RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 JRKO75564 520 aa8.54□□□□□ -1.04
HPS4-206ENST00000439453 FCGR1AP12314 374 aa8.54□□□□□ -1.04
HPS4-206ENST00000439453 YWHAQP27348 245 aa8.54□□□□□ -1.04
HPS4-206ENST00000439453 ELK4P28324 431 aa8.54□□□□□ -1.04
HPS4-206ENST00000439453 OCA2Q04671 838 aa8.54□□□□□ -1.04
HPS4-206ENST00000439453 BROXQ5VW32 411 aa8.54□□□□□ -1.04
HPS4-206ENST00000439453 KCTD11Q693B1 232 aa8.54□□□□□ -1.04
HPS4-206ENST00000439453 GTF2IRD2BQ6EKJ0 949 aa8.54□□□□□ -1.04
HPS4-206ENST00000439453 NEPROQ6NW34 567 aa8.54□□□□□ -1.04
HPS4-206ENST00000439453 AGMOQ6ZNB7 445 aa8.54□□□□□ -1.04
HPS4-206ENST00000439453 CUZD1Q86UP6 607 aa8.54□□□□□ -1.04
HPS4-206ENST00000439453 GTF2IRD2Q86UP8 949 aa8.54□□□□□ -1.04
HPS4-206ENST00000439453 USP33Q8TEY7 942 aa8.54□□□□□ -1.04
HPS4-206ENST00000439453 TIFAQ96CG3 184 aa8.54□□□□□ -1.04
HPS4-206ENST00000439453 RAD9AQ99638 391 aa8.54□□□□□ -1.04
HPS4-206ENST00000439453 CGREF1Q99674 301 aa8.54□□□□□ -1.04
HPS4-206ENST00000439453 HOPXQ9BPY8 73 aaPredicted RBP8.54□□□□□ -1.04
HPS4-206ENST00000439453 HGH1Q9BTY7 390 aa8.54□□□□□ -1.04
HPS4-206ENST00000439453 MLPHQ9BV36 600 aaPredicted RBP8.54□□□□□ -1.04
HPS4-206ENST00000439453 KLHL25Q9H0H3 589 aa8.54□□□□□ -1.04
HPS4-206ENST00000439453 CWH43Q9H720 699 aa8.54□□□□□ -1.04
HPS4-206ENST00000439453 EML4Q9HC35 981 aaKnown RBP8.54□□□□□ -1.04
HPS4-206ENST00000439453 TMPRSS4Q9NRS4 437 aa8.54□□□□□ -1.04
HPS4-206ENST00000439453 ABCD2Q9UBJ2 740 aa8.54□□□□□ -1.04
HPS4-206ENST00000439453 PIN4Q9Y237 131 aaKnown RBP8.54□□□□□ -1.04
HPS4-206ENST00000439453 TRAF6Q9Y4K3 522 aa8.54□□□□□ -1.04
HPS4-206ENST00000439453 TMEM265A0A087WTH1 108 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 TTC24A2A3L6 582 aaPredicted RBP8.53□□□□□ -1.04
HPS4-206ENST00000439453 INPPL1O15357 1258 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 MT-CO1P00395 513 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 HSD17B1P14061 328 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 GFAPP14136 432 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 STMN1P16949 149 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 GSSP48637 474 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 RAD23AP54725 363 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 STX1BP61266 288 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 XAF1Q6GPH4 301 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 PRMT9Q6P2P2 845 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 RPS27LQ71UM5 84 aaKnown RBP8.53□□□□□ -1.04
HPS4-206ENST00000439453 MFSD6LQ8IWD5 586 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 TTC39CQ8N584 583 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 CLP1Q92989 425 aaKnown RBP8.53□□□□□ -1.04
HPS4-206ENST00000439453 HERC2P3Q9BVR0 1158 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 RNF39Q9H2S5 420 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 CYP4F12Q9HCS2 524 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 TMEM161AQ9NX61 479 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 MAP10Q9P2G4 905 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 TNFSF13BQ9Y275 285 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 ZFC3H1O60293 1989 aaKnown RBP8.53□□□□□ -1.04
HPS4-206ENST00000439453 FAM95CA0A1B0GW59 222 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 BBIP1A8MTZ0 92 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 ARPC2O15144 300 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 ZBTB24O43167 697 aaPredicted RBP8.53□□□□□ -1.04
HPS4-206ENST00000439453 ZNF623O75123 536 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 GPIP06744 558 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 ALOX5P09917 674 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 LCP1P13796 627 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 ATP4BP51164 291 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 GRIN2CQ14957 1233 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 SPCS2Q15005 226 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 AGAP7PQ5VUJ5 663 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 STRADAQ7RTN6 431 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 MINDY2Q8NBR6 621 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 HEXDCQ8WVB3 486 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 LPPQ93052 612 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 GBA3Q9H227 469 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 MTIF3Q9H2K0 278 aaKnown RBP8.53□□□□□ -1.04
HPS4-206ENST00000439453 FBRSL1Q9HCM7 1045 aaKnown RBP8.53□□□□□ -1.04
HPS4-206ENST00000439453 HMG20AQ9NP66 347 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 FAM105AQ9NUU6 356 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.53□□□□□ -1.04
HPS4-206ENST00000439453 MRPL42Q9Y6G3 142 aaKnown RBP8.53□□□□□ -1.04
HPS4-206ENST00000439453 DGKBQ9Y6T7 804 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 NR5A2O00482 541 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 GPX3P22352 226 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 ARCN1P48444 511 aaKnown RBP8.53□□□□□ -1.04
HPS4-206ENST00000439453 PAFAH1B3Q15102 231 aaKnown RBP8.53□□□□□ -1.04
HPS4-206ENST00000439453 PCBP1Q15365 356 aaKnown RBP eCLIP8.53□□□□□ -1.04
HPS4-206ENST00000439453 CYP51A1Q16850 503 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 FAM219BQ5XKK7 198 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 CATSPER4Q7RTX7 472 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 FAM35AQ86V20 835 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 TPK1Q9H3S4 243 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 CMTM6Q9NX76 183 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 VWA7Q9Y334 891 aa8.53□□□□□ -1.04
HPS4-206ENST00000439453 ATP6AP2A0A1C7CYW4 349 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 DYTNA2CJ06 578 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 ERI2A8K979 691 aaKnown RBP8.52□□□□□ -1.04
HPS4-206ENST00000439453 H0YAE9 185 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 INPP4BO15327 924 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 TLL1O43897 1013 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 ABCB7O75027 752 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 ATP6AP2O75787 350 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 AXLP30530 894 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 CD68P34810 354 aaPredicted RBP8.52□□□□□ -1.04
HPS4-206ENST00000439453 PCYT1AP49585 367 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 PLA2G16P53816 162 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 RBP5P82980 135 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 AQP6Q13520 282 aa8.52□□□□□ -1.04
HPS4-206ENST00000439453 CAPRIN1Q14444 709 aaKnown RBP8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms