RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 ACTR1AP61163 376 aa13.63□□□□□ -0.23
LTBR-202ENST00000440421 SLC1A5Q15758 541 aa13.63□□□□□ -0.23
LTBR-202ENST00000440421 ISXQ2M1V0 245 aa13.63□□□□□ -0.23
LTBR-202ENST00000440421 C14orf28Q4W4Y0 310 aa13.63□□□□□ -0.23
LTBR-202ENST00000440421 PYCR3Q53H96 274 aa13.63□□□□□ -0.23
LTBR-202ENST00000440421 ZNF569Q5MCW4 686 aa13.63□□□□□ -0.23
LTBR-202ENST00000440421 ZNF648Q5T619 568 aaPredicted RBP13.63□□□□□ -0.23
LTBR-202ENST00000440421 GALNT13Q8IUC8 556 aa13.63□□□□□ -0.23
LTBR-202ENST00000440421 LRRC8AQ8IWT6 810 aa13.63□□□□□ -0.23
LTBR-202ENST00000440421 Q8N9G6 341 aaPredicted RBP13.63□□□□□ -0.23
LTBR-202ENST00000440421 CCDC110Q8TBZ0 833 aa13.63□□□□□ -0.23
LTBR-202ENST00000440421 BLOC1S5Q8TDH9 187 aa13.63□□□□□ -0.23
LTBR-202ENST00000440421 ZDHHC1Q8WTX9 485 aa13.63□□□□□ -0.23
LTBR-202ENST00000440421 SCARF2Q96GP6 870 aaPredicted RBP13.63□□□□□ -0.23
LTBR-202ENST00000440421 SRPK1Q96SB4 655 aaKnown RBP13.63□□□□□ -0.23
LTBR-202ENST00000440421 GORASP1Q9BQQ3 440 aa13.63□□□□□ -0.23
LTBR-202ENST00000440421 NRSN2Q9GZP1 204 aa13.63□□□□□ -0.23
LTBR-202ENST00000440421 RAD18Q9NS91 495 aa13.63□□□□□ -0.23
LTBR-202ENST00000440421 RAXQ9Y2V3 346 aa13.63□□□□□ -0.23
LTBR-202ENST00000440421 PCYT1BQ9Y5K3 369 aaPredicted RBP13.63□□□□□ -0.23
LTBR-202ENST00000440421 RNF215Q9Y6U7 377 aa13.63□□□□□ -0.23
LTBR-202ENST00000440421 BUD23O43709 281 aaKnown RBP13.62□□□□□ -0.23
LTBR-202ENST00000440421 DNAJC6O75061 913 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 USP12O75317 370 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 SLC25A14O95258 325 aaPredicted RBP13.62□□□□□ -0.23
LTBR-202ENST00000440421 RPLP0P05388 317 aaKnown RBP13.62□□□□□ -0.23
LTBR-202ENST00000440421 CCDC175P0C221 793 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 GLB1P16278 677 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 HLA-DPA1P20036 260 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 DCDC1P59894 354 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 CCL7P80098 99 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 OLIG2Q13516 323 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 SPIDRQ14159 915 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 HLTFQ14527 1009 aaKnown RBP eCLIP13.62□□□□□ -0.23
LTBR-202ENST00000440421 PRPSAP1Q14558 356 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 CERCAMQ5T4B2 595 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 RBM44Q6ZP01 1051 aaKnown RBP13.62□□□□□ -0.23
LTBR-202ENST00000440421 CHST15Q7LFX5 561 aaPredicted RBP13.62□□□□□ -0.23
LTBR-202ENST00000440421 TTC30BQ8N4P2 665 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 TRAM1L1Q8N609 369 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 FAM71DQ8N9W8 422 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 TTC13Q8NBP0 860 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 OR6C4Q8NGE1 309 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 PATE1Q8WXA2 126 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 SPATA13Q96N96 652 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 APOL2Q9BQE5 337 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 ZSCAN5AQ9BUG6 496 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 LZTFL1Q9NQ48 299 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 VPS18Q9P253 973 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 LRIT1Q9P2V4 623 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 DKK4Q9UBT3 224 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 R3HDM2Q9Y2K5 976 aaKnown RBP13.62□□□□□ -0.23
LTBR-202ENST00000440421 RP1P56715 2156 aa13.62□□□□□ -0.23
LTBR-202ENST00000440421 COL27A1Q8IZC6 1860 aaPredicted RBP13.61□□□□□ -0.23
LTBR-202ENST00000440421 BRINP1O60477 761 aa13.61□□□□□ -0.23
LTBR-202ENST00000440421 ECEL1O95672 775 aa13.61□□□□□ -0.23
LTBR-202ENST00000440421 MPOP05164 745 aa13.61□□□□□ -0.23
LTBR-202ENST00000440421 CCZ1BP86790 482 aa13.61□□□□□ -0.23
LTBR-202ENST00000440421 CCZ1P86791 482 aaPredicted RBP13.61□□□□□ -0.23
LTBR-202ENST00000440421 KLF1Q13351 362 aaPredicted RBP13.61□□□□□ -0.23
LTBR-202ENST00000440421 BIRC2Q13490 618 aa13.61□□□□□ -0.23
LTBR-202ENST00000440421 RTP5Q14D33 572 aa13.61□□□□□ -0.23
LTBR-202ENST00000440421 GLT6D1Q7Z4J2 308 aa13.61□□□□□ -0.23
LTBR-202ENST00000440421 CCNJLQ8IV13 435 aa13.61□□□□□ -0.23
LTBR-202ENST00000440421 GLYATL1Q969I3 302 aa13.61□□□□□ -0.23
LTBR-202ENST00000440421 ATXN7L3BQ96GX2 97 aa13.61□□□□□ -0.23
LTBR-202ENST00000440421 GFM1Q96RP9 751 aaKnown RBP13.61□□□□□ -0.23
LTBR-202ENST00000440421 OR2AG1Q9H205 316 aa13.61□□□□□ -0.23
LTBR-202ENST00000440421 LRRN3Q9H3W5 708 aa13.61□□□□□ -0.23
LTBR-202ENST00000440421 TRABDQ9H4I3 376 aa13.61□□□□□ -0.23
LTBR-202ENST00000440421 HACD3Q9P035 362 aa13.61□□□□□ -0.23
LTBR-202ENST00000440421 ATXN10Q9UBB4 475 aa13.61□□□□□ -0.23
LTBR-202ENST00000440421 NFKBIL1Q9UBC1 381 aaPredicted RBP13.61□□□□□ -0.23
LTBR-202ENST00000440421 AAR2Q9Y312 384 aaKnown RBP13.61□□□□□ -0.23
LTBR-202ENST00000440421 ENTPD2Q9Y5L3 495 aa13.61□□□□□ -0.23
LTBR-202ENST00000440421 SCN8AQ9UQD0 1980 aa13.61□□□□□ -0.23
LTBR-202ENST00000440421 KMT2BQ9UMN6 2715 aaPredicted RBP13.61□□□□□ -0.23
LTBR-202ENST00000440421 KNTC1P50748 2209 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 TRBV23OR9-2A0A075B6M9 112 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 A0A1W2PQM1 296 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 NTN3O00634 580 aaPredicted RBP13.6□□□□□ -0.23
LTBR-202ENST00000440421 NUDT21O43809 227 aaKnown RBP13.6□□□□□ -0.23
LTBR-202ENST00000440421 MTX2O75431 263 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 TCEA3O75764 348 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 ACP5P13686 325 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 ZNF8P17098 575 aaPredicted RBP13.6□□□□□ -0.23
LTBR-202ENST00000440421 HMGCLP35914 325 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 GABREP78334 506 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 LRP8Q14114 963 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 SPARCL1Q14515 664 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 PTPRCAPQ14761 206 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 C3orf38Q5JPI3 329 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 SEL1L2Q5TEA6 688 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 CRTC3Q6UUV7 619 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 ARHGEF18Q6ZSZ5 1173 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 ADGRG6Q86SQ4 1221 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 PHYKPLQ8IUZ5 450 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 NAGSQ8N159 534 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 ARL14Q8N4G2 192 aa13.6□□□□□ -0.23
LTBR-202ENST00000440421 TAB3Q8N5C8 712 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms