RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 OLFM1Q99784 485 aa8.68□□□□□ -1.02
GABPB1-205ENST00000429662 RTP3Q9BQQ7 232 aa8.68□□□□□ -1.02
GABPB1-205ENST00000429662 GPATCH1Q9BRR8 931 aaKnown RBP8.68□□□□□ -1.02
GABPB1-205ENST00000429662 MTG1Q9BT17 334 aaPredicted RBP8.68□□□□□ -1.02
GABPB1-205ENST00000429662 C9orf16Q9BUW7 83 aa8.68□□□□□ -1.02
GABPB1-205ENST00000429662 NUSAP1Q9BXS6 441 aaKnown RBP8.68□□□□□ -1.02
GABPB1-205ENST00000429662 YTHDF1Q9BYJ9 559 aaKnown RBP8.68□□□□□ -1.02
GABPB1-205ENST00000429662 ANKRD60Q9BZ19 345 aa8.68□□□□□ -1.02
GABPB1-205ENST00000429662 ZYG11BQ9C0D3 744 aa8.68□□□□□ -1.02
GABPB1-205ENST00000429662 MTIF3Q9H2K0 278 aaKnown RBP8.68□□□□□ -1.02
GABPB1-205ENST00000429662 FBXO44Q9H4M3 255 aa8.68□□□□□ -1.02
GABPB1-205ENST00000429662 COQ10BQ9H8M1 238 aa8.68□□□□□ -1.02
GABPB1-205ENST00000429662 CLK4Q9HAZ1 481 aaKnown RBP8.68□□□□□ -1.02
GABPB1-205ENST00000429662 CCM2LQ9NUG4 571 aaPredicted RBP8.68□□□□□ -1.02
GABPB1-205ENST00000429662 TMEM30AQ9NV96 361 aa8.68□□□□□ -1.02
GABPB1-205ENST00000429662 LMCD1Q9NZU5 365 aa8.68□□□□□ -1.02
GABPB1-205ENST00000429662 CCDC167Q9P0B6 97 aa8.68□□□□□ -1.02
GABPB1-205ENST00000429662 ABCD2Q9UBJ2 740 aa8.68□□□□□ -1.02
GABPB1-205ENST00000429662 RSL24D1Q9UHA3 163 aaKnown RBP8.68□□□□□ -1.02
GABPB1-205ENST00000429662 PACSIN3Q9UKS6 424 aa8.68□□□□□ -1.02
GABPB1-205ENST00000429662 HS3ST4Q9Y661 456 aa8.68□□□□□ -1.02
GABPB1-205ENST00000429662 SPEGQ15772 3267 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 LOC285095A0A1B0GVY8 99 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 CCDC78A2IDD5 438 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 PRORSD1PA6NEY8 169 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 TMEM233B4DJY2 109 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 PROB1E7EW31 1015 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 B3GAT3O94766 335 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 SUPT7LO94864 414 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 GLP2RO95838 553 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 S1PR4O95977 384 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 NPPAP01160 153 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 FGF1P05230 155 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 GPIP06744 558 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 IDO1P14902 403 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 LBPP18428 481 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 GPX3P22352 226 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 FDXRP22570 491 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 PBX3P40426 434 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 ATRXP46100 2492 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 SLC5A3P53794 718 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 NME5P56597 212 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 NUP107P57740 925 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 YBEYP58557 167 aaPredicted RBP8.67□□□□□ -1.02
GABPB1-205ENST00000429662 PURAQ00577 322 aaKnown RBP8.67□□□□□ -1.02
GABPB1-205ENST00000429662 IL10RBQ08334 325 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 TUSC3Q13454 348 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 FSCN1Q16658 493 aaKnown RBP8.67□□□□□ -1.02
GABPB1-205ENST00000429662 MYLK3Q32MK0 819 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 PARP15Q460N3 678 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 AASDHQ4L235 1098 aaPredicted RBP8.67□□□□□ -1.02
GABPB1-205ENST00000429662 UNC50Q53HI1 259 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 RBM20Q5T481 1227 aaKnown RBP8.67□□□□□ -1.02
GABPB1-205ENST00000429662 LCN8Q6JVE9 175 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 IYDQ6PHW0 289 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 TXNDC11Q6PKC3 985 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 AGMOQ6ZNB7 445 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 ASCL5Q7RTU5 278 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 ISCA2Q86U28 154 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 CROCCP3Q8IVE0 287 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 BBS5Q8N3I7 341 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 CHCHD4Q8N4Q1 142 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 RNF148Q8N7C7 305 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 ZFP28Q8NHY6 868 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 FAM81AQ8TBF8 368 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 ADAMTS16Q8TE57 1224 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 RSPH1Q8WYR4 309 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 LRTOMTQ8WZ04 291 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 EZH1Q92800 747 aaPredicted RBP8.67□□□□□ -1.02
GABPB1-205ENST00000429662 RMND5BQ96G75 393 aaPredicted RBP8.67□□□□□ -1.02
GABPB1-205ENST00000429662 SLC39A13Q96H72 371 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 FUBP3Q96I24 572 aaKnown RBP eCLIP8.67□□□□□ -1.02
GABPB1-205ENST00000429662 MARK4Q96L34 752 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 C8orf48Q96LL4 319 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 ZNF599Q96NL3 588 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 GRIP2Q9C0E4 1043 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 SP110Q9HB58 689 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 OLA1Q9NTK5 396 aaKnown RBP8.67□□□□□ -1.02
GABPB1-205ENST00000429662 INTS10Q9NVR2 710 aaKnown RBP8.67□□□□□ -1.02
GABPB1-205ENST00000429662 COMMD8Q9NX08 183 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 MIOSQ9NXC5 875 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 ACTR3BQ9P1U1 418 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 APPL1Q9UKG1 709 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 SCML2Q9UQR0 700 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 TIMM13Q9Y5L4 95 aaPredicted RBP8.67□□□□□ -1.02
GABPB1-205ENST00000429662 SNX13Q9Y5W8 968 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 GMEB1Q9Y692 573 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 EP300Q09472 2414 aaPredicted RBP8.67□□□□□ -1.02
GABPB1-205ENST00000429662 ZZEF1O43149 2961 aa8.67□□□□□ -1.02
GABPB1-205ENST00000429662 IGLV3-10A0A075B6K4 115 aa8.66□□□□□ -1.02
GABPB1-205ENST00000429662 A0A0J9YYE9 177 aa8.66□□□□□ -1.02
GABPB1-205ENST00000429662 CASTOR2A6NHX0 329 aa8.66□□□□□ -1.02
GABPB1-205ENST00000429662 TRIM64CA6NLI5 447 aa8.66□□□□□ -1.02
GABPB1-205ENST00000429662 SYCE1LA8MT33 242 aa8.66□□□□□ -1.02
GABPB1-205ENST00000429662 TNFRSF10BO14763 440 aa8.66□□□□□ -1.02
GABPB1-205ENST00000429662 AZIN1O14977 448 aa8.66□□□□□ -1.02
GABPB1-205ENST00000429662 ANGPT2O15123 496 aa8.66□□□□□ -1.02
GABPB1-205ENST00000429662 PFDN6O15212 129 aa8.66□□□□□ -1.02
GABPB1-205ENST00000429662 INPPL1O15357 1258 aa8.66□□□□□ -1.02
GABPB1-205ENST00000429662 HTRA2O43464 458 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms