RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 MIOSQ9NXC5 875 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 CA12O43570 354 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 BANF1O75531 89 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 OR4K2Q8NGD2 314 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 WDR60Q8WVS4 1066 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 MTRRQ9UBK8 725 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 GULP1Q9UBP9 304 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 C15orf41Q9Y2V0 281 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 JAM2P57087 298 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 DPYSQ14117 519 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 PRRG4Q9BZD6 226 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 CCNB1IP1Q9NPC3 277 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 ALPPL2P10696 532 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 GNA12Q03113 381 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 BST1Q10588 318 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 RFTN1Q14699 578 aaPredicted RBP15.8■□□□□ 0.12
PTPN13-204ENST00000436978 ACAP2Q15057 778 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 CUZD1Q86UP6 607 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 KREMEN1Q96MU8 473 aa15.8■□□□□ 0.12
PTPN13-204ENST00000436978 HNRNPABQ99729 332 aaKnown RBP15.8■□□□□ 0.12
PTPN13-204ENST00000436978 LRATO95237 230 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 RASGRP1O95267 797 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 LARS2Q15031 903 aaKnown RBP15.79■□□□□ 0.12
PTPN13-204ENST00000436978 VARS2Q5ST30 1063 aaKnown RBP15.79■□□□□ 0.12
PTPN13-204ENST00000436978 LRTM1Q9HBL6 345 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 WTIPA6NIX2 430 aaPredicted RBP15.79■□□□□ 0.12
PTPN13-204ENST00000436978 MFSD11O43934 449 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 SNX3O60493 162 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 TSC22D2O75157 780 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 LRIG2O94898 1065 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 C8GP07360 202 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 SP100P23497 879 aaPredicted RBP15.79■□□□□ 0.12
PTPN13-204ENST00000436978 IL12RB1P42701 662 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 ARHGAP36Q6ZRI8 547 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 PLLPQ9Y342 182 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 LOC100506127A0A0U1RQW1 187 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 POU5F1Q01860 360 aaKnown RBP15.79■□□□□ 0.12
PTPN13-204ENST00000436978 KLHL24Q6TFL4 600 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 PCED1BQ96HM7 432 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 CDADC1Q9BWV3 514 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 EIF2B3Q9NR50 452 aaKnown RBP15.79■□□□□ 0.12
PTPN13-204ENST00000436978 ERAL1O75616 437 aaKnown RBP15.79■□□□□ 0.12
PTPN13-204ENST00000436978 IPO13O94829 963 aaKnown RBP15.79■□□□□ 0.12
PTPN13-204ENST00000436978 CCNE2O96020 404 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 PBX3P40426 434 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 GAD2Q05329 585 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 C11orf84Q9BUA3 381 aaPredicted RBP15.79■□□□□ 0.12
PTPN13-204ENST00000436978 DGCR6LQ9BY27 220 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 PIGUQ9H490 435 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 CKLFQ9UBR5 152 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 UNCXA6NJT0 531 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 MATN3O15232 486 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 KHDRBS3O75525 346 aaKnown RBP15.79■□□□□ 0.12
PTPN13-204ENST00000436978 MYBPC1Q00872 1141 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.79■□□□□ 0.12
PTPN13-204ENST00000436978 OR14C36Q8NHC7 312 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 RHBDL2Q9NX52 303 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 RPL26L1Q9UNX3 145 aaKnown RBP15.79■□□□□ 0.12
PTPN13-204ENST00000436978 KCNU1A8MYU2 1149 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 CLDN4O14493 209 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 ZNF280AP59817 542 aaPredicted RBP15.79■□□□□ 0.12
PTPN13-204ENST00000436978 ZSWIM7Q19AV6 140 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 NAIF1Q69YI7 327 aaPredicted RBP15.79■□□□□ 0.12
PTPN13-204ENST00000436978 OR6K2Q8NGY2 324 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 RNPEPL1Q9HAU8 725 aa15.79■□□□□ 0.12
PTPN13-204ENST00000436978 POLMQ9NP87 494 aaPredicted RBP15.79■□□□□ 0.12
PTPN13-204ENST00000436978 FPGTO14772 594 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 MAGEB3O15480 346 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 UGT2B4P06133 528 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 L1CAMP32004 1257 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 IL10RBQ08334 325 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 PARGQ86W56 976 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 FBXW8Q8N3Y1 598 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 AMER2Q8N7J2 671 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 LEMD2Q8NC56 503 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 TNFRSF25Q93038 417 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 FEM1CQ96JP0 617 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 CNPPD1Q9BV87 410 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 GOLGA2P5Q9HBQ8 144 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 DNAJC28Q9NX36 388 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 PPP1R11O60927 126 aaPredicted RBP15.78■□□□□ 0.12
PTPN13-204ENST00000436978 HNF4AP41235 474 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 TRIM63Q969Q1 353 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 PRICKLE1Q96MT3 831 aaPredicted RBP15.78■□□□□ 0.12
PTPN13-204ENST00000436978 FAM86C2PA6NEL3 165 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 UGT2B11O75310 529 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 ZNF37AP17032 561 aaPredicted RBP15.78■□□□□ 0.12
PTPN13-204ENST00000436978 SLC44A1Q8WWI5 657 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 ABI3Q9P2A4 366 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 DDX60Q8IY21 1712 aaKnown RBP15.78■□□□□ 0.12
PTPN13-204ENST00000436978 ABHD14A-ACY1A0A1B0GW23 586 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 ASLP04424 464 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 HNRNPLP14866 589 aaKnown RBP eCLIP15.78■□□□□ 0.12
PTPN13-204ENST00000436978 CCNFP41002 786 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 FUT2Q10981 343 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 DHDDSQ86SQ9 333 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 HAPLN3Q96S86 360 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 COPS7AQ9UBW8 275 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 SLC38A8A6NNN8 435 aa15.78■□□□□ 0.12
PTPN13-204ENST00000436978 LILRA4P59901 499 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms