RNA–Protein interactions for RNA: ENST00000439079.1

LINC00415-201, long intergenic non-protein coding RNA 415, humanhuman

TSL 3 BASIC

Gene LINC00415, Length 435 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00415-201ENST00000439079 DNMT3BQ9UBC3 853 aaKnown RBP4.74□□□□□ -1.65
LINC00415-201ENST00000439079 HDAC6Q9UBN7 1215 aa4.74□□□□□ -1.65
LINC00415-201ENST00000439079 SPASTQ9UBP0 616 aa4.74□□□□□ -1.65
LINC00415-201ENST00000439079 DBF4Q9UBU7 674 aaPredicted RBP4.74□□□□□ -1.65
LINC00415-201ENST00000439079 TRIM10Q9UDY6 481 aa4.74□□□□□ -1.65
LINC00415-201ENST00000439079 STK17AQ9UEE5 414 aa4.74□□□□□ -1.65
LINC00415-201ENST00000439079 UBE2J1Q9Y385 318 aaPredicted RBP4.74□□□□□ -1.65
LINC00415-201ENST00000439079 STRAPQ9Y3F4 350 aaKnown RBP4.74□□□□□ -1.65
LINC00415-201ENST00000439079 RWDD3Q9Y3V2 267 aa4.74□□□□□ -1.65
LINC00415-201ENST00000439079 CDK5RAP2Q96SN8 1893 aa4.74□□□□□ -1.65
LINC00415-201ENST00000439079 TTC41PQ6P2S7 1318 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 CACNA1BQ00975 2339 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 LOC102723996A0A087X1L8 192 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 A0A0G2JLL6 359 aaPredicted RBP4.73□□□□□ -1.65
LINC00415-201ENST00000439079 EDDM13A0A1B0GTR0 161 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 GOLGA6L7A0A1B0GV03 622 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 ARHGAP42A6NI28 874 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 SDR42E2A6NKP2 422 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 ADAMDEC1O15204 470 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 CACNG3O60359 315 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 PEX10O60683 326 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 PPP1R11O60927 126 aaPredicted RBP4.73□□□□□ -1.65
LINC00415-201ENST00000439079 ZC3H11AO75152 810 aaKnown RBP eCLIP4.73□□□□□ -1.65
LINC00415-201ENST00000439079 ALDH1A2O94788 518 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 AKR7A3O95154 331 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 PDGFBP01127 241 aaPredicted RBP4.73□□□□□ -1.65
LINC00415-201ENST00000439079 GBAP04062 536 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 CSF2P04141 144 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 ENO1P06733 434 aaKnown RBP4.73□□□□□ -1.65
LINC00415-201ENST00000439079 SRPRAP08240 638 aaKnown RBP4.73□□□□□ -1.65
LINC00415-201ENST00000439079 CYC1P08574 325 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 NCF1P14598 390 aaPredicted RBP4.73□□□□□ -1.65
LINC00415-201ENST00000439079 CDH3P22223 829 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 DNAJB1P25685 340 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 RPA1P27694 616 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 PSMA5P28066 241 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 OTX2P32243 289 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 CHRNA3P32297 505 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 MC5RP33032 325 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 KIR2DL1P43626 348 aaPredicted RBP4.73□□□□□ -1.65
LINC00415-201ENST00000439079 KIR2DL2P43627 348 aaPredicted RBP4.73□□□□□ -1.65
LINC00415-201ENST00000439079 GABRB2P47870 512 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 DHPSP49366 369 aaPredicted RBP4.73□□□□□ -1.65
LINC00415-201ENST00000439079 NDUFV1P49821 464 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 ARHGAP8P85298 464 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 ATP2C1P98194 919 aaPredicted RBP4.73□□□□□ -1.65
LINC00415-201ENST00000439079 TFAP4Q01664 338 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 PTH1RQ03431 593 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 SLFN5Q08AF3 891 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 CCDC173Q0VFZ6 552 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 TCF15Q12870 199 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 DOC2BQ14184 412 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 LPIN1Q14693 890 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 HADHQ16836 314 aaKnown RBP4.73□□□□□ -1.65
LINC00415-201ENST00000439079 PCGF3Q3KNV8 242 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 ZSCAN23Q3MJ62 389 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 AARDQ4LEZ3 155 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 RUNDC3AQ59EK9 446 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 NKAPLQ5M9Q1 402 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 CACHD1Q5VU97 1274 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 KANK2Q63ZY3 851 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 TMEM81Q6P7N7 255 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 ZCCHC12Q6PEW1 402 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 SYNE3Q6ZMZ3 975 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 CAMKMTQ7Z624 323 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 SIAH3Q8IW03 269 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 RBM12BQ8IXT5 1001 aaKnown RBP4.73□□□□□ -1.65
LINC00415-201ENST00000439079 PM20D2Q8IYS1 436 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 MMP21Q8N119 569 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 RASGEF1CQ8N431 466 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 GUF1Q8N442 669 aaKnown RBP4.73□□□□□ -1.65
LINC00415-201ENST00000439079 ANKRD13CQ8N6S4 541 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 OR8K5Q8NH50 307 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 ST7LQ8TDW4 575 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 PTPMT1Q8WUK0 201 aaPredicted RBP4.73□□□□□ -1.65
LINC00415-201ENST00000439079 DHX58Q96C10 678 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 MRPL38Q96DV4 380 aaKnown RBP4.73□□□□□ -1.65
LINC00415-201ENST00000439079 EDC3Q96F86 508 aaKnown RBP4.73□□□□□ -1.65
LINC00415-201ENST00000439079 ATP6V1G3Q96LB4 118 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 SAMD8Q96LT4 415 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 ADAD1Q96M93 576 aaKnown RBP4.73□□□□□ -1.65
LINC00415-201ENST00000439079 KLHL15Q96M94 604 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 NSMCE2Q96MF7 247 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 ZBTB18Q99592 522 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 INPP5KQ9BT40 448 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 G6PC3Q9BUM1 346 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 AMNQ9BXJ7 453 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 CACNG6Q9BXT2 260 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 PUS3Q9BZE2 481 aaKnown RBP4.73□□□□□ -1.65
LINC00415-201ENST00000439079 RTN4RQ9BZR6 473 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 EPHX3Q9H6B9 360 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 NGBQ9NPG2 151 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 HOMER3Q9NSC5 361 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 TRNAU1APQ9NX07 287 aaKnown RBP4.73□□□□□ -1.65
LINC00415-201ENST00000439079 HYPKQ9NX55 129 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 IL20Q9NYY1 176 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 VPS51Q9UID3 782 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 NUDT5Q9UKK9 219 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 TSPAN16Q9UKR8 245 aa4.73□□□□□ -1.65
LINC00415-201ENST00000439079 SPACA6W5XKT8 324 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms