RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 C2orf81A6NN90 581 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 K7EPI3 171 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 KPNA6O60684 536 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 SEC22BO75396 215 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 APLP1P51693 650 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 CDKN2DP55273 166 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 P3H2Q8IVL5 708 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 NCSTNQ92542 709 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 NTAN1Q96AB6 310 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 CEP19Q96LK0 163 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 MUC3BQ9H195 1237 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 RASSF1Q9NS23 344 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 SCN3BQ9NY72 215 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 KIAA1217Q5T5P2 1943 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 CCDC162PA2VCL2 907 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 TRIM43BA6NCK2 446 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 ZNF487B1APH4 448 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 CDC7O00311 574 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 PIRO00625 290 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 KPNA4O00629 521 aaPredicted RBP13.68□□□□□ -0.22
SGMS1-203ENST00000429490 CDK14O94921 469 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 THRBP10828 461 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 SEPHS1P49903 392 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 AGTR2P50052 363 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 ARHGEF7Q14155 803 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 TIGD5Q53EQ6 642 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 C14orf80Q86SX3 495 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 CLEC14AQ86T13 490 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 RETREG3Q86VR2 466 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 OR10A6Q8NH74 314 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 HTRA1Q92743 480 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 CASP10Q92851 521 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 ZNF597Q96LX8 424 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 PPP1R2P1Q96PQ5 205 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 C16orf70Q9BSU1 422 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 ADGRE2Q9UHX3 823 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 CDH9Q9ULB4 789 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 USP22Q9UPT9 525 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 G3V2T6 193 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 PSEN2P49810 448 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 HERVK_113P63132 956 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 RFTN1Q14699 578 aaPredicted RBP13.68□□□□□ -0.22
SGMS1-203ENST00000429490 GPRIN3Q6ZVF9 776 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 CENPSQ8N2Z9 138 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 ROPN1LQ96C74 230 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 GLT1D1Q96MS3 346 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 ERVK-6Q9BXR3 956 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 NFKBIZQ9BYH8 718 aa13.68□□□□□ -0.22
SGMS1-203ENST00000429490 WDR6Q9NNW5 1121 aaKnown RBP13.68□□□□□ -0.22
SGMS1-203ENST00000429490 EXOSC4Q9NPD3 245 aaKnown RBP13.68□□□□□ -0.22
SGMS1-203ENST00000429490 INTS7Q9NVH2 962 aaKnown RBP13.68□□□□□ -0.22
SGMS1-203ENST00000429490 SCN1AP35498 2009 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 TAF1LQ8IZX4 1826 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 COL24A1Q17RW2 1714 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 FGF10O15520 208 aaPredicted RBP13.67□□□□□ -0.22
SGMS1-203ENST00000429490 ZNF37AP17032 561 aaPredicted RBP13.67□□□□□ -0.22
SGMS1-203ENST00000429490 LRP8Q14114 963 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 MAPKAPK3Q16644 382 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 CCNYL2Q5T2Q4 361 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 PPP4R4Q6NUP7 873 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 CCDC103Q8IW40 242 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 ARRDC4Q8NCT1 418 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 LINGO1Q96FE5 620 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 POLR1EQ9GZS1 481 aaKnown RBP13.67□□□□□ -0.22
SGMS1-203ENST00000429490 HMG20AQ9NP66 347 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 HPS4Q9NQG7 708 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 FAM105AQ9NUU6 356 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 SH3PXD2BA1X283 911 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 BBIP1A8MTZ0 92 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 LRATO95237 230 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 DMC1Q14565 340 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 ZNF678Q5SXM1 525 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 TTC23Q5W5X9 447 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 CXCL17Q6UXB2 119 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 ANKRD46Q86W74 232 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 HORMAD1Q86X24 394 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 SNX29P2Q8IUI4 249 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 EID3Q8N140 333 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 C2CD4AQ8NCU7 369 aaPredicted RBP13.67□□□□□ -0.22
SGMS1-203ENST00000429490 OR2T12Q8NG77 320 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 FEM1AQ9BSK4 669 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 EPB41L1Q9H4G0 881 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 POLG2Q9UHN1 485 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 SLC27A5Q9Y2P5 690 aa13.67□□□□□ -0.22
SGMS1-203ENST00000429490 LOC100506127A0A0U1RQW1 187 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 AQP12BA6NM10 295 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 SCNN1AP37088 669 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 KPNA1P52294 538 aaPredicted RBP13.66□□□□□ -0.22
SGMS1-203ENST00000429490 IL2P60568 153 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 LCP2Q13094 533 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 MEP1AQ16819 746 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 KIAA0408Q6ZU52 694 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 THAP5Q7Z6K1 395 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 AQP12AQ8IXF9 295 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 ATP6V0D2Q8N8Y2 350 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 ASPSCR1Q9BZE9 553 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 SLC25A51Q9H1U9 297 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 CCM2LQ9NUG4 571 aaPredicted RBP13.66□□□□□ -0.22
SGMS1-203ENST00000429490 ATAD3AQ9NVI7 634 aa13.66□□□□□ -0.22
SGMS1-203ENST00000429490 EIF3LQ9Y262 564 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms