RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 PIANPQ8IYJ0 282 aa13.48□□□□□ -0.25
HERPUD1-204ENST00000439977 FIBCD1Q8N539 461 aa13.48□□□□□ -0.25
HERPUD1-204ENST00000439977 DDI1Q8WTU0 396 aa13.48□□□□□ -0.25
HERPUD1-204ENST00000439977 TCF12Q99081 682 aa13.48□□□□□ -0.25
HERPUD1-204ENST00000439977 GPATCH1Q9BRR8 931 aaKnown RBP13.48□□□□□ -0.25
HERPUD1-204ENST00000439977 CCDC68Q9H2F9 335 aa13.48□□□□□ -0.25
HERPUD1-204ENST00000439977 ZNF225Q9UK10 706 aa13.48□□□□□ -0.25
HERPUD1-204ENST00000439977 CNOT11Q9UKZ1 510 aaKnown RBP13.48□□□□□ -0.25
HERPUD1-204ENST00000439977 PCDHB5Q9Y5E4 795 aa13.48□□□□□ -0.25
HERPUD1-204ENST00000439977 ARPC2O15144 300 aa13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 NDUFS3O75489 264 aa13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 TRMUO75648 421 aaKnown RBP13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 RANBP1P43487 201 aa13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 RBBP7Q16576 425 aa13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 C18orf21Q32NC0 220 aaPredicted RBP13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 LRRC23Q53EV4 343 aaPredicted RBP13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 KANK2Q63ZY3 851 aa13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 LPCAT2Q7L5N7 544 aa13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 GLT6D1Q7Z4J2 308 aa13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 RALGPS2Q86X27 583 aaPredicted RBP13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 CPNE9Q8IYJ1 553 aa13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 DCP1BQ8IZD4 617 aaKnown RBP13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 CDYL2Q8N8U2 506 aa13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 MDGA1Q8NFP4 955 aa13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 TOP1MTQ969P6 601 aa13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 ROPN1LQ96C74 230 aa13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 GPR62Q9BZJ7 368 aa13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 PREBQ9HCU5 417 aa13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 CCM2LQ9NUG4 571 aaPredicted RBP13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 TMX2-CTNND1H3BSU7 103 aa13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 DLGAP1O14490 977 aa13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 YAP1P46937 504 aaKnown RBP13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 GATMP50440 423 aa13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 DUSP4Q13115 394 aa13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 RSPO2Q6UXX9 243 aaPredicted RBP13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 SYVN1Q86TM6 617 aa13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 ZNF598Q86UK7 904 aaKnown RBP13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 STAG3L4Q8TBR4 150 aa13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 TFAP2CQ92754 450 aa13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 DCUN1D5Q9BTE7 237 aa13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 RRAGCQ9HB90 399 aa13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 SDR39U1Q9NRG7 319 aaPredicted RBP13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 INTS7Q9NVH2 962 aaKnown RBP13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 PLK2Q9NYY3 685 aa13.47□□□□□ -0.25
HERPUD1-204ENST00000439977 IGLV3-10A0A075B6K4 115 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 ANKRD33BA6NCL7 494 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 TLR5O60602 858 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 PRAMEF11O60813 436 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 FGF4P08620 206 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 PSMA4P25789 261 aaKnown RBP13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 SLC6A4P31645 630 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 NFKB2Q00653 900 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 NRG1Q02297 640 aaPredicted RBP13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 LCP2Q13094 533 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 PLCL1Q15111 1095 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 PSAPL1Q6NUJ1 521 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 TTC33Q6PID6 262 aaPredicted RBP13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 LINGO4Q6UY18 593 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 ZBTB46Q86UZ6 589 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 LPCAT1Q8NF37 534 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 OR52B6Q8NGF0 335 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 OR2T11Q8NH01 316 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 EEF1AKMT1Q8WVE0 214 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 FUBP1Q96AE4 644 aaKnown RBP13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 FAM193BQ96PV7 902 aaPredicted RBP13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 HGH1Q9BTY7 390 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 PNPLA3Q9NST1 481 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 TAS2R13Q9NYV9 303 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 RSL24D1Q9UHA3 163 aaKnown RBP13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 ASPDHA6ND91 283 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 GOLGA8CPA6NN73 597 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 EI24O14681 340 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 OAZ2O95190 189 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 FGF1P05230 155 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 CDK4P11802 303 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 BMP1P13497 986 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 ZNF23P17027 643 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 HLA-DPA1P20036 260 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 IL10P22301 178 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 GSK3BP49841 420 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 CRHR2Q13324 411 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 TRIP4Q15650 581 aaPredicted RBP13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 NFE2Q16621 373 aaPredicted RBP13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 USP41Q3LFD5 358 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 ANKS6Q68DC2 871 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 PPP4R4Q6NUP7 873 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 MAGEE2Q8TD90 523 aaPredicted RBP13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 BHMTQ93088 406 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 HAUS8Q9BT25 410 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 NACA2Q9H009 215 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 ALG2Q9H553 416 aa13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 EIF2B4Q9UI10 523 aaKnown RBP13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 ZFP37Q9Y6Q3 630 aaPredicted RBP13.46□□□□□ -0.25
HERPUD1-204ENST00000439977 CBX4O00257 560 aa13.46□□□□□ -0.26
HERPUD1-204ENST00000439977 OR4F21O95013 312 aa13.46□□□□□ -0.26
HERPUD1-204ENST00000439977 CYBBP04839 570 aa13.46□□□□□ -0.26
HERPUD1-204ENST00000439977 BMP2P12643 396 aa13.46□□□□□ -0.26
HERPUD1-204ENST00000439977 CYBAP13498 195 aa13.46□□□□□ -0.26
HERPUD1-204ENST00000439977 TACR2P21452 398 aa13.46□□□□□ -0.26
HERPUD1-204ENST00000439977 FASP25445 335 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms