RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 KCNAB2Q13303 367 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 DAG1Q14118 895 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 ILDR2Q71H61 639 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 NLGN4XQ8N0W4 816 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 ZNF567Q8N184 647 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 C7orf31Q8N865 590 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 ZNF555Q8NEP9 628 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 HDAC2Q92769 488 aaKnown RBP7.44□□□□□ -1.22
CPSF6-202ENST00000435070 DUS3LQ96G46 650 aaKnown RBP7.44□□□□□ -1.22
CPSF6-202ENST00000435070 VMP1Q96GC9 406 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 CSPG4P5Q96PW8 444 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 YME1L1Q96TA2 773 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 NAT9Q9BTE0 207 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 ALG2Q9H553 416 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 PDZD7Q9H5P4 517 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 BTRCQ9Y297 605 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 PPP6CO00743 305 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 MTSS1O43312 755 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 GPD2P43304 727 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 LAPTM4AQ15012 233 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 SLFN12LQ6IEE8 588 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 GALNT5Q7Z7M9 940 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 FBXO30Q8TB52 745 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 HEXDCQ8WVB3 486 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 LGALS12Q96DT0 336 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 NRBP2Q9NSY0 501 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 ADAM28Q9UKQ2 775 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 LOC100506127A0A0U1RQW1 187 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 APOA4P06727 396 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 FCGR1AP12314 374 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 FAPQ12884 760 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 DGKZQ13574 1117 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 EMC2Q15006 297 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 NOL9Q5SY16 702 aaKnown RBP7.43□□□□□ -1.22
CPSF6-202ENST00000435070 CYS1Q717R9 158 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 TBC1D21Q8IYX1 336 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 CDC26Q8NHZ8 85 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 MUL1Q969V5 352 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 TUBGCP3Q96CW5 907 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.43□□□□□ -1.22
CPSF6-202ENST00000435070 PTPRFP10586 1907 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 ITGB4P16144 1822 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 ZCWPW2A0A1B0GU75 182 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 A8MX80 341 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 AHSGP02765 367 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 TAS2R39P59534 338 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 BNIP2Q12982 314 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 SIM2Q14190 667 aaPredicted RBP7.43□□□□□ -1.22
CPSF6-202ENST00000435070 GRB7Q14451 532 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 GLYATQ6IB77 296 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 FAM45BPQ6NSW5 357 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 ZDHHC13Q8IUH4 622 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 HID1Q8IV36 788 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 CCDC185Q8N715 623 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 OR10Q1Q8NGQ4 319 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 FAM45AQ8TCE6 357 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 CLEC4CQ8WTT0 213 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 LRRC58Q96CX6 371 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 MAU2Q9Y6X3 613 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 FXYD1O00168 92 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 JAK3P52333 1124 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 OSTM1Q86WC4 334 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 OR8H2Q8N162 312 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 FRS2Q8WU20 508 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 QKIQ96PU8 341 aaKnown RBP eCLIP7.43□□□□□ -1.222e-15■■■■■ 33.4
CPSF6-202ENST00000435070 AKTIPQ9H8T0 292 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 GMIPQ9P107 970 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 KIAA1257Q9ULG3 409 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 UBIAD1Q9Y5Z9 338 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 ZW10O43264 779 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 CDC40O60508 579 aaKnown RBP eCLIP7.43□□□□□ -1.223e-8■■□□□ 12.1
CPSF6-202ENST00000435070 MLNP12872 115 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 KCTD2Q14681 263 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 PLA2G4EQ3MJ16 856 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 SOWAHCQ53LP3 525 aaPredicted RBP7.43□□□□□ -1.22
CPSF6-202ENST00000435070 AGAP6Q5VW22 663 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 RAB44Q7Z6P3 723 aaPredicted RBP7.43□□□□□ -1.22
CPSF6-202ENST00000435070 CCDC120Q96HB5 630 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 AGAP4Q96P64 663 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 INTS10Q9NVR2 710 aaKnown RBP7.43□□□□□ -1.22
CPSF6-202ENST00000435070 TSPAN16Q9UKR8 245 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 SARDHQ9UL12 918 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 SYNPO2Q9UMS6 1093 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 CNTNAP4Q9C0A0 1308 aa7.43□□□□□ -1.22
CPSF6-202ENST00000435070 SPATA31C2B4DYI2 1134 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 SLC1A7O00341 560 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 GSTA4O15217 222 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 SLC22A1O15245 554 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 GPIP06744 558 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 ARL4AP40617 200 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 MTHFRP42898 656 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 TUBA1BP68363 451 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 POU6F1Q14863 301 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 TBRG1Q3YBR2 411 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 LCN8Q6JVE9 175 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 TUBA1AQ71U36 451 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 PIWIL4Q7Z3Z4 852 aaKnown RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 ZC3HC1Q86WB0 502 aaKnown RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 CCDC28AQ8IWP9 274 aa7.42□□□□□ -1.22
CPSF6-202ENST00000435070 UBE2J2Q8N2K1 259 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms