RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 ANKRD36A6QL64 1941 aa16.33■□□□□ 0.2
CLCNKA-203ENST00000439316 LRRC14BA6NHZ5 514 aa16.33■□□□□ 0.2
CLCNKA-203ENST00000439316 B4GALT3O60512 393 aa16.33■□□□□ 0.2
CLCNKA-203ENST00000439316 GLP2RO95838 553 aa16.33■□□□□ 0.2
CLCNKA-203ENST00000439316 LBPP18428 481 aa16.33■□□□□ 0.2
CLCNKA-203ENST00000439316 LBX1P52954 281 aa16.33■□□□□ 0.2
CLCNKA-203ENST00000439316 TBX4P57082 545 aa16.33■□□□□ 0.2
CLCNKA-203ENST00000439316 SEMA3AQ14563 771 aa16.33■□□□□ 0.2
CLCNKA-203ENST00000439316 LPCAT2Q7L5N7 544 aa16.33■□□□□ 0.2
CLCNKA-203ENST00000439316 ZNF280BQ86YH2 543 aa16.33■□□□□ 0.2
CLCNKA-203ENST00000439316 CAMK1DQ8IU85 385 aa16.33■□□□□ 0.2
CLCNKA-203ENST00000439316 CBR4Q8N4T8 237 aa16.33■□□□□ 0.2
CLCNKA-203ENST00000439316 SEPT8Q92599 483 aa16.33■□□□□ 0.2
CLCNKA-203ENST00000439316 TFB2MQ9H5Q4 396 aaKnown RBP16.33■□□□□ 0.2
CLCNKA-203ENST00000439316 SLC52A3Q9NQ40 469 aa16.33■□□□□ 0.2
CLCNKA-203ENST00000439316 SMOXQ9NWM0 555 aa16.33■□□□□ 0.2
CLCNKA-203ENST00000439316 TMEM161AQ9NX61 479 aa16.33■□□□□ 0.2
CLCNKA-203ENST00000439316 TUBA8Q9NY65 449 aaPredicted RBP16.33■□□□□ 0.2
CLCNKA-203ENST00000439316 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.33■□□□□ 0.2
CLCNKA-203ENST00000439316 ACTR3BQ9P1U1 418 aa16.33■□□□□ 0.2
CLCNKA-203ENST00000439316 POLG2Q9UHN1 485 aa16.33■□□□□ 0.2
CLCNKA-203ENST00000439316 F8W810 466 aa16.32■□□□□ 0.2
CLCNKA-203ENST00000439316 H3BMM5 538 aa16.32■□□□□ 0.2
CLCNKA-203ENST00000439316 CD3EAPO15446 510 aaKnown RBP16.32■□□□□ 0.2
CLCNKA-203ENST00000439316 RPP40O75818 363 aaKnown RBP16.32■□□□□ 0.2
CLCNKA-203ENST00000439316 OR4Q2P0C623 313 aa16.32■□□□□ 0.2
CLCNKA-203ENST00000439316 COL6A1P12109 1028 aa16.32■□□□□ 0.2
CLCNKA-203ENST00000439316 MYF6P23409 242 aa16.32■□□□□ 0.2
CLCNKA-203ENST00000439316 SLC6A2P23975 617 aa16.32■□□□□ 0.2
CLCNKA-203ENST00000439316 PFKFB4Q16877 469 aa16.32■□□□□ 0.2
CLCNKA-203ENST00000439316 MRNIPQ6NTE8 343 aa16.32■□□□□ 0.2
CLCNKA-203ENST00000439316 MON1AQ86VX9 555 aa16.32■□□□□ 0.2
CLCNKA-203ENST00000439316 SPPL2CQ8IUH8 684 aa16.32■□□□□ 0.2
CLCNKA-203ENST00000439316 SCN4BQ8IWT1 228 aa16.32■□□□□ 0.2
CLCNKA-203ENST00000439316 ADGRG5Q8IZF4 528 aa16.32■□□□□ 0.2
CLCNKA-203ENST00000439316 RYBPQ8N488 228 aaPredicted RBP16.32■□□□□ 0.2
CLCNKA-203ENST00000439316 ARMC5Q96C12 935 aa16.32■□□□□ 0.2
CLCNKA-203ENST00000439316 MYRFLQ96LU7 910 aa16.32■□□□□ 0.2
CLCNKA-203ENST00000439316 TOX2Q96NM4 488 aa16.32■□□□□ 0.2
CLCNKA-203ENST00000439316 NSUN5Q96P11 429 aaKnown RBP16.32■□□□□ 0.2
CLCNKA-203ENST00000439316 GID8Q9NWU2 228 aa16.32■□□□□ 0.2
CLCNKA-203ENST00000439316 CIDEBQ9UHD4 219 aa16.32■□□□□ 0.2
CLCNKA-203ENST00000439316 AURKCQ9UQB9 309 aa16.32■□□□□ 0.2
CLCNKA-203ENST00000439316 LAMA2P24043 3122 aaKnown RBP16.32■□□□□ 0.2
CLCNKA-203ENST00000439316 CCDC162PA2VCL2 907 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 FGF1P05230 155 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 HLA-DPA1P20036 260 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 OGNP20774 298 aaKnown RBP16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 PSMA4P25789 261 aaKnown RBP16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 MRPL19P49406 292 aaKnown RBP16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 PLOD1Q02809 727 aaPredicted RBP16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 IL10RBQ08334 325 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 CAPRIN1Q14444 709 aaKnown RBP16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 ATP6AP1Q15904 470 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 GEN1Q17RS7 908 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 BLOC1S3Q6QNY0 202 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 DDIASQ8IXT1 998 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 TNIP2Q8NFZ5 429 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 LRRC58Q96CX6 371 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 BIRC8Q96P09 236 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 KCNA7Q96RP8 456 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 AARSD1Q9BTE6 412 aaKnown RBP16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 PTBP2Q9UKA9 531 aaKnown RBP16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 PCDHB8Q9UN66 801 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 ATP11BQ9Y2G3 1177 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 PCDHA9Q9Y5H5 950 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 ARL5AQ9Y689 179 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 TRIM64A6NGJ6 449 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 ARPC2O15144 300 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 KERAO60938 352 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 VPS4BO75351 444 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 HGFP14210 728 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 IDO1P14902 403 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 UGT1A6P19224 532 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 IL10P22301 178 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 FASP25445 335 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 GJA8P48165 433 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 EMP3P54852 163 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 CDH15P55291 814 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 YWHAHQ04917 246 aaPredicted RBP16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 LCP2Q13094 533 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 DCTN2Q13561 401 aaKnown RBP16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 TYSND1Q2T9J0 566 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 SLC39A12Q504Y0 691 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 OGFOD2Q6N063 350 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 ZNF354CQ86Y25 554 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 TSPEARQ8WU66 669 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 IGSF8Q969P0 613 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 TUBGCP3Q96CW5 907 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 CENPNQ96H22 339 aaPredicted RBP16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 C9orf16Q9BUW7 83 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 ADI1Q9BV57 179 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 TRIM54Q9BYV2 358 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 MUC13Q9H3R2 512 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 PREBQ9HCU5 417 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 EGFL7Q9UHF1 273 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 RIMKLBQ9ULI2 386 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 PCDHB7Q9Y5E2 793 aa16.31■□□□□ 0.2
CLCNKA-203ENST00000439316 A0A087WXM4 84 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 C9JVG2 144 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms