RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 PRKAG2Q9UGJ0 569 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 SPO11Q9Y5K1 396 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 A0A0C4DFX4 3053 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 CHD9Q3L8U1 2897 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 NEMP2A6NFY4 417 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 TMEM114B3SHH9 223 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 NEMP1O14524 444 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 PIGNO95427 931 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 S1PR4O95977 384 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 ADH1AP07327 375 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 PRSS56P0CW18 603 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 CTSAP10619 480 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 CREMQ03060 361 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 ARL13AQ5H913 290 aaPredicted RBP14.11□□□□□ -0.15
LIMD1-202ENST00000440097 KLHL35Q6PF15 583 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 ALDH16A1Q8IZ83 802 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 EXT2Q93063 718 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 NSMCE3Q96MG7 304 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 TCF25Q9BQ70 676 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 TDRD1Q9BXT4 1180 aaKnown RBP14.11□□□□□ -0.15
LIMD1-202ENST00000440097 ZBP1Q9H171 429 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 FAM96AQ9H5X1 160 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 HEMK1Q9Y5R4 338 aaPredicted RBP14.11□□□□□ -0.15
LIMD1-202ENST00000440097 CARNS1A5YM72 827 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 E9PBE3 544 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 KIAA0355O15063 1070 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 CCL16O15467 120 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 DLX3O60479 287 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 KLHL41O60662 606 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 BAIAP3O94812 1187 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 SYN1P17600 705 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 CDH2P19022 906 aaPredicted RBP14.1□□□□□ -0.15
LIMD1-202ENST00000440097 MPSTP25325 297 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 MSX2P35548 267 aaPredicted RBP14.1□□□□□ -0.15
LIMD1-202ENST00000440097 NR1H2P55055 460 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 ATXN7L2Q5T6C5 722 aaPredicted RBP14.1□□□□□ -0.15
LIMD1-202ENST00000440097 ALG1LQ6GMV1 187 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 WFDC5Q8TCV5 224 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 MRPL57Q9BQC6 102 aaKnown RBP14.1□□□□□ -0.15
LIMD1-202ENST00000440097 RTKNQ9BST9 563 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 POMKQ9H5K3 350 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 BPIFA1Q9NP55 256 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 RIMS3Q9UJD0 308 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 FIS1Q9Y3D6 152 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 MTF2Q9Y483 593 aaPredicted RBP14.1□□□□□ -0.15
LIMD1-202ENST00000440097 ARIH1Q9Y4X5 557 aaPredicted RBP14.1□□□□□ -0.15
LIMD1-202ENST00000440097 GOLGA8QA0A0J9YX86 632 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 A0A0U1RQS6 177 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 GOLGA8OA6NCC3 632 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 GOLGA8NF8WBI6 632 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 LTA4HP09960 611 aaKnown RBP14.1□□□□□ -0.15
LIMD1-202ENST00000440097 CSRP3P50461 194 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 CDKN2DP55273 166 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 KLF10Q13118 480 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 PTPRRQ15256 657 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 GPR158Q5T848 1215 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 BORAQ6PGQ7 559 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 TICAM1Q8IUC6 712 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 KREMEN2Q8NCW0 462 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 SLC22A17Q8WUG5 538 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 PHF21BQ96EK2 531 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 CDKN2AIPNLQ96HQ2 116 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 TRIB3Q96RU7 358 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 TMEM106CQ9BVX2 250 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 CDH19Q9H159 772 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 CCDC68Q9H2F9 335 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.1□□□□□ -0.15
LIMD1-202ENST00000440097 STK39Q9UEW8 545 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 VPS51Q9UID3 782 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 PCDHB9Q9Y5E1 797 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 AK5Q9Y6K8 562 aa14.1□□□□□ -0.15
LIMD1-202ENST00000440097 ANAPC1Q9H1A4 1944 aa14.09□□□□□ -0.15
LIMD1-202ENST00000440097 K7ERQ8 282 aa14.09□□□□□ -0.15
LIMD1-202ENST00000440097 AIM2O14862 343 aa14.09□□□□□ -0.15
LIMD1-202ENST00000440097 BNIP3LO60238 219 aa14.09□□□□□ -0.15
LIMD1-202ENST00000440097 MT-CO1P00395 513 aa14.09□□□□□ -0.15
LIMD1-202ENST00000440097 FGBP02675 491 aa14.09□□□□□ -0.15
LIMD1-202ENST00000440097 PLPP4Q5VZY2 271 aa14.09□□□□□ -0.15
LIMD1-202ENST00000440097 CCDC149Q6ZUS6 474 aa14.09□□□□□ -0.15
LIMD1-202ENST00000440097 BBS7Q8IWZ6 715 aa14.09□□□□□ -0.15
LIMD1-202ENST00000440097 LILRA2Q8N149 483 aa14.09□□□□□ -0.15
LIMD1-202ENST00000440097 ADAMTS19Q8TE59 1207 aa14.09□□□□□ -0.15
LIMD1-202ENST00000440097 SH3RF2Q8TEC5 729 aa14.09□□□□□ -0.15
LIMD1-202ENST00000440097 PPP1R14BQ96C90 147 aa14.09□□□□□ -0.15
LIMD1-202ENST00000440097 GPR78Q96P69 363 aa14.09□□□□□ -0.15
LIMD1-202ENST00000440097 ALG9Q9H6U8 611 aa14.09□□□□□ -0.15
LIMD1-202ENST00000440097 LIN28AQ9H9Z2 209 aaKnown RBP14.09□□□□□ -0.15
LIMD1-202ENST00000440097 IL23AQ9NPF7 189 aa14.09□□□□□ -0.15
LIMD1-202ENST00000440097 THEGQ9P2T0 379 aa14.09□□□□□ -0.15
LIMD1-202ENST00000440097 TDRKHQ9Y2W6 561 aaKnown RBP14.09□□□□□ -0.15
LIMD1-202ENST00000440097 ALOX15P16050 662 aaPredicted RBP14.09□□□□□ -0.15
LIMD1-202ENST00000440097 EN2P19622 333 aaPredicted RBP14.09□□□□□ -0.15
LIMD1-202ENST00000440097 CR2P20023 1033 aa14.09□□□□□ -0.15
LIMD1-202ENST00000440097 NUDT2P50583 147 aa14.09□□□□□ -0.15
LIMD1-202ENST00000440097 PLOD1Q02809 727 aaPredicted RBP14.09□□□□□ -0.15
LIMD1-202ENST00000440097 FLOT2Q14254 428 aa14.09□□□□□ -0.15
LIMD1-202ENST00000440097 SEMA3AQ14563 771 aa14.09□□□□□ -0.15
LIMD1-202ENST00000440097 MDGA1Q8NFP4 955 aa14.09□□□□□ -0.15
LIMD1-202ENST00000440097 ANKRD49Q8WVL7 239 aa14.09□□□□□ -0.15
LIMD1-202ENST00000440097 DRC3Q9H069 523 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms