RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 ITPRIPL1Q6GPH6 555 aa20.9■□□□□ 0.94
CDKN3-204ENST00000442975 DARS2Q6PI48 645 aaKnown RBP20.9■□□□□ 0.94
CDKN3-204ENST00000442975 GPR26Q8NDV2 337 aa20.9■□□□□ 0.94
CDKN3-204ENST00000442975 GFM1Q96RP9 751 aaKnown RBP20.9■□□□□ 0.94
CDKN3-204ENST00000442975 GBA3Q9H227 469 aa20.9■□□□□ 0.94
CDKN3-204ENST00000442975 ARFGAP3Q9NP61 516 aa20.9■□□□□ 0.94
CDKN3-204ENST00000442975 LRIT1Q9P2V4 623 aa20.9■□□□□ 0.94
CDKN3-204ENST00000442975 ZNHIT2Q9UHR6 403 aa20.9■□□□□ 0.94
CDKN3-204ENST00000442975 CNOT6Q9ULM6 557 aaKnown RBP20.9■□□□□ 0.94
CDKN3-204ENST00000442975 LAMA5O15230 3695 aa20.9■□□□□ 0.94
CDKN3-204ENST00000442975 MIF4GDA9UHW6 222 aaKnown RBP20.89■□□□□ 0.93
CDKN3-204ENST00000442975 D6RAR5 112 aa20.89■□□□□ 0.93
CDKN3-204ENST00000442975 AURKAO14965 403 aa20.89■□□□□ 0.93
CDKN3-204ENST00000442975 KCNN4O15554 427 aa20.89■□□□□ 0.93
CDKN3-204ENST00000442975 RBP3P10745 1247 aa20.89■□□□□ 0.93
CDKN3-204ENST00000442975 DCDC1P59894 354 aa20.89■□□□□ 0.93
CDKN3-204ENST00000442975 CCL7P80098 99 aa20.89■□□□□ 0.93
CDKN3-204ENST00000442975 PYCR3Q53H96 274 aa20.89■□□□□ 0.93
CDKN3-204ENST00000442975 FOXR1Q6PIV2 292 aa20.89■□□□□ 0.93
CDKN3-204ENST00000442975 OGFOD3Q6PK18 319 aa20.89■□□□□ 0.93
CDKN3-204ENST00000442975 C19orf48Q6RUI8 117 aa20.89■□□□□ 0.93
CDKN3-204ENST00000442975 BLOC1S5Q8TDH9 187 aa20.89■□□□□ 0.93
CDKN3-204ENST00000442975 PATE1Q8WXA2 126 aa20.89■□□□□ 0.93
CDKN3-204ENST00000442975 SCARF2Q96GP6 870 aaPredicted RBP20.89■□□□□ 0.93
CDKN3-204ENST00000442975 MRGPRX2Q96LB1 330 aa20.89■□□□□ 0.93
CDKN3-204ENST00000442975 SRPK1Q96SB4 655 aaKnown RBP20.89■□□□□ 0.93
CDKN3-204ENST00000442975 ZSCAN5AQ9BUG6 496 aa20.89■□□□□ 0.93
CDKN3-204ENST00000442975 BPIFA1Q9NP55 256 aa20.89■□□□□ 0.93
CDKN3-204ENST00000442975 RAD18Q9NS91 495 aa20.89■□□□□ 0.93
CDKN3-204ENST00000442975 VPS18Q9P253 973 aa20.89■□□□□ 0.93
CDKN3-204ENST00000442975 ST14Q9Y5Y6 855 aa20.89■□□□□ 0.93
CDKN3-204ENST00000442975 GOLGA6L9A6NEM1 432 aa20.88■□□□□ 0.93
CDKN3-204ENST00000442975 RHPN2P1A8MT19 583 aa20.88■□□□□ 0.93
CDKN3-204ENST00000442975 ECEL1O95672 775 aa20.88■□□□□ 0.93
CDKN3-204ENST00000442975 FGF1P05230 155 aa20.88■□□□□ 0.93
CDKN3-204ENST00000442975 BPIP17213 487 aa20.88■□□□□ 0.93
CDKN3-204ENST00000442975 PDX1P52945 283 aa20.88■□□□□ 0.93
CDKN3-204ENST00000442975 MPP3Q13368 585 aa20.88■□□□□ 0.93
CDKN3-204ENST00000442975 PEX6Q13608 980 aa20.88■□□□□ 0.93
CDKN3-204ENST00000442975 TMC3Q7Z5M5 1100 aa20.88■□□□□ 0.93
CDKN3-204ENST00000442975 SPRED1Q7Z699 444 aa20.88■□□□□ 0.93
CDKN3-204ENST00000442975 PHYKPLQ8IUZ5 450 aa20.88■□□□□ 0.93
CDKN3-204ENST00000442975 TRAM1L1Q8N609 369 aa20.88■□□□□ 0.93
CDKN3-204ENST00000442975 FICDQ9BVA6 458 aa20.88■□□□□ 0.93
CDKN3-204ENST00000442975 FOXP3Q9BZS1 431 aa20.88■□□□□ 0.93
CDKN3-204ENST00000442975 EPB41L5Q9HCM4 733 aa20.88■□□□□ 0.93
CDKN3-204ENST00000442975 SATB2Q9UPW6 733 aa20.88■□□□□ 0.93
CDKN3-204ENST00000442975 PCYT1BQ9Y5K3 369 aaPredicted RBP20.88■□□□□ 0.93
CDKN3-204ENST00000442975 ENTPD2Q9Y5L3 495 aa20.88■□□□□ 0.93
CDKN3-204ENST00000442975 LOC285095A0A1B0GVY8 99 aa20.87■□□□□ 0.93
CDKN3-204ENST00000442975 A0A1W2PQM1 296 aa20.87■□□□□ 0.93
CDKN3-204ENST00000442975 NTN3O00634 580 aaPredicted RBP20.87■□□□□ 0.93
CDKN3-204ENST00000442975 TLX3O43711 291 aaPredicted RBP20.87■□□□□ 0.93
CDKN3-204ENST00000442975 NUDT21O43809 227 aaKnown RBP20.87■□□□□ 0.93
CDKN3-204ENST00000442975 ACP5P13686 325 aa20.87■□□□□ 0.93
CDKN3-204ENST00000442975 HLA-DPA1P20036 260 aa20.87■□□□□ 0.93
CDKN3-204ENST00000442975 PSMB4P28070 264 aa20.87■□□□□ 0.93
CDKN3-204ENST00000442975 ACTN2P35609 894 aa20.87■□□□□ 0.93
CDKN3-204ENST00000442975 LRP8Q14114 963 aa20.87■□□□□ 0.93
CDKN3-204ENST00000442975 TBC1D25Q3MII6 688 aa20.87■□□□□ 0.93
CDKN3-204ENST00000442975 ZNF648Q5T619 568 aaPredicted RBP20.87■□□□□ 0.93
CDKN3-204ENST00000442975 CHST15Q7LFX5 561 aaPredicted RBP20.87■□□□□ 0.93
CDKN3-204ENST00000442975 GLT6D1Q7Z4J2 308 aa20.87■□□□□ 0.93
CDKN3-204ENST00000442975 B3GNT8Q7Z7M8 397 aa20.87■□□□□ 0.93
CDKN3-204ENST00000442975 HNRNPLLQ8WVV9 542 aaKnown RBP20.87■□□□□ 0.93
CDKN3-204ENST00000442975 TSGA10Q9BZW7 698 aa20.87■□□□□ 0.93
CDKN3-204ENST00000442975 OR2AG1Q9H205 316 aa20.87■□□□□ 0.93
CDKN3-204ENST00000442975 LRRN3Q9H3W5 708 aa20.87■□□□□ 0.93
CDKN3-204ENST00000442975 POLR1BQ9H9Y6 1135 aa20.87■□□□□ 0.93
CDKN3-204ENST00000442975 APPL1Q9UKG1 709 aa20.87■□□□□ 0.93
CDKN3-204ENST00000442975 RALYQ9UKM9 306 aaKnown RBP20.87■□□□□ 0.93
CDKN3-204ENST00000442975 GUCA1BQ9UMX6 200 aa20.87■□□□□ 0.93
CDKN3-204ENST00000442975 KCNK6Q9Y257 313 aa20.87■□□□□ 0.93
CDKN3-204ENST00000442975 ADGRG1Q9Y653 693 aa20.87■□□□□ 0.93
CDKN3-204ENST00000442975 ACACAQ13085 2346 aa20.87■□□□□ 0.93
CDKN3-204ENST00000442975 DDX3YO15523 660 aaKnown RBP20.86■□□□□ 0.93
CDKN3-204ENST00000442975 DNAJC6O75061 913 aa20.86■□□□□ 0.93
CDKN3-204ENST00000442975 ANXA9O76027 345 aa20.86■□□□□ 0.93
CDKN3-204ENST00000442975 SLC25A14O95258 325 aaPredicted RBP20.86■□□□□ 0.93
CDKN3-204ENST00000442975 EPOP01588 193 aa20.86■□□□□ 0.93
CDKN3-204ENST00000442975 GEMP55040 296 aa20.86■□□□□ 0.93
CDKN3-204ENST00000442975 SLC1A5Q15758 541 aa20.86■□□□□ 0.93
CDKN3-204ENST00000442975 AMZ1Q400G9 498 aa20.86■□□□□ 0.93
CDKN3-204ENST00000442975 MAP9Q49MG5 647 aa20.86■□□□□ 0.93
CDKN3-204ENST00000442975 CCDC110Q8TBZ0 833 aa20.86■□□□□ 0.93
CDKN3-204ENST00000442975 GLYATL1Q969I3 302 aa20.86■□□□□ 0.93
CDKN3-204ENST00000442975 TRABDQ9H4I3 376 aa20.86■□□□□ 0.93
CDKN3-204ENST00000442975 NFKBIL1Q9UBC1 381 aaPredicted RBP20.86■□□□□ 0.93
CDKN3-204ENST00000442975 ATXN7L1Q9ULK2 861 aaPredicted RBP20.86■□□□□ 0.93
CDKN3-204ENST00000442975 DSPP15924 2871 aaKnown RBP20.86■□□□□ 0.93
CDKN3-204ENST00000442975 PMS2P1A4D2B8 440 aa20.85■□□□□ 0.93
CDKN3-204ENST00000442975 BUD23O43709 281 aaKnown RBP20.85■□□□□ 0.93
CDKN3-204ENST00000442975 MTX2O75431 263 aa20.85■□□□□ 0.93
CDKN3-204ENST00000442975 LSSP48449 732 aa20.85■□□□□ 0.93
CDKN3-204ENST00000442975 PRPSAP1Q14558 356 aa20.85■□□□□ 0.93
CDKN3-204ENST00000442975 PLA2G4EQ3MJ16 856 aa20.85■□□□□ 0.93
CDKN3-204ENST00000442975 ANKRD20A2Q5SQ80 823 aa20.85■□□□□ 0.93
CDKN3-204ENST00000442975 ANKRD20A1Q5TYW2 823 aa20.85■□□□□ 0.93
CDKN3-204ENST00000442975 ANKRD20A3Q5VUR7 823 aa20.85■□□□□ 0.93
CDKN3-204ENST00000442975 PDPK2PQ6A1A2 396 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms