RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 DDX56Q9NY93 547 aaKnown RBP16.68■□□□□ 0.26
COL16A1-204ENST00000440437 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.68■□□□□ 0.26
COL16A1-204ENST00000440437 HYOU1Q9Y4L1 999 aa16.68■□□□□ 0.26
COL16A1-204ENST00000440437 SDK2Q58EX2 2172 aa16.68■□□□□ 0.26
COL16A1-204ENST00000440437 IGHV1OR21-1A0A087WYE8 117 aa16.67■□□□□ 0.26
COL16A1-204ENST00000440437 PRAMEF33A0A0G2JMD5 474 aa16.67■□□□□ 0.26
COL16A1-204ENST00000440437 IGHV5-10-1A0A0J9YXX1 117 aa16.67■□□□□ 0.26
COL16A1-204ENST00000440437 RGSL1A5PLK6 1076 aa16.67■□□□□ 0.26
COL16A1-204ENST00000440437 AGRPO00253 132 aa16.67■□□□□ 0.26
COL16A1-204ENST00000440437 ZW10O43264 779 aa16.67■□□□□ 0.26
COL16A1-204ENST00000440437 PRAMEF10O60809 474 aa16.67■□□□□ 0.26
COL16A1-204ENST00000440437 ASMTLO95671 621 aa16.67■□□□□ 0.26
COL16A1-204ENST00000440437 EML2O95834 649 aa16.67■□□□□ 0.26
COL16A1-204ENST00000440437 CSF2RBP32927 897 aa16.67■□□□□ 0.26
COL16A1-204ENST00000440437 SQSTM1Q13501 440 aa16.67■□□□□ 0.26
COL16A1-204ENST00000440437 SLC14A2Q15849 920 aa16.67■□□□□ 0.26
COL16A1-204ENST00000440437 TAZQ16635 292 aa16.67■□□□□ 0.26
COL16A1-204ENST00000440437 MFSD7Q6UXD7 560 aa16.67■□□□□ 0.26
COL16A1-204ENST00000440437 NT5DC3Q86UY8 548 aa16.67■□□□□ 0.26
COL16A1-204ENST00000440437 RFX6Q8HWS3 928 aa16.67■□□□□ 0.26
COL16A1-204ENST00000440437 SFRP1Q8N474 314 aa16.67■□□□□ 0.26
COL16A1-204ENST00000440437 CCHCR1Q8TD31 782 aa16.67■□□□□ 0.26
COL16A1-204ENST00000440437 SLC37A2Q8TED4 501 aa16.67■□□□□ 0.26
COL16A1-204ENST00000440437 WBP1Q96G27 269 aa16.67■□□□□ 0.26
COL16A1-204ENST00000440437 CCNL2Q96S94 520 aaPredicted RBP16.67■□□□□ 0.26
COL16A1-204ENST00000440437 MAK16Q9BXY0 300 aaKnown RBP16.67■□□□□ 0.26
COL16A1-204ENST00000440437 BRD8Q9H0E9 1235 aa16.67■□□□□ 0.26
COL16A1-204ENST00000440437 SLC25A51Q9H1U9 297 aa16.67■□□□□ 0.26
COL16A1-204ENST00000440437 FAM83DQ9H4H8 585 aa16.67■□□□□ 0.26
COL16A1-204ENST00000440437 NFKBIL1Q9UBC1 381 aaPredicted RBP16.67■□□□□ 0.26
COL16A1-204ENST00000440437 AHCTF1Q8WYP5 2266 aa16.67■□□□□ 0.26
COL16A1-204ENST00000440437 C9orf172C9J069 976 aa16.66■□□□□ 0.26
COL16A1-204ENST00000440437 AKR1B15C9JRZ8 316 aaPredicted RBP16.66■□□□□ 0.26
COL16A1-204ENST00000440437 HGSO14964 777 aaPredicted RBP16.66■□□□□ 0.26
COL16A1-204ENST00000440437 EFSO43281 561 aa16.66■□□□□ 0.26
COL16A1-204ENST00000440437 LIPCP11150 499 aa16.66■□□□□ 0.26
COL16A1-204ENST00000440437 COMTP21964 271 aa16.66■□□□□ 0.26
COL16A1-204ENST00000440437 CDKN2BP42772 138 aa16.66■□□□□ 0.26
COL16A1-204ENST00000440437 NOP2P46087 812 aaKnown RBP16.66■□□□□ 0.26
COL16A1-204ENST00000440437 LIMK2P53671 638 aa16.66■□□□□ 0.26
COL16A1-204ENST00000440437 HADHBP55084 474 aaKnown RBP16.66■□□□□ 0.26
COL16A1-204ENST00000440437 DCDC1P59894 354 aa16.66■□□□□ 0.26
COL16A1-204ENST00000440437 DYNLT1P63172 113 aa16.66■□□□□ 0.26
COL16A1-204ENST00000440437 CFHR1Q03591 330 aa16.66■□□□□ 0.26
COL16A1-204ENST00000440437 C19orf57Q0VDD7 668 aa16.66■□□□□ 0.26
COL16A1-204ENST00000440437 PRKD1Q15139 912 aaPredicted RBP16.66■□□□□ 0.26
COL16A1-204ENST00000440437 TGIF1Q15583 401 aa16.66■□□□□ 0.26
COL16A1-204ENST00000440437 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.66■□□□□ 0.26
COL16A1-204ENST00000440437 CCDC81Q6ZN84 652 aa16.66■□□□□ 0.26
COL16A1-204ENST00000440437 USP53Q70EK8 1073 aa16.66■□□□□ 0.26
COL16A1-204ENST00000440437 B4GALNT4Q76KP1 1039 aa16.66■□□□□ 0.26
COL16A1-204ENST00000440437 CCDC74BQ96LY2 380 aa16.66■□□□□ 0.26
COL16A1-204ENST00000440437 AGAP3Q96P47 875 aa16.66■□□□□ 0.26
COL16A1-204ENST00000440437 B3GNT4Q9C0J1 378 aa16.66■□□□□ 0.26
COL16A1-204ENST00000440437 RMI1Q9H9A7 625 aa16.66■□□□□ 0.26
COL16A1-204ENST00000440437 ZFYVE1Q9HBF4 777 aa16.66■□□□□ 0.26
COL16A1-204ENST00000440437 FOXJ2Q9P0K8 574 aa16.66■□□□□ 0.26
COL16A1-204ENST00000440437 SEPT10Q9P0V9 454 aa16.66■□□□□ 0.26
COL16A1-204ENST00000440437 PRKAB1Q9Y478 270 aa16.66■□□□□ 0.26
COL16A1-204ENST00000440437 ZNF106Q9H2Y7 1883 aaKnown RBP16.65■□□□□ 0.26
COL16A1-204ENST00000440437 A6NCN8 305 aa16.65■□□□□ 0.26
COL16A1-204ENST00000440437 PSTPIP1O43586 416 aa16.65■□□□□ 0.26
COL16A1-204ENST00000440437 MT-CYBP00156 380 aaPredicted RBP16.65■□□□□ 0.26
COL16A1-204ENST00000440437 PIRTP0C851 137 aa16.65■□□□□ 0.26
COL16A1-204ENST00000440437 THRAP10827 490 aa16.65■□□□□ 0.26
COL16A1-204ENST00000440437 MAPK10P53779 464 aa16.65■□□□□ 0.26
COL16A1-204ENST00000440437 CDK18Q07002 472 aa16.65■□□□□ 0.26
COL16A1-204ENST00000440437 BIRC2Q13490 618 aa16.65■□□□□ 0.26
COL16A1-204ENST00000440437 TRA2AQ13595 282 aaKnown RBP eCLIP16.65■□□□□ 0.26
COL16A1-204ENST00000440437 TEX44Q53QW1 395 aa16.65■□□□□ 0.26
COL16A1-204ENST00000440437 NKAIN2Q5VXU1 208 aa16.65■□□□□ 0.26
COL16A1-204ENST00000440437 SARM1Q6SZW1 724 aa16.65■□□□□ 0.26
COL16A1-204ENST00000440437 CHST15Q7LFX5 561 aaPredicted RBP16.65■□□□□ 0.26
COL16A1-204ENST00000440437 TMC3Q7Z5M5 1100 aa16.65■□□□□ 0.26
COL16A1-204ENST00000440437 ZNF843Q8N446 348 aa16.65■□□□□ 0.26
COL16A1-204ENST00000440437 TC2NQ8N9U0 490 aa16.65■□□□□ 0.26
COL16A1-204ENST00000440437 RCBTB1Q8NDN9 531 aa16.65■□□□□ 0.26
COL16A1-204ENST00000440437 GPR26Q8NDV2 337 aa16.65■□□□□ 0.26
COL16A1-204ENST00000440437 OR4D9Q8NGE8 314 aa16.65■□□□□ 0.26
COL16A1-204ENST00000440437 SPATA22Q8NHS9 363 aa16.65■□□□□ 0.26
COL16A1-204ENST00000440437 USP7Q93009 1102 aa16.65■□□□□ 0.26
COL16A1-204ENST00000440437 CARD9Q9H257 536 aa16.65■□□□□ 0.26
COL16A1-204ENST00000440437 MAGEE1Q9HCI5 957 aa16.65■□□□□ 0.26
COL16A1-204ENST00000440437 KCNK4Q9NYG8 393 aa16.65■□□□□ 0.26
COL16A1-204ENST00000440437 ZNHIT2Q9UHR6 403 aa16.65■□□□□ 0.26
COL16A1-204ENST00000440437 ZNF711Q9Y462 761 aa16.65■□□□□ 0.26
COL16A1-204ENST00000440437 ADGRG1Q9Y653 693 aa16.65■□□□□ 0.26
COL16A1-204ENST00000440437 GCN1Q92616 2671 aaKnown RBP16.64■□□□□ 0.26
COL16A1-204ENST00000440437 SPOPO43791 374 aa16.64■□□□□ 0.25
COL16A1-204ENST00000440437 NUAK1O60285 661 aa16.64■□□□□ 0.25
COL16A1-204ENST00000440437 CCL4P13236 92 aa16.64■□□□□ 0.25
COL16A1-204ENST00000440437 TNNT1P13805 278 aa16.64■□□□□ 0.25
COL16A1-204ENST00000440437 PECAM1P16284 738 aaPredicted RBP16.64■□□□□ 0.25
COL16A1-204ENST00000440437 PTPN3P26045 913 aa16.64■□□□□ 0.25
COL16A1-204ENST00000440437 NR2C2P49116 596 aa16.64■□□□□ 0.25
COL16A1-204ENST00000440437 GPLD1P80108 840 aa16.64■□□□□ 0.25
COL16A1-204ENST00000440437 SRSF6Q13247 344 aaKnown RBP16.64■□□□□ 0.25
COL16A1-204ENST00000440437 PCSK7Q16549 785 aa16.64■□□□□ 0.25
COL16A1-204ENST00000440437 TAF1BQ53T94 588 aaPredicted RBP16.64■□□□□ 0.25
COL16A1-204ENST00000440437 KIAA1614Q5VZ46 1190 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms