RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 RAET1GQ6H3X3 334 aa18.11■□□□□ 0.49
SMPD4-210ENST00000441135 NYAP1Q6ZVC0 841 aa18.11■□□□□ 0.49
SMPD4-210ENST00000441135 LYSMD3Q7Z3D4 306 aa18.11■□□□□ 0.49
SMPD4-210ENST00000441135 HEATR4Q86WZ0 1026 aa18.11■□□□□ 0.49
SMPD4-210ENST00000441135 PELI3Q8N2H9 469 aa18.11■□□□□ 0.49
SMPD4-210ENST00000441135 FAM71DQ8N9W8 422 aa18.11■□□□□ 0.49
SMPD4-210ENST00000441135 IPMKQ8NFU5 416 aa18.11■□□□□ 0.49
SMPD4-210ENST00000441135 CCDC110Q8TBZ0 833 aa18.11■□□□□ 0.49
SMPD4-210ENST00000441135 DTX3LQ8TDB6 740 aa18.11■□□□□ 0.49
SMPD4-210ENST00000441135 HNRNPLLQ8WVV9 542 aaKnown RBP18.11■□□□□ 0.49
SMPD4-210ENST00000441135 FGF11Q92914 225 aa18.11■□□□□ 0.49
SMPD4-210ENST00000441135 DCBLD2Q96PD2 775 aa18.11■□□□□ 0.49
SMPD4-210ENST00000441135 CCDC3Q9BQI4 270 aa18.11■□□□□ 0.49
SMPD4-210ENST00000441135 LGR4Q9BXB1 951 aa18.11■□□□□ 0.49
SMPD4-210ENST00000441135 CYP4F12Q9HCS2 524 aa18.11■□□□□ 0.49
SMPD4-210ENST00000441135 SIRPGQ9P1W8 387 aa18.11■□□□□ 0.49
SMPD4-210ENST00000441135 FEZ2Q9UHY8 353 aaPredicted RBP18.11■□□□□ 0.49
SMPD4-210ENST00000441135 RALYQ9UKM9 306 aaKnown RBP18.11■□□□□ 0.49
SMPD4-210ENST00000441135 URB1O60287 2271 aaKnown RBP18.1■□□□□ 0.49
SMPD4-210ENST00000441135 PRSS38A1L453 326 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 KIF5CO60282 957 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 DXOO77932 396 aaKnown RBP18.1■□□□□ 0.49
SMPD4-210ENST00000441135 HMGCLP35914 325 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 EIF2S3P41091 472 aaKnown RBP18.1■□□□□ 0.49
SMPD4-210ENST00000441135 ABCG1P45844 678 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 GPR1P46091 355 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 LSSP48449 732 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 GABREP78334 506 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 SIX1Q15475 284 aaPredicted RBP18.1■□□□□ 0.49
SMPD4-210ENST00000441135 CCNG2Q16589 344 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 SIRPB2Q5JXA9 342 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 FAM182AQ5T1J6 154 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 ZDHHC20Q5W0Z9 365 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 PDPK2PQ6A1A2 396 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 RANBP10Q6VN20 620 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 LRRC69Q6ZNQ3 347 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 ARHGEF18Q6ZSZ5 1173 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 KDELC2Q7Z4H8 507 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 TAF8Q7Z7C8 310 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 ATG4AQ8WYN0 398 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 PBKQ96KB5 322 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 C19orf43Q9BQ61 176 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 TMEM121Q9BTD3 319 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 FRMD8Q9BZ67 464 aaPredicted RBP18.1■□□□□ 0.49
SMPD4-210ENST00000441135 FAM83DQ9H4H8 585 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 POLR1BQ9H9Y6 1135 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 ARNT2Q9HBZ2 717 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 MRPL40Q9NQ50 206 aaKnown RBP18.1■□□□□ 0.49
SMPD4-210ENST00000441135 HOMER3Q9NSC5 361 aa18.1■□□□□ 0.49
SMPD4-210ENST00000441135 TTC7AQ9ULT0 858 aaPredicted RBP18.1■□□□□ 0.49
SMPD4-210ENST00000441135 A0A0U1RQS6 177 aa18.09■□□□□ 0.49
SMPD4-210ENST00000441135 PSMD3O43242 534 aa18.09■□□□□ 0.49
SMPD4-210ENST00000441135 TLX3O43711 291 aaPredicted RBP18.09■□□□□ 0.49
SMPD4-210ENST00000441135 PPFIA2O75334 1257 aa18.09■□□□□ 0.49
SMPD4-210ENST00000441135 FGGP02679 453 aa18.09■□□□□ 0.49
SMPD4-210ENST00000441135 MPOP05164 745 aa18.09■□□□□ 0.49
SMPD4-210ENST00000441135 SPIDRQ14159 915 aa18.09■□□□□ 0.49
SMPD4-210ENST00000441135 KCTD11Q693B1 232 aa18.09■□□□□ 0.49
SMPD4-210ENST00000441135 RFLNAQ6ZTI6 216 aa18.09■□□□□ 0.49
SMPD4-210ENST00000441135 PDZD3Q86UT5 571 aa18.09■□□□□ 0.49
SMPD4-210ENST00000441135 RASGEF1CQ8N431 466 aa18.09■□□□□ 0.49
SMPD4-210ENST00000441135 FAM46DQ8NEK8 389 aa18.09■□□□□ 0.49
SMPD4-210ENST00000441135 GPR156Q8NFN8 814 aa18.09■□□□□ 0.49
SMPD4-210ENST00000441135 SCAMP4Q969E2 229 aa18.09■□□□□ 0.49
SMPD4-210ENST00000441135 CCDC74AQ96AQ1 378 aa18.09■□□□□ 0.49
SMPD4-210ENST00000441135 EID2BQ96D98 161 aa18.09■□□□□ 0.49
SMPD4-210ENST00000441135 COX14Q96I36 57 aa18.09■□□□□ 0.49
SMPD4-210ENST00000441135 ZNF578Q96N58 590 aaPredicted RBP18.09■□□□□ 0.49
SMPD4-210ENST00000441135 PLEKHG4BQ96PX9 1271 aa18.09■□□□□ 0.49
SMPD4-210ENST00000441135 WDR24Q96S15 920 aa18.09■□□□□ 0.49
SMPD4-210ENST00000441135 GPR63Q9BZJ6 419 aa18.09■□□□□ 0.49
SMPD4-210ENST00000441135 TMEM168Q9H0V1 697 aa18.09■□□□□ 0.49
SMPD4-210ENST00000441135 CARS2Q9HA77 564 aaKnown RBP18.09■□□□□ 0.49
SMPD4-210ENST00000441135 MOSPD1Q9UJG1 213 aa18.09■□□□□ 0.49
SMPD4-210ENST00000441135 DRG1Q9Y295 367 aaKnown RBP18.09■□□□□ 0.49
SMPD4-210ENST00000441135 SLC17A4Q9Y2C5 497 aa18.09■□□□□ 0.49
SMPD4-210ENST00000441135 MYLKQ15746 1914 aa18.09■□□□□ 0.49
SMPD4-210ENST00000441135 ERI2A8K979 691 aaKnown RBP18.08■□□□□ 0.48
SMPD4-210ENST00000441135 CES2O00748 559 aa18.08■□□□□ 0.48
SMPD4-210ENST00000441135 CEACAM5P06731 702 aa18.08■□□□□ 0.48
SMPD4-210ENST00000441135 IVLP07476 585 aa18.08■□□□□ 0.48
SMPD4-210ENST00000441135 GDF10P55107 478 aa18.08■□□□□ 0.48
SMPD4-210ENST00000441135 ILF3Q12906 894 aaKnown RBP eCLIP18.08■□□□□ 0.48
SMPD4-210ENST00000441135 ZNF569Q5MCW4 686 aa18.08■□□□□ 0.48
SMPD4-210ENST00000441135 OGFOD3Q6PK18 319 aa18.08■□□□□ 0.48
SMPD4-210ENST00000441135 TTC30BQ8N4P2 665 aa18.08■□□□□ 0.48
SMPD4-210ENST00000441135 SCARF2Q96GP6 870 aaPredicted RBP18.08■□□□□ 0.48
SMPD4-210ENST00000441135 ATXN7L3BQ96GX2 97 aa18.08■□□□□ 0.48
SMPD4-210ENST00000441135 HIC2Q96JB3 615 aa18.08■□□□□ 0.48
SMPD4-210ENST00000441135 ZSCAN5AQ9BUG6 496 aa18.08■□□□□ 0.48
SMPD4-210ENST00000441135 FICDQ9BVA6 458 aa18.08■□□□□ 0.48
SMPD4-210ENST00000441135 RIOK2Q9BVS4 552 aaKnown RBP18.08■□□□□ 0.48
SMPD4-210ENST00000441135 GSDMCQ9BYG8 508 aa18.08■□□□□ 0.48
SMPD4-210ENST00000441135 SYNDIG1Q9H7V2 258 aa18.08■□□□□ 0.48
SMPD4-210ENST00000441135 TRNAU1APQ9NX07 287 aaKnown RBP18.08■□□□□ 0.48
SMPD4-210ENST00000441135 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.08■□□□□ 0.48
SMPD4-210ENST00000441135 CD84Q9UIB8 345 aa18.08■□□□□ 0.48
SMPD4-210ENST00000441135 SHOC2Q9UQ13 582 aa18.08■□□□□ 0.48
SMPD4-210ENST00000441135 SPO11Q9Y5K1 396 aa18.08■□□□□ 0.48
SMPD4-210ENST00000441135 ENTPD2Q9Y5L3 495 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms