RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 ZNF789Q5FWF6 425 aa22.87■■□□□ 1.25
CPSF4-204ENST00000436336 MROH9Q5TGP6 573 aa22.87■■□□□ 1.25
CPSF4-204ENST00000436336 NLRP8Q86W28 1048 aa22.87■■□□□ 1.25
CPSF4-204ENST00000436336 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.87■■□□□ 1.25
CPSF4-204ENST00000436336 TLCD1Q96CP7 247 aa22.87■■□□□ 1.25
CPSF4-204ENST00000436336 HHIPQ96QV1 700 aa22.87■■□□□ 1.25
CPSF4-204ENST00000436336 RIOK2Q9BVS4 552 aaKnown RBP22.87■■□□□ 1.25
CPSF4-204ENST00000436336 EBF1Q9UH73 591 aa22.87■■□□□ 1.25
CPSF4-204ENST00000436336 HMX2A2RU54 273 aa22.86■■□□□ 1.25
CPSF4-204ENST00000436336 TRIM49D1C9J1S8 452 aa22.86■■□□□ 1.25
CPSF4-204ENST00000436336 GPR39O43194 453 aa22.86■■□□□ 1.25
CPSF4-204ENST00000436336 NDUFS3O75489 264 aa22.86■■□□□ 1.25
CPSF4-204ENST00000436336 IGLV3-19P01714 112 aa22.86■■□□□ 1.25
CPSF4-204ENST00000436336 UGT1A6P19224 532 aa22.86■■□□□ 1.25
CPSF4-204ENST00000436336 UGT1A1P22309 533 aa22.86■■□□□ 1.25
CPSF4-204ENST00000436336 UGT1A4P22310 534 aa22.86■■□□□ 1.25
CPSF4-204ENST00000436336 UGT1A3P35503 534 aa22.86■■□□□ 1.25
CPSF4-204ENST00000436336 UGT1A5P35504 534 aa22.86■■□□□ 1.25
CPSF4-204ENST00000436336 RPS21P63220 83 aaKnown RBP22.86■■□□□ 1.25
CPSF4-204ENST00000436336 DNAJC3Q13217 504 aa22.86■■□□□ 1.25
CPSF4-204ENST00000436336 BMPR2Q13873 1038 aa22.86■■□□□ 1.25
CPSF4-204ENST00000436336 AGERQ15109 404 aa22.86■■□□□ 1.25
CPSF4-204ENST00000436336 ATP13A5Q4VNC0 1218 aa22.86■■□□□ 1.25
CPSF4-204ENST00000436336 KCTD16Q68DU8 428 aa22.86■■□□□ 1.25
CPSF4-204ENST00000436336 CNSTQ6PJW8 725 aa22.86■■□□□ 1.25
CPSF4-204ENST00000436336 TRABD2AQ86V40 505 aa22.86■■□□□ 1.25
CPSF4-204ENST00000436336 SERPINA9Q86WD7 417 aa22.86■■□□□ 1.25
CPSF4-204ENST00000436336 PNPLA1Q8N8W4 532 aa22.86■■□□□ 1.25
CPSF4-204ENST00000436336 ULK4Q96C45 1275 aa22.86■■□□□ 1.25
CPSF4-204ENST00000436336 ATXN7L3BQ96GX2 97 aa22.86■■□□□ 1.25
CPSF4-204ENST00000436336 BTBD1Q9H0C5 482 aa22.86■■□□□ 1.25
CPSF4-204ENST00000436336 CD93Q9NPY3 652 aa22.86■■□□□ 1.25
CPSF4-204ENST00000436336 FAM53CQ9NYF3 392 aa22.86■■□□□ 1.25
CPSF4-204ENST00000436336 CORO1CQ9ULV4 474 aaPredicted RBP22.86■■□□□ 1.25
CPSF4-204ENST00000436336 IGLON5A6NGN9 336 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 H3BQF6 201 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 DCXO43602 365 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 DCNP07585 359 aaKnown RBP22.85■■□□□ 1.25
CPSF4-204ENST00000436336 DPTQ07507 201 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 MTAPQ13126 283 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 FAM124AQ86V42 546 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 NXPE1Q8N323 547 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 UHRF1Q96T88 793 aaPredicted RBP22.85■■□□□ 1.25
CPSF4-204ENST00000436336 GPR22Q99680 433 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 SGK2Q9HBY8 427 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 SMOXQ9NWM0 555 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 SENP1Q9P0U3 644 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 ZFR2Q9UPR6 939 aaKnown RBP22.85■■□□□ 1.25
CPSF4-204ENST00000436336 TBC1D3DA0A087WVF3 549 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 TBC1D3IA0A087WXS9 549 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 TBC1D3EA0A087X179 549 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 TBC1D3KA0A087X1G2 549 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 TBC1D3FA6NER0 549 aaPredicted RBP22.85■■□□□ 1.25
CPSF4-204ENST00000436336 TBC1D3LB9A6J9 549 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 RNGTTO60942 597 aaKnown RBP22.85■■□□□ 1.25
CPSF4-204ENST00000436336 APBB3O95704 486 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 TBC1D3HP0C7X1 549 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 ACRV1P26436 265 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 ABCG1P45844 678 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 CLCN5P51795 746 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 MAP7D1Q3KQU3 841 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 CWF19L1Q69YN2 538 aaKnown RBP22.85■■□□□ 1.25
CPSF4-204ENST00000436336 TBC1D3GQ6DHY5 549 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 TBC1D3CQ6IPX1 549 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 TIFABQ6ZNK6 161 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 TBC1D3Q8IZP1 549 aaPredicted RBP22.85■■□□□ 1.25
CPSF4-204ENST00000436336 LPGAT1Q92604 370 aa22.85■■□□□ 1.25
CPSF4-204ENST00000436336 MTO1Q9Y2Z2 717 aaKnown RBP22.85■■□□□ 1.25
CPSF4-204ENST00000436336 CA5AP35218 305 aa22.84■■□□□ 1.25
CPSF4-204ENST00000436336 PTGER3P43115 390 aa22.84■■□□□ 1.25
CPSF4-204ENST00000436336 POLD2P49005 469 aa22.84■■□□□ 1.25
CPSF4-204ENST00000436336 DBN1Q16643 649 aa22.84■■□□□ 1.25
CPSF4-204ENST00000436336 TMEM259Q4ZIN3 620 aa22.84■■□□□ 1.25
CPSF4-204ENST00000436336 SETMARQ53H47 684 aaPredicted RBP22.84■■□□□ 1.25
CPSF4-204ENST00000436336 SEL1L3Q68CR1 1132 aa22.84■■□□□ 1.25
CPSF4-204ENST00000436336 MTERF4Q7Z6M4 381 aaKnown RBP22.84■■□□□ 1.25
CPSF4-204ENST00000436336 EXOC3L1Q86VI1 746 aa22.84■■□□□ 1.25
CPSF4-204ENST00000436336 HORMAD1Q86X24 394 aa22.84■■□□□ 1.25
CPSF4-204ENST00000436336 DCLK2Q8N568 766 aa22.84■■□□□ 1.25
CPSF4-204ENST00000436336 CAMKK1Q8N5S9 505 aa22.84■■□□□ 1.25
CPSF4-204ENST00000436336 VPS35Q96QK1 796 aa22.84■■□□□ 1.25
CPSF4-204ENST00000436336 CRYL1Q9Y2S2 319 aa22.84■■□□□ 1.25
CPSF4-204ENST00000436336 ACTL7BQ9Y614 415 aa22.84■■□□□ 1.25
CPSF4-204ENST00000436336 PLXND1Q9Y4D7 1925 aa22.83■■□□□ 1.25
CPSF4-204ENST00000436336 FAM95CA0A1B0GW59 222 aa22.83■■□□□ 1.25
CPSF4-204ENST00000436336 A0A1W2PPM1 405 aa22.83■■□□□ 1.25
CPSF4-204ENST00000436336 A0A1W2PQU0 124 aa22.83■■□□□ 1.25
CPSF4-204ENST00000436336 LRRC72A6NJI9 287 aa22.83■■□□□ 1.25
CPSF4-204ENST00000436336 MT-ND3P03897 115 aa22.83■■□□□ 1.25
CPSF4-204ENST00000436336 ACSL1P33121 698 aa22.83■■□□□ 1.25
CPSF4-204ENST00000436336 ADARP55265 1226 aaKnown RBP22.83■■□□□ 1.25
CPSF4-204ENST00000436336 MAGOHP61326 146 aaKnown RBP22.83■■□□□ 1.25
CPSF4-204ENST00000436336 ITIH4Q14624 930 aa22.83■■□□□ 1.25
CPSF4-204ENST00000436336 OR2T34Q8NGX1 318 aa22.83■■□□□ 1.25
CPSF4-204ENST00000436336 C1QTNF2Q9BXJ5 285 aa22.83■■□□□ 1.25
CPSF4-204ENST00000436336 PIKFYVEQ9Y2I7 2098 aa22.83■■□□□ 1.25
CPSF4-204ENST00000436336 UBA6A0AVT1 1052 aaPredicted RBP22.82■■□□□ 1.24
CPSF4-204ENST00000436336 PRR23AA6NEV1 266 aa22.82■■□□□ 1.24
CPSF4-204ENST00000436336 FADS2P1A8MWK0 482 aa22.82■■□□□ 1.24
CPSF4-204ENST00000436336 FOXO6A8MYZ6 492 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms