RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 RSPO4Q2I0M5 234 aaPredicted RBP15.91■□□□□ 0.14
USP39-205ENST00000442708 KHDC1Q4VXA5 237 aaKnown RBP15.91■□□□□ 0.14
USP39-205ENST00000442708 LRRC8BQ6P9F7 803 aa15.91■□□□□ 0.14
USP39-205ENST00000442708 DOK6Q6PKX4 331 aa15.91■□□□□ 0.14
USP39-205ENST00000442708 DBX2Q6ZNG2 339 aa15.91■□□□□ 0.14
USP39-205ENST00000442708 SYDE1Q6ZW31 735 aaPredicted RBP15.91■□□□□ 0.14
USP39-205ENST00000442708 PHACTR4Q8IZ21 702 aa15.91■□□□□ 0.14
USP39-205ENST00000442708 AGGF1Q8N302 714 aaeCLIP15.91■□□□□ 0.14
USP39-205ENST00000442708 SLC25A45Q8N413 288 aa15.91■□□□□ 0.14
USP39-205ENST00000442708 OR56A4Q8NGH8 313 aa15.91■□□□□ 0.14
USP39-205ENST00000442708 KIF18AQ8NI77 898 aa15.91■□□□□ 0.14
USP39-205ENST00000442708 NETO1Q8TDF5 533 aa15.91■□□□□ 0.14
USP39-205ENST00000442708 RUNDC3BQ96NL0 473 aa15.91■□□□□ 0.14
USP39-205ENST00000442708 RANBP9Q96S59 729 aa15.91■□□□□ 0.14
USP39-205ENST00000442708 ZSCAN5AQ9BUG6 496 aa15.91■□□□□ 0.14
USP39-205ENST00000442708 NLE1Q9NVX2 485 aaPredicted RBP15.91■□□□□ 0.14
USP39-205ENST00000442708 KLQ9UEF7 1012 aa15.91■□□□□ 0.14
USP39-205ENST00000442708 SLC2A6Q9UGQ3 507 aa15.91■□□□□ 0.14
USP39-205ENST00000442708 BTBD3Q9Y2F9 522 aa15.91■□□□□ 0.14
USP39-205ENST00000442708 PCYT1BQ9Y5K3 369 aaPredicted RBP15.91■□□□□ 0.14
USP39-205ENST00000442708 ARID1BQ8NFD5 2236 aaPredicted RBP15.91■□□□□ 0.14
USP39-205ENST00000442708 GLYATL1P3A0A0U1RQE8 302 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 PRSS38A1L453 326 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 PCDHGA12O60330 932 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 PPFIA2O75334 1257 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 PIAS2O75928 621 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 CELA2BP08218 269 aaPredicted RBP15.9■□□□□ 0.14
USP39-205ENST00000442708 JUNDP17535 347 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 DGKAP23743 735 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 ADRA1DP25100 572 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 HTR1BP28222 390 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 ARRB1P49407 418 aaPredicted RBP15.9■□□□□ 0.14
USP39-205ENST00000442708 PPARDQ03181 441 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 TCEA2Q15560 299 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 IZUMO3Q5VZ72 239 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 RD3Q7Z3Z2 195 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 HID1Q8IV36 788 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 PPIL6Q8IXY8 311 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 MPP5Q8N3R9 675 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 OXR1Q8N573 874 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 MCUQ8NE86 351 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 OR13J1Q8NGT2 312 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 BTN2A2Q8WVV5 523 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 GLYATL1Q969I3 302 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 CAMK1GQ96NX5 476 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 TRIM31Q9BZY9 425 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 SUDS3Q9H7L9 328 aaPredicted RBP15.9■□□□□ 0.14
USP39-205ENST00000442708 CHRAC1Q9NRG0 131 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 SYBUQ9NX95 663 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 SLC17A4Q9Y2C5 497 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 TCAF1Q9Y4C2 921 aa15.9■□□□□ 0.14
USP39-205ENST00000442708 HEATR9A2RTY3 570 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 TNFRSF10CO14798 259 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 SLC30A4O14863 429 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 MTX2O75431 263 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 PYGLP06737 847 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 PRSS56P0CW18 603 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 GIMD1P0DJR0 217 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 RPL21P46778 160 aaKnown RBP15.89■□□□□ 0.13
USP39-205ENST00000442708 NPY2RP49146 381 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 CDKN1CP49918 316 aaPredicted RBP15.89■□□□□ 0.13
USP39-205ENST00000442708 HK3P52790 923 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 PDE1BQ01064 536 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 CKAP4Q07065 602 aaKnown RBP15.89■□□□□ 0.13
USP39-205ENST00000442708 SLC14A1Q13336 389 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 C1orf61Q13536 156 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 TSTD2Q5T7W7 516 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 ZDHHC20Q5W0Z9 365 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 PIP4P1Q86T03 277 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 ZNF548Q8NEK5 533 aaPredicted RBP15.89■□□□□ 0.13
USP39-205ENST00000442708 DTX3LQ8TDB6 740 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 STYXQ8WUJ0 223 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 CCDC97Q96F63 343 aaPredicted RBP15.89■□□□□ 0.13
USP39-205ENST00000442708 SCARF2Q96GP6 870 aaPredicted RBP15.89■□□□□ 0.13
USP39-205ENST00000442708 SERPINB12Q96P63 405 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 VPS35Q96QK1 796 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 C19orf43Q9BQ61 176 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 TRIM56Q9BRZ2 755 aaKnown RBP15.89■□□□□ 0.13
USP39-205ENST00000442708 LRRC61Q9BV99 259 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 CLPBQ9H078 707 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 FAM96AQ9H5X1 160 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 CYP4F12Q9HCS2 524 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 APOBEC3BQ9UH17 382 aaKnown RBP15.89■□□□□ 0.13
USP39-205ENST00000442708 PCDHGB2Q9Y5G2 931 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 DGKBQ9Y6T7 804 aa15.89■□□□□ 0.13
USP39-205ENST00000442708 FAM187AA6NFU0 413 aa15.88■□□□□ 0.13
USP39-205ENST00000442708 OR51F1A6NGY5 319 aa15.88■□□□□ 0.13
USP39-205ENST00000442708 SH3BP5O60239 455 aa15.88■□□□□ 0.13
USP39-205ENST00000442708 SRP72O76094 671 aaKnown RBP15.88■□□□□ 0.13
USP39-205ENST00000442708 SLC25A14O95258 325 aaPredicted RBP15.88■□□□□ 0.13
USP39-205ENST00000442708 RASGRP1O95267 797 aa15.88■□□□□ 0.13
USP39-205ENST00000442708 PRAMEF1O95521 474 aa15.88■□□□□ 0.13
USP39-205ENST00000442708 KELP23276 732 aa15.88■□□□□ 0.13
USP39-205ENST00000442708 MAGEA3P43357 314 aa15.88■□□□□ 0.13
USP39-205ENST00000442708 HNRNPKP61978 463 aaKnown RBP eCLIP15.88■□□□□ 0.13
USP39-205ENST00000442708 ACVR1Q04771 509 aa15.88■□□□□ 0.13
USP39-205ENST00000442708 PCID2Q5JVF3 399 aa15.88■□□□□ 0.13
USP39-205ENST00000442708 PDPK2PQ6A1A2 396 aa15.88■□□□□ 0.13
USP39-205ENST00000442708 MARK2Q7KZI7 788 aaKnown RBP15.88■□□□□ 0.13
USP39-205ENST00000442708 ADGRG6Q86SQ4 1221 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms