RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 SAE1Q9UBE0 346 aaPredicted RBP10.1□□□□□ -0.79
ATG4B-211ENST00000429899 PPARGC1AQ9UBK2 798 aaKnown RBP10.1□□□□□ -0.79
ATG4B-211ENST00000429899 AMACRQ9UHK6 382 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 DNPEPQ9ULA0 475 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 NEU2Q9Y3R4 380 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 RNF215Q9Y6U7 377 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 MDC1Q14676 2089 aaKnown RBP10.1□□□□□ -0.79
ATG4B-211ENST00000429899 DRGXA6NNA5 263 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 TCP11X1B4DZS4 312 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 ALOX15BO15296 676 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 TTI1O43156 1089 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 ATP9BO43861 1147 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 TACR2P21452 398 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 EPHB2P29323 1055 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 MRPS25P82663 173 aaKnown RBP10.09□□□□□ -0.79
ATG4B-211ENST00000429899 DR1Q01658 176 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 SLC10A2Q12908 348 aaPredicted RBP10.09□□□□□ -0.79
ATG4B-211ENST00000429899 DLG2Q15700 870 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 ZXDCQ2QGD7 858 aaPredicted RBP10.09□□□□□ -0.79
ATG4B-211ENST00000429899 GLE1Q53GS7 698 aaKnown RBP10.09□□□□□ -0.79
ATG4B-211ENST00000429899 AFMIDQ63HM1 303 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 FBXL22Q6P050 247 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 CHSY1Q86X52 802 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 CIR1Q86X95 450 aaPredicted RBP10.09□□□□□ -0.79
ATG4B-211ENST00000429899 CCNJLQ8IV13 435 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 SFTPA2Q8IWL1 248 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 ARHGAP12Q8IWW6 846 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 MCEMP1Q8IX19 187 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 CCDC13Q8IYE1 715 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 MMP21Q8N119 569 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 RTL3Q8N8U3 475 aaKnown RBP10.09□□□□□ -0.79
ATG4B-211ENST00000429899 BTN2A2Q8WVV5 523 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 NANOS1Q8WY41 292 aaKnown RBP10.09□□□□□ -0.79
ATG4B-211ENST00000429899 SEC14L1Q92503 715 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 UBXN4Q92575 508 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 SLC45A3Q96JT2 553 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 TRIM51Q9BSJ1 452 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 MAK16Q9BXY0 300 aaKnown RBP10.09□□□□□ -0.79
ATG4B-211ENST00000429899 B3GNT4Q9C0J1 378 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 SIK2Q9H0K1 926 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 CDH19Q9H159 772 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 DMGDHQ9UI17 866 aaKnown RBP10.09□□□□□ -0.79
ATG4B-211ENST00000429899 VANGL2Q9ULK5 521 aa10.09□□□□□ -0.79
ATG4B-211ENST00000429899 TYW5A2RUC4 315 aaKnown RBP10.08□□□□□ -0.8
ATG4B-211ENST00000429899 FAM187AA6NFU0 413 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 ZSCAN5CA6NGD5 496 aaPredicted RBP10.08□□□□□ -0.8
ATG4B-211ENST00000429899 MKRN2OSH3BPM6 223 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 HEXIM1O94992 359 aaKnown RBP10.08□□□□□ -0.8
ATG4B-211ENST00000429899 MAP3K6O95382 1288 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 ECEL1O95672 775 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 PDGFAP04085 211 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 RHOXF2BP0C7M4 288 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 FGF3P11487 239 aaPredicted RBP10.08□□□□□ -0.8
ATG4B-211ENST00000429899 RHOQP17081 205 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 KCNJ1P48048 391 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 NR2C2P49116 596 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 EIF3EP60228 445 aaKnown RBP10.08□□□□□ -0.8
ATG4B-211ENST00000429899 PFN3P60673 137 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 GALNT2Q10471 571 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 XRCC4Q13426 336 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 SNX1Q13596 522 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 PTK6Q13882 451 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 PRKD1Q15139 912 aaPredicted RBP10.08□□□□□ -0.8
ATG4B-211ENST00000429899 ALFQ53S48 1182 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 TCTN3Q6NUS6 607 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 C16orf46Q6P387 395 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 TMCO3Q6UWJ1 677 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 CCDC117Q8IWD4 279 aaPredicted RBP10.08□□□□□ -0.8
ATG4B-211ENST00000429899 TP53INP2Q8IXH6 220 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 LGI2Q8N0V4 545 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 OR52K2Q8NGK3 314 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 P3H4Q92791 437 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 RTP4Q96DX8 246 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 ALG14Q96F25 216 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 C5orf34Q96MH7 638 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 RHOXF2Q9BQY4 288 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 ZYG11BQ9C0D3 744 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 NOL6Q9H6R4 1146 aaKnown RBP10.08□□□□□ -0.8
ATG4B-211ENST00000429899 CATSPERBQ9H7T0 1116 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 GPN2Q9H9Y4 310 aaPredicted RBP10.08□□□□□ -0.8
ATG4B-211ENST00000429899 TMEM248Q9NWD8 314 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 SLC12A6Q9UHW9 1150 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 KCND3Q9UK17 655 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 MAP4K5Q9Y4K4 846 aa10.08□□□□□ -0.8
ATG4B-211ENST00000429899 F5H5T6 163 aa10.07□□□□□ -0.8
ATG4B-211ENST00000429899 FPGTO14772 594 aa10.07□□□□□ -0.8
ATG4B-211ENST00000429899 CAPN5O15484 640 aaPredicted RBP10.07□□□□□ -0.8
ATG4B-211ENST00000429899 DAPK3O43293 454 aa10.07□□□□□ -0.8
ATG4B-211ENST00000429899 RAD1O60671 282 aa10.07□□□□□ -0.8
ATG4B-211ENST00000429899 MT-CO1P00395 513 aa10.07□□□□□ -0.8
ATG4B-211ENST00000429899 RBP3P10745 1247 aa10.07□□□□□ -0.8
ATG4B-211ENST00000429899 SERPINB6P35237 376 aa10.07□□□□□ -0.8
ATG4B-211ENST00000429899 VASPP50552 380 aaPredicted RBP10.07□□□□□ -0.8
ATG4B-211ENST00000429899 PLK1P53350 603 aa10.07□□□□□ -0.8
ATG4B-211ENST00000429899 GDF10P55107 478 aa10.07□□□□□ -0.8
ATG4B-211ENST00000429899 RPS21P63220 83 aaKnown RBP10.07□□□□□ -0.8
ATG4B-211ENST00000429899 SLC7A5Q01650 507 aa10.07□□□□□ -0.8
ATG4B-211ENST00000429899 SULT2A1Q06520 285 aa10.07□□□□□ -0.8
ATG4B-211ENST00000429899 PTK2BQ14289 1009 aa10.07□□□□□ -0.8
ATG4B-211ENST00000429899 KCTD19Q17RG1 926 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms