RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 STEAP4Q687X5 459 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 REP15Q6BDI9 236 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 SDE2Q6IQ49 451 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 MFSD7Q6UXD7 560 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 ISLR2Q6UXK2 745 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 SLC16A12Q6ZSM3 486 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZCCHC23Q6ZST2 131 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 CDHR3Q6ZTQ4 885 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 EFL1Q7Z2Z2 1120 aaKnown RBP5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 PRSS42Q7Z5A4 293 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 R3HCC1LQ7Z5L2 792 aaKnown RBP5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 RAB44Q7Z6P3 723 aaPredicted RBP5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 MRPL10Q7Z7H8 261 aaKnown RBP5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 GLRX5Q86SX6 157 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 AMIGO1Q86WK6 493 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 ADGRG3Q86Y34 549 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 DNAAF5Q86Y56 855 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 GATAD2AQ86YP4 633 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 RASAL3Q86YV0 1011 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 RFX6Q8HWS3 928 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 RASGRP3Q8IV61 690 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 CDH26Q8IXH8 852 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 VWA5B2Q8N398 1253 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 METTL4Q8N3J2 472 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 TTLL6Q8N841 843 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 GDPD1Q8N9F7 314 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZSCAN18Q8TBC5 510 aaPredicted RBP5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 TEX47Q8TBZ9 253 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 ACTL9Q8TC94 416 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 SLC22A8Q8TCC7 542 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 MAGEE2Q8TD90 523 aaPredicted RBP5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 SLC7A6Q92536 515 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 HAS1Q92839 578 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 HDAC10Q969S8 669 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 KIAA1143Q96AT1 154 aaPredicted RBP5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 TESCQ96BS2 214 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 AHCYL2Q96HN2 611 aaKnown RBP5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 PPP3R2Q96LZ3 170 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 FRMD6Q96NE9 622 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 KCTD15Q96SI1 283 aaPredicted RBP5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 DPYSL5Q9BPU6 564 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 APOL2Q9BQE5 337 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 TMEM47Q9BQJ4 181 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 TCEAL7Q9BRU2 100 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 MCMBPQ9BTE3 642 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 RUSC1Q9BVN2 902 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 SPATA9Q9BWV2 254 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 APOL5Q9BWW9 433 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 DGCR6LQ9BY27 220 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 ITPAQ9BY32 194 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 CCDC90BQ9GZT6 254 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 NXF2Q9GZY0 626 aaKnown RBP5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 NAA50Q9GZZ1 169 aaKnown RBP5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 FAM83DQ9H4H8 585 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 RANBP3Q9H6Z4 567 aaPredicted RBP5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 GREM2Q9H772 168 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 NMRAL1Q9HBL8 299 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 NGRNQ9NPE2 291 aaKnown RBP5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 FANCFQ9NPI8 374 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 XPNPEP1Q9NQW7 623 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 TBC1D22BQ9NU19 505 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 TMEM39AQ9NV64 488 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 PNPOQ9NVS9 261 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 POLR3BQ9NW08 1133 aaPredicted RBP5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 BFARQ9NZS9 450 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 DNMT3BQ9UBC3 853 aaKnown RBP5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 ABCD2Q9UBJ2 740 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 FAM8A1Q9UBU6 413 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 KLQ9UEF7 1012 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 GPN3Q9UHW5 284 aaPredicted RBP5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 VWA7Q9Y334 891 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 GPSM3Q9Y4H4 160 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 FKBP7Q9Y680 259 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 DGKBQ9Y6T7 804 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 FER1L6Q2WGJ9 1857 aa5.59□□□□□ -1.51
VTI1BP4-201ENST00000427516 A0A075B6Q4 140 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 ATP6AP2A0A1C7CYW4 349 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 CCDC78A2IDD5 438 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 TMEM191CA6NGB0 347 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 LEUTXA8MZ59 168 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 ERVH48-1M5A8F1 160 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 WRBO00258 174 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 IFRD1O00458 451 aaPredicted RBP5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 CTDSP2O14595 271 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 TPP1O14773 563 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 SLC30A4O14863 429 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 CD3EAPO15446 510 aaKnown RBP5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 RGS5O15539 181 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 MED7O43513 233 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 RGS10O43665 173 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 USP12O75317 370 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 LYPLA1O75608 230 aaPredicted RBP5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 TMEM63AO94886 807 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 SOX30O94993 753 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 SEMA3DO95025 777 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 KCNK2O95069 426 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 STAU1O95793 577 aaKnown RBP5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 OLFM2O95897 454 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 ALPPP05187 535 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 RPLP0P05388 317 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms