBP14.25□□□□□ -0.13
HMGN1-208ENST00000443046 PYGLP06737 847 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 PDHA1P08559 390 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 GFERP55789 205 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 UBE2IP63279 158 aaKnown RBP14.25□□□□□ -0.13
HMGN1-208ENST00000443046 SEMA5AQ13591 1074 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 ZNF235Q14590 738 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 IL11RAQ14626 422 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 KIR2DS5Q14953 304 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 DPCR1Q3MIW9 517 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 LRRC66Q68CR7 880 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 DCUN1D2Q6PH85 259 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 USP45Q70EL2 814 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 PLXDC1Q8IUK5 500 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 PSTKQ8IV42 348 aaKnown RBP14.25□□□□□ -0.13
HMGN1-208ENST00000443046 RAVER1Q8IY67 606 aaKnown RBP14.25□□□□□ -0.13
HMGN1-208ENST00000443046 MCOLN2Q8IZK6 566 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 GALNT6Q8NCL4 622 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 EXD1Q8NHP7 514 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 SMIM14Q96QK8 99 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 HERPUD2Q9BSE4 406 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 TBC1D10AQ9BXI6 508 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 FAM207AQ9NSI2 230 aaPredicted RBP14.25□□□□□ -0.13
HMGN1-208ENST00000443046 CWC15Q9P013 229 aaKnown RBP14.25□□□□□ -0.13
HMGN1-208ENST00000443046 KLHL3Q9UH77 587 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 ZNHIT2Q9UHR6 403 aa14.25□□□□□ -0.13
HMGN1-208ENST00000443046 CDC14CA4D256 554 aa14.24□□□□□ -0.13
HMGN1-208ENST00000443046 WIPF3A6NGB9 483 aa14.24□□□□□ -0.13
HMGN1-208ENST00000443046 DAPK3O43293 454 aa14.24□□□□□ -0.13
HMGN1-208ENST00000443046 MAFKO60675 156 aa14.24□□□□□ -0.13
HMGN1-208ENST00000443046 FGF5P12034 268 aa14.24□□□□□ -0.13
HMGN1-208ENST00000443046 F3P13726 295 aa14.24□□□□□ -0.13
HMGN1-208ENST00000443046 ZNF30P17039 623 aa14.24□□□□□ -0.13
HMGN1-208ENST00000443046 CTPS1P17812 591 aa14.24□□□□□ -0.13
HMGN1-208ENST00000443046 NOP2P46087 812 aaKnown RBP14.24□□□□□ -0.13
HMGN1-208ENST00000443046 PPM1FP49593 454 aaPredicted RBP14.24□□□□□ -0.13
HMGN1-208ENST00000443046 ZNF135P52742 658 aaPredicted RBP14.24□□□□□ -0.13
HMGN1-208ENST00000443046 SH3BP2P78314 561 aa14.24□□□□□ -0.13
HMGN1-208ENST00000443046 FOXM1Q08050 763 aa14.24□□□□□ -0.13
HMGN1-208ENST00000443046 MAMLD1Q13495 774 aa14.24□□□□□ -0.13
HMGN1-208ENST00000443046 ARMC12Q5T9G4 340 aa14.24□□□□□ -0.13
HMGN1-208ENST00000443046 PAPD7Q5XG87 772 aaKnown RBP14.24□□□□□ -0.13
HMGN1-208ENST00000443046 CHST15Q7LFX5 561 aaPredicted RBP14.24□□□□□ -0.13
HMGN1-208ENST00000443046 EFCAB3Q8N7B9 438 aa14.24□□□□□ -0.13
HMGN1-208ENST00000443046 AGPAT1Q99943 283 aa14.24□□□□□ -0.13
HMGN1-208ENST00000443046 RIOK2Q9BVS4 552 aaKnown RBP14.24□□□□□ -0.13
HMGN1-208ENST00000443046 TRIM55Q9BYV6 548 aa14.24□□□□□ -0.13
HMGN1-208ENST00000443046 ZNF768Q9H5H4 540 aaKnown RBP14.24□□□□□ -0.13
HMGN1-208ENST00000443046 STN1Q9H668 368 aaKnown RBP14.24□□□□□ -0.13
HMGN1-208ENST00000443046 TAB2Q9NYJ8 693 aa14.24□□□□□ -0.13
HMGN1-208ENST00000443046 CPNE7Q9UBL6 633 aa14.24□□□□□ -0.13
HMGN1-208ENST00000443046 SIK3Q9Y2K2 1263 aa14.24□□□□□ -0.13
HMGN1-208ENST00000443046 PRKAB1Q9Y478 270 aa14.24□□□□□ -0.13
HMGN1-208ENST00000443046 OAS3Q9Y6K5 1087 aaKnown RBP14.24□□□□□ -0.13
HMGN1-208ENST00000443046 APCP25054 2843 aa14.24□□□□□ -0.13
HMGN1-208ENST00000443046 A0A0J9YYE9 177 aa14.23□□□□□ -0.13
HMGN1-208ENST00000443046 OR5K4A6NMS3 321 aa14.23□□□□□ -0.13
HMGN1-208ENST00000443046 KATNA1O75449 491 aa14.23□□□□□ -0.13
HMGN1-208ENST00000443046 DNAJB5O75953 348 aa14.23□□□□□ -0.13
HMGN1-208ENST00000443046 KIAA0754O94854 1291 aa14.23□□□□□ -0.13
HMGN1-208ENST00000443046 NDUFA10O95299 355 aa14.23□□□□□ -0.13
HMGN1-208ENST00000443046 DDAH2O95865 285 aa14.23□□□□□ -0.13
HMGN1-208ENST00000443046 TRBC1P01850 177 aa14.23□□□□□ -0.13
HMGN1-208ENST00000443046 ATP1A1P05023 1023 aaKnown RBP14.23□□□□□ -0.13
HMGN1-208ENST00000443046 SLC2A4P14672 509 aa14.23□□□□□ -0.13
HMGN1-208ENST00000443046 GARSP41250 739 aaKnown RBP14.23□□□□□ -0.13
HMGN1-208ENST00000443046 MAPK9P45984 424 aa14.23□□□□□ -0.13
HMGN1-208ENST00000443046 CLCNKAP51800 687 aa14.23□□□□□ -0.13
HMGN1-208ENST00000443046 STC1P52823 247 aa14.23□□□□□ -0.13
HMGN1-208ENST00000443046 MAXP61244 160 aa14.23□□□□□ -0.13
HMGN1-208ENST00000443046 IHHQ14623 411 aa14.23□□□□□ -0.13
HMGN1-208ENST00000443046 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.23□□□□□ -0.13
HMGN1-208ENST00000443046 PPP6R3Q5H9R7 873 aaPredicted RBP14.23□□□□□ -0.13
HMGN1-208ENST00000443046 ACAD10Q6JQN1 1059 aa14.23□□□□□ -0.13
HMGN1-208ENST00000443046 AVL9Q8NBF6 648 aa14.23□□□□□ -0.13
HMGN1-208ENST00000443046 OR6C1Q96RD1 312 aa14.23□□□□□ -0.13
HMGN1-208ENST00000443046 WDR24Q96S15 920 aa14.23□□□□□ -0.13
HMGN1-208ENST00000443046 TWSG1Q9GZX9 223 aa14.23□□□□□ -0.13
HMGN1-208ENST00000443046 RMI1Q9H9A7 625 aa14.23□□□□□ -0.13
HMGN1-208ENST00000443046 CNOT8Q9UFF9 292 aaKnown RBP14.23□□□□□ -0.13
HMGN1-208ENST00000443046 PCSK1NQ9UHG2 260 aa14.23□□□□□ -0.13
HMGN1-208ENST00000443046 PADI1Q9ULC6 663 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms