RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 FBXO9Q9UK97 447 aaPredicted RBP8.06□□□□□ -1.12
CCDC39-201ENST00000442201 PKP3Q9Y446 797 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 FADS3Q9Y5Q0 445 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 NUMBLQ9Y6R0 609 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 TNRC18O15417 2968 aaPredicted RBP8.06□□□□□ -1.12
CCDC39-201ENST00000442201 TPP1O14773 563 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 TM9SF1O15321 606 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 MTRF1O75570 445 aaKnown RBP8.06□□□□□ -1.12
CCDC39-201ENST00000442201 GOT2P00505 430 aaKnown RBP8.06□□□□□ -1.12
CCDC39-201ENST00000442201 ALDOAP04075 364 aaKnown RBP8.06□□□□□ -1.12
CCDC39-201ENST00000442201 F7P08709 466 aaPredicted RBP8.06□□□□□ -1.12
CCDC39-201ENST00000442201 ENDOUP21128 410 aaKnown RBP8.06□□□□□ -1.12
CCDC39-201ENST00000442201 PSMA3P25788 255 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 HMGCLP35914 325 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 CCNFP41002 786 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 ABCG1P45844 678 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 POLR2LP62875 67 aaKnown RBP8.06□□□□□ -1.12
CCDC39-201ENST00000442201 MPP1Q00013 466 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 PTPRRQ15256 657 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 FNDC3BQ53EP0 1204 aaKnown RBP8.06□□□□□ -1.12
CCDC39-201ENST00000442201 OR4L1Q8NH43 312 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 ATXN2LQ8WWM7 1075 aaKnown RBP8.06□□□□□ -1.12
CCDC39-201ENST00000442201 LRIG1Q96JA1 1093 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 ZNF317Q96PQ6 595 aaPredicted RBP8.06□□□□□ -1.12
CCDC39-201ENST00000442201 GPR22Q99680 433 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 MCMBPQ9BTE3 642 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 SLC13A1Q9BZW2 595 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 FAIMQ9NVQ4 179 aa8.06□□□□□ -1.12
CCDC39-201ENST00000442201 POLR3BQ9NW08 1133 aaPredicted RBP8.06□□□□□ -1.12
CCDC39-201ENST00000442201 MTO1Q9Y2Z2 717 aaKnown RBP8.06□□□□□ -1.12
CCDC39-201ENST00000442201 FAM32AQ9Y421 112 aaKnown RBP8.06□□□□□ -1.12
CCDC39-201ENST00000442201 MAGEA13PA6NCF6 341 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 OR51F1A6NGY5 319 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 CAPN8A6NHC0 703 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 KRT16P08779 473 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 TPBGLP0DKB5 382 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 GABRB3P28472 473 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 HNF1BP35680 557 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 SKIV2L2P42285 1042 aaKnown RBP8.05□□□□□ -1.12
CCDC39-201ENST00000442201 MLLT1Q03111 559 aaPredicted RBP8.05□□□□□ -1.12
CCDC39-201ENST00000442201 HTR4Q13639 388 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 AFTPHQ6ULP2 937 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 USP45Q70EL2 814 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 TRPM8Q7Z2W7 1104 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 LYSMD3Q7Z3D4 306 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 CILP2Q8IUL8 1156 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 PHTF2Q8N3S3 785 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 PPP1R14CQ8TAE6 165 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 TCP10LQ8TDR4 215 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 DENND1AQ8TEH3 1009 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 VOPP1Q96AW1 172 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 SCRN2Q96FV2 425 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 KLHL32Q96NJ5 620 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 CLK4Q9HAZ1 481 aaKnown RBP8.05□□□□□ -1.12
CCDC39-201ENST00000442201 ZFYVE1Q9HBF4 777 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 SNX15Q9NRS6 342 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 CATSPERZQ9NTU4 200 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 MKS1Q9NXB0 559 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 IL17CQ9P0M4 197 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 TRIOBPQ9H2D6 2365 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 MYOFQ9NZM1 2061 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 C1orf232A0A0U1RR37 186 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 CD3EAPO15446 510 aaKnown RBP8.05□□□□□ -1.12
CCDC39-201ENST00000442201 SERPINB7O75635 380 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 KAT7O95251 611 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 ENPP1P22413 925 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 S100A1P23297 94 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 HALP42357 657 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 LEPRP48357 1165 aaKnown RBP8.05□□□□□ -1.12
CCDC39-201ENST00000442201 WDR4P57081 412 aaKnown RBP8.05□□□□□ -1.12
CCDC39-201ENST00000442201 IL9RQ01113 521 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 ILF2Q12905 390 aaKnown RBP8.05□□□□□ -1.12
CCDC39-201ENST00000442201 BNIP1Q12981 228 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 USP10Q14694 798 aaKnown RBP8.05□□□□□ -1.12
CCDC39-201ENST00000442201 GSTA3Q16772 222 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 TMEM259Q4ZIN3 620 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 PDCD4Q53EL6 469 aaKnown RBP8.05□□□□□ -1.12
CCDC39-201ENST00000442201 FASTKD1Q53R41 847 aaKnown RBP8.05□□□□□ -1.12
CCDC39-201ENST00000442201 BRAT1Q6PJG6 821 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 GALNT7Q86SF2 657 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 ZSWIM9Q86XI8 627 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 ZNF366Q8N895 744 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 GPR150Q8NGU9 434 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 DNAJC9Q8WXX5 260 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 ISL2Q96A47 359 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 LYSMD1Q96S90 227 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 MTG2Q9H4K7 406 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 FBXO6Q9NRD1 293 aaPredicted RBP8.05□□□□□ -1.12
CCDC39-201ENST00000442201 MARCH4Q9P2E8 410 aaPredicted RBP8.05□□□□□ -1.12
CCDC39-201ENST00000442201 DKK3Q9UBP4 350 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 IL36AQ9UHA7 158 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 SLC39A10Q9ULF5 831 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 CARD8Q9Y2G2 431 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 WASF2Q9Y6W5 498 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 ANHXE9PGG2 379 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 ARNTLO00327 626 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 PEX11AO75192 247 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 LEFTY1O75610 366 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 HAUS5O94927 633 aa8.05□□□□□ -1.12
CCDC39-201ENST00000442201 ASMTLO95671 621 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms