RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 OAS3Q9Y6K5 1087 aaKnown RBP20.21■□□□□ 0.83
SHOX2-203ENST00000441443 S100A1P23297 94 aa20.2■□□□□ 0.82
SHOX2-203ENST00000441443 UNC50Q53HI1 259 aa20.2■□□□□ 0.82
SHOX2-203ENST00000441443 GPR158Q5T848 1215 aa20.2■□□□□ 0.82
SHOX2-203ENST00000441443 NEPROQ6NW34 567 aa20.2■□□□□ 0.82
SHOX2-203ENST00000441443 CLYBLQ8N0X4 340 aa20.2■□□□□ 0.82
SHOX2-203ENST00000441443 TEX37Q96LM6 180 aa20.2■□□□□ 0.82
SHOX2-203ENST00000441443 MID1IP1Q9NPA3 183 aa20.2■□□□□ 0.82
SHOX2-203ENST00000441443 ZNF639Q9UID6 485 aa20.2■□□□□ 0.82
SHOX2-203ENST00000441443 CCDC162PA2VCL2 907 aa20.2■□□□□ 0.82
SHOX2-203ENST00000441443 NCAM2O15394 837 aa20.2■□□□□ 0.82
SHOX2-203ENST00000441443 PMPCBO75439 489 aa20.2■□□□□ 0.82
SHOX2-203ENST00000441443 AGXTP21549 392 aa20.2■□□□□ 0.82
SHOX2-203ENST00000441443 ZNF792Q3KQV3 632 aa20.2■□□□□ 0.82
SHOX2-203ENST00000441443 MARCH8Q5T0T0 291 aa20.2■□□□□ 0.82
SHOX2-203ENST00000441443 RAVER1Q8IY67 606 aaKnown RBP20.2■□□□□ 0.82
SHOX2-203ENST00000441443 TWIST2Q8WVJ9 160 aa20.2■□□□□ 0.82
SHOX2-203ENST00000441443 NT5C3BQ969T7 300 aa20.2■□□□□ 0.82
SHOX2-203ENST00000441443 TMBIM1Q969X1 311 aa20.2■□□□□ 0.82
SHOX2-203ENST00000441443 HGH1Q9BTY7 390 aa20.2■□□□□ 0.82
SHOX2-203ENST00000441443 NOX1Q9Y5S8 564 aa20.2■□□□□ 0.82
SHOX2-203ENST00000441443 NDUFB5O43674 189 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 RBP1P09455 135 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 THRBP10828 461 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 POLD2P49005 469 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 RPL34P49207 117 aaKnown RBP20.19■□□□□ 0.82
SHOX2-203ENST00000441443 IST1P53990 364 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 SKIV2LQ15477 1246 aaKnown RBP20.19■□□□□ 0.82
SHOX2-203ENST00000441443 CTF1Q16619 201 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 DENND5AQ6IQ26 1287 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 UNC93AQ86WB7 457 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 DCP1BQ8IZD4 617 aaKnown RBP20.19■□□□□ 0.82
SHOX2-203ENST00000441443 OSCP1Q8WVF1 389 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 ZNF419Q96HQ0 510 aaPredicted RBP20.19■□□□□ 0.82
SHOX2-203ENST00000441443 MAGED4Q96JG8 741 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 TOR3AQ9H497 397 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 EXD2Q9NVH0 621 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 PCDHB3Q9Y5E6 796 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 MSI1O43347 362 aaKnown RBP20.19■□□□□ 0.82
SHOX2-203ENST00000441443 UGT2B4P06133 528 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 TKTL1P51854 596 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 ANKRD34AQ69YU3 496 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 SLC22A16Q86VW1 577 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 C8orf59Q8N0T1 100 aaPredicted RBP20.19■□□□□ 0.82
SHOX2-203ENST00000441443 ZCCHC7Q8N3Z6 543 aaKnown RBP20.19■□□□□ 0.82
SHOX2-203ENST00000441443 NSUN5Q96P11 429 aaKnown RBP20.19■□□□□ 0.82
SHOX2-203ENST00000441443 HPS4Q9NQG7 708 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 ENPP5Q9UJA9 477 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 ERVK-11Q9UQG0 969 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 MTSS1O43312 755 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 UGT2B11O75310 529 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 HRH2P25021 359 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 FPGSQ05932 587 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 SNX17Q15036 470 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 ACAP2Q15057 778 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 TIGD2Q4W5G0 525 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 TAF2Q6P1X5 1199 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 TMEM207Q6UWW9 146 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 PIM3Q86V86 326 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 SLC22A9Q8IVM8 553 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 PAPD5Q8NDF8 572 aaKnown RBP20.19■□□□□ 0.82
SHOX2-203ENST00000441443 OR52K2Q8NGK3 314 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 FAM124BQ9H5Z6 455 aaPredicted RBP20.19■□□□□ 0.82
SHOX2-203ENST00000441443 SMURF2Q9HAU4 748 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 SCUBE2Q9NQ36 999 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 ANKMY1Q9P2S6 941 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 GJD2Q9UKL4 321 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 ATP11BQ9Y2G3 1177 aa20.19■□□□□ 0.82
SHOX2-203ENST00000441443 DFFAO00273 331 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 CDK14O94921 469 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 ALOX5P09917 674 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 BMP4P12644 408 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 ALDH3A2P51648 485 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 GALNT1Q10472 559 aaPredicted RBP20.18■□□□□ 0.82
SHOX2-203ENST00000441443 DAG1Q14118 895 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 CBX2Q14781 532 aaPredicted RBP20.18■□□□□ 0.82
SHOX2-203ENST00000441443 FBXO48Q5FWF7 155 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 RALGPS2Q86X27 583 aaPredicted RBP20.18■□□□□ 0.82
SHOX2-203ENST00000441443 KIAA2013Q8IYS2 634 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 NDNFQ8TB73 568 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 CTRCQ99895 268 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 NDEL1Q9GZM8 345 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 TUBB1Q9H4B7 451 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 SCHIP1Q9P0W5 487 aaPredicted RBP20.18■□□□□ 0.82
SHOX2-203ENST00000441443 CITO14578 2027 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 ASPDHA6ND91 283 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 PSMD11O00231 422 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 NOBOXO60393 691 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 ALPLP05186 524 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 OR4D2P58180 307 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 ECT2LQ008S8 904 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 SEMA3BQ13214 749 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 TMEM236Q5W0B7 351 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 BLOC1S3Q6QNY0 202 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 PLEKHG7Q6ZR37 379 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 UTS2BQ765I0 119 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 TFAP2DQ7Z6R9 452 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 HS3ST5Q8IZT8 346 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 TTC30BQ8N4P2 665 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 SDCCAG3Q96C92 435 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms