RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 TFB1MQ8WVM0 346 aaKnown RBP18.26■□□□□ 0.51
PSPC1-202ENST00000427943 TADA1Q96BN2 335 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 EID2BQ96D98 161 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 RBSNQ9H1K0 784 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 SEMA6CQ9H3T2 930 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 ZFYVE1Q9HBF4 777 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 CPNE5Q9HCH3 593 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 ARFGAP3Q9NP61 516 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 PISDQ9UG56 409 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 ZNHIT2Q9UHR6 403 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 ZNF711Q9Y462 761 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 LOXL2Q9Y4K0 774 aa18.26■□□□□ 0.51
PSPC1-202ENST00000427943 MGAQ8IWI9 3026 aa18.25■□□□□ 0.51
PSPC1-202ENST00000427943 hCG_1818297A0A087WSY0 165 aa18.25■□□□□ 0.51
PSPC1-202ENST00000427943 SOWAHDA6NJG2 315 aa18.25■□□□□ 0.51
PSPC1-202ENST00000427943 DNAJC6O75061 913 aa18.25■□□□□ 0.51
PSPC1-202ENST00000427943 PMPCBO75439 489 aa18.25■□□□□ 0.51
PSPC1-202ENST00000427943 JMJD7P0C870 316 aa18.25■□□□□ 0.51
PSPC1-202ENST00000427943 ITIH1P19827 911 aa18.25■□□□□ 0.51
PSPC1-202ENST00000427943 MLLT3P42568 568 aaPredicted RBP18.25■□□□□ 0.51
PSPC1-202ENST00000427943 NR2C2P49116 596 aa18.25■□□□□ 0.51
PSPC1-202ENST00000427943 CDK18Q07002 472 aa18.25■□□□□ 0.51
PSPC1-202ENST00000427943 ZFP36L1Q07352 338 aaKnown RBP18.25■□□□□ 0.51
PSPC1-202ENST00000427943 EIF3IQ13347 325 aaKnown RBP18.25■□□□□ 0.51
PSPC1-202ENST00000427943 SPA17Q15506 151 aa18.25■□□□□ 0.51
PSPC1-202ENST00000427943 C11orf63Q6NUN7 778 aa18.25■□□□□ 0.51
PSPC1-202ENST00000427943 CHST15Q7LFX5 561 aaPredicted RBP18.25■□□□□ 0.51
PSPC1-202ENST00000427943 GPR155Q7Z3F1 870 aa18.25■□□□□ 0.51
PSPC1-202ENST00000427943 ZC3H18Q86VM9 953 aaKnown RBP18.25■□□□□ 0.51
PSPC1-202ENST00000427943 SLITRK4Q8IW52 837 aa18.25■□□□□ 0.51
PSPC1-202ENST00000427943 CCDC170Q8IYT3 715 aa18.25■□□□□ 0.51
PSPC1-202ENST00000427943 KATNAL2Q8IYT4 538 aa18.25■□□□□ 0.51
PSPC1-202ENST00000427943 GPR26Q8NDV2 337 aa18.25■□□□□ 0.51
PSPC1-202ENST00000427943 KRT35Q92764 455 aa18.25■□□□□ 0.51
PSPC1-202ENST00000427943 UBL7Q96S82 380 aaPredicted RBP18.25■□□□□ 0.51
PSPC1-202ENST00000427943 NUDT22Q9BRQ3 303 aa18.25■□□□□ 0.51
PSPC1-202ENST00000427943 SPATA16Q9BXB7 569 aa18.25■□□□□ 0.51
PSPC1-202ENST00000427943 VPS18Q9P253 973 aa18.25■□□□□ 0.51
PSPC1-202ENST00000427943 KCNK6Q9Y257 313 aa18.25■□□□□ 0.51
PSPC1-202ENST00000427943 ZNF106Q9H2Y7 1883 aaKnown RBP18.24■□□□□ 0.51
PSPC1-202ENST00000427943 TRBV23OR9-2A0A075B6M9 112 aa18.24■□□□□ 0.51
PSPC1-202ENST00000427943 PPM1DO15297 605 aa18.24■□□□□ 0.51
PSPC1-202ENST00000427943 EML2O95834 649 aa18.24■□□□□ 0.51
PSPC1-202ENST00000427943 NFKB1P19838 968 aa18.24■□□□□ 0.51
PSPC1-202ENST00000427943 TMPRSS3P57727 454 aa18.24■□□□□ 0.51
PSPC1-202ENST00000427943 WASHC5Q12768 1159 aa18.24■□□□□ 0.51
PSPC1-202ENST00000427943 PEX6Q13608 980 aa18.24■□□□□ 0.51
PSPC1-202ENST00000427943 COL9A2Q14055 689 aaPredicted RBP18.24■□□□□ 0.51
PSPC1-202ENST00000427943 NR1D2Q14995 579 aa18.24■□□□□ 0.51
PSPC1-202ENST00000427943 SLC14A2Q15849 920 aa18.24■□□□□ 0.51
PSPC1-202ENST00000427943 ZNF569Q5MCW4 686 aa18.24■□□□□ 0.51
PSPC1-202ENST00000427943 ZNF648Q5T619 568 aaPredicted RBP18.24■□□□□ 0.51
PSPC1-202ENST00000427943 USP53Q70EK8 1073 aa18.24■□□□□ 0.51
PSPC1-202ENST00000427943 BZW1Q7L1Q6 419 aaKnown RBP18.24■□□□□ 0.51
PSPC1-202ENST00000427943 DAAM2Q86T65 1068 aa18.24■□□□□ 0.51
PSPC1-202ENST00000427943 PIM3Q86V86 326 aa18.24■□□□□ 0.51
PSPC1-202ENST00000427943 SLC37A2Q8TED4 501 aa18.24■□□□□ 0.51
PSPC1-202ENST00000427943 P3H4Q92791 437 aa18.24■□□□□ 0.51
PSPC1-202ENST00000427943 TEKT5Q96M29 485 aa18.24■□□□□ 0.51
PSPC1-202ENST00000427943 DPH1Q9BZG8 443 aa18.24■□□□□ 0.51
PSPC1-202ENST00000427943 GPR63Q9BZJ6 419 aa18.24■□□□□ 0.51
PSPC1-202ENST00000427943 WDR70Q9NW82 654 aa18.24■□□□□ 0.51
PSPC1-202ENST00000427943 SPO11Q9Y5K1 396 aa18.24■□□□□ 0.51
PSPC1-202ENST00000427943 RGSL1A5PLK6 1076 aa18.23■□□□□ 0.51
PSPC1-202ENST00000427943 RCCD1A6NED2 376 aa18.23■□□□□ 0.51
PSPC1-202ENST00000427943 ZRANB2O95218 330 aaKnown RBP eCLIP18.23■□□□□ 0.51
PSPC1-202ENST00000427943 CPNE6O95741 557 aa18.23■□□□□ 0.51
PSPC1-202ENST00000427943 NDST3O95803 873 aa18.23■□□□□ 0.51
PSPC1-202ENST00000427943 ACP5P13686 325 aa18.23■□□□□ 0.51
PSPC1-202ENST00000427943 SLC5A2P31639 672 aa18.23■□□□□ 0.51
PSPC1-202ENST00000427943 CD68P34810 354 aaPredicted RBP18.23■□□□□ 0.51
PSPC1-202ENST00000427943 ETV5P41161 510 aa18.23■□□□□ 0.51
PSPC1-202ENST00000427943 LRP8Q14114 963 aa18.23■□□□□ 0.51
PSPC1-202ENST00000427943 C16orf72Q14CZ0 275 aa18.23■□□□□ 0.51
PSPC1-202ENST00000427943 NOMO1Q15155 1222 aa18.23■□□□□ 0.51
PSPC1-202ENST00000427943 ARHGAP40Q5TG30 622 aa18.23■□□□□ 0.51
PSPC1-202ENST00000427943 NKAIN2Q5VXU1 208 aa18.23■□□□□ 0.51
PSPC1-202ENST00000427943 TMC3Q7Z5M5 1100 aa18.23■□□□□ 0.51
PSPC1-202ENST00000427943 ZNF761Q86XN6 746 aaPredicted RBP18.23■□□□□ 0.51
PSPC1-202ENST00000427943 MRFAP1L1Q96HT8 127 aa18.23■□□□□ 0.51
PSPC1-202ENST00000427943 RBM41Q96IZ5 413 aaKnown RBP18.23■□□□□ 0.51
PSPC1-202ENST00000427943 PANX2Q96RD6 677 aa18.23■□□□□ 0.51
PSPC1-202ENST00000427943 MAGEE1Q9HCI5 957 aa18.23■□□□□ 0.51
PSPC1-202ENST00000427943 LUC7LQ9NQ29 371 aaKnown RBP18.23■□□□□ 0.51
PSPC1-202ENST00000427943 KLHL8Q9P2G9 620 aaPredicted RBP18.23■□□□□ 0.51
PSPC1-202ENST00000427943 ATRXP46100 2492 aa18.23■□□□□ 0.51
PSPC1-202ENST00000427943 AURKAO14965 403 aa18.22■□□□□ 0.51
PSPC1-202ENST00000427943 NDUFA10O95299 355 aa18.22■□□□□ 0.51
PSPC1-202ENST00000427943 CD1CP29017 333 aa18.22■□□□□ 0.51
PSPC1-202ENST00000427943 UCNP55089 124 aa18.22■□□□□ 0.51
PSPC1-202ENST00000427943 DCDC1P59894 354 aa18.22■□□□□ 0.51
PSPC1-202ENST00000427943 CLN3Q13286 438 aa18.22■□□□□ 0.51
PSPC1-202ENST00000427943 RCOR2Q8IZ40 523 aa18.22■□□□□ 0.51
PSPC1-202ENST00000427943 ZNF567Q8N184 647 aa18.22■□□□□ 0.51
PSPC1-202ENST00000427943 RCBTB1Q8NDN9 531 aa18.22■□□□□ 0.51
PSPC1-202ENST00000427943 CCDC97Q96F63 343 aaPredicted RBP18.22■□□□□ 0.51
PSPC1-202ENST00000427943 QKIQ96PU8 341 aaKnown RBP eCLIP18.22■□□□□ 0.51
PSPC1-202ENST00000427943 HEMGNQ9BXL5 484 aa18.22■□□□□ 0.51
PSPC1-202ENST00000427943 ZMYND15Q9H091 742 aa18.22■□□□□ 0.51
PSPC1-202ENST00000427943 KCNK4Q9NYG8 393 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms