RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 TTPAP49638 278 aa17.86■□□□□ 0.45
AC055811.2-201ENST00000427497 CDKN2DP55273 166 aa17.86■□□□□ 0.45
AC055811.2-201ENST00000427497 IRX4P78413 519 aa17.86■□□□□ 0.45
AC055811.2-201ENST00000427497 TIAL1Q01085 375 aaKnown RBP eCLIP17.86■□□□□ 0.45
AC055811.2-201ENST00000427497 PCLAFQ15004 111 aa17.86■□□□□ 0.45
AC055811.2-201ENST00000427497 ARSIQ5FYB1 569 aa17.86■□□□□ 0.45
AC055811.2-201ENST00000427497 AARS2Q5JTZ9 985 aaKnown RBP17.86■□□□□ 0.45
AC055811.2-201ENST00000427497 RNF187Q5TA31 235 aaPredicted RBP17.86■□□□□ 0.45
AC055811.2-201ENST00000427497 NUDCD3Q8IVD9 361 aa17.86■□□□□ 0.45
AC055811.2-201ENST00000427497 SFTPA1Q8IWL2 248 aa17.86■□□□□ 0.45
AC055811.2-201ENST00000427497 FANCMQ8IYD8 2048 aa17.86■□□□□ 0.45
AC055811.2-201ENST00000427497 KCTD4Q8WVF5 259 aa17.86■□□□□ 0.45
AC055811.2-201ENST00000427497 GPR78Q96P69 363 aa17.86■□□□□ 0.45
AC055811.2-201ENST00000427497 NELL2Q99435 816 aa17.86■□□□□ 0.45
AC055811.2-201ENST00000427497 ELAC2Q9BQ52 826 aaKnown RBP17.86■□□□□ 0.45
AC055811.2-201ENST00000427497 AARSD1Q9BTE6 412 aaKnown RBP17.86■□□□□ 0.45
AC055811.2-201ENST00000427497 NMRAL1Q9HBL8 299 aa17.86■□□□□ 0.45
AC055811.2-201ENST00000427497 COPG2Q9UBF2 871 aa17.86■□□□□ 0.45
AC055811.2-201ENST00000427497 DKK3Q9UBP4 350 aa17.86■□□□□ 0.45
AC055811.2-201ENST00000427497 STARD13Q9Y3M8 1113 aa17.86■□□□□ 0.45
AC055811.2-201ENST00000427497 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 NDUFS3O75489 264 aa17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 KLHL2O95198 593 aa17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 APOA4P06727 396 aa17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 BPIP17213 487 aa17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 LHCGRP22888 699 aa17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 TARSP26639 723 aaKnown RBP17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 ALDH3A1P30838 453 aa17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 SUOXP51687 545 aa17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 DLG1Q12959 904 aa17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 HNRNPA1L2Q32P51 320 aaKnown RBP17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 ITPRIPL2Q3MIP1 535 aa17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 ZRANB3Q5FWF4 1079 aa17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 LRRC66Q68CR7 880 aa17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 TMEM151AQ8N4L1 468 aa17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 ZNF366Q8N895 744 aa17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 CCDC63Q8NA47 563 aa17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 TTC8Q8TAM2 541 aa17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 UBXN10Q96LJ8 280 aa17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 TMEM245Q9H330 911 aa17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 IL26Q9NPH9 171 aa17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 APPL1Q9UKG1 709 aa17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 MRPS17Q9Y2R5 130 aaKnown RBP17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 SLC30A1Q9Y6M5 507 aa17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 FAM186AA6NE01 2351 aa17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 PTPRZ1P23471 2315 aaPredicted RBP17.85■□□□□ 0.45
AC055811.2-201ENST00000427497 EDDM13A0A1B0GTR0 161 aa17.84■□□□□ 0.45
AC055811.2-201ENST00000427497 PFDN6O15212 129 aa17.84■□□□□ 0.45
AC055811.2-201ENST00000427497 SRP72O76094 671 aaKnown RBP17.84■□□□□ 0.45
AC055811.2-201ENST00000427497 SLC26A3P40879 764 aa17.84■□□□□ 0.45
AC055811.2-201ENST00000427497 MAGEA9P43362 315 aa17.84■□□□□ 0.45
AC055811.2-201ENST00000427497 ADARP55265 1226 aaKnown RBP17.84■□□□□ 0.45
AC055811.2-201ENST00000427497 PTSQ03393 145 aa17.84■□□□□ 0.45
AC055811.2-201ENST00000427497 ZNF234Q14588 700 aa17.84■□□□□ 0.45
AC055811.2-201ENST00000427497 TSNAXIP1Q2TAA8 658 aa17.84■□□□□ 0.45
AC055811.2-201ENST00000427497 FNDC3BQ53EP0 1204 aaKnown RBP17.84■□□□□ 0.45
AC055811.2-201ENST00000427497 ZNF805Q5CZA5 627 aa17.84■□□□□ 0.45
AC055811.2-201ENST00000427497 CES4AQ5XG92 561 aa17.84■□□□□ 0.45
AC055811.2-201ENST00000427497 OTOAQ7RTW8 1153 aa17.84■□□□□ 0.45
AC055811.2-201ENST00000427497 CACNA2D3Q8IZS8 1091 aa17.84■□□□□ 0.45
AC055811.2-201ENST00000427497 CLDN23Q96B33 292 aa17.84■□□□□ 0.45
AC055811.2-201ENST00000427497 TSNARE1Q96NA8 513 aa17.84■□□□□ 0.45
AC055811.2-201ENST00000427497 FAM96AQ9H5X1 160 aa17.84■□□□□ 0.45
AC055811.2-201ENST00000427497 POPDC3Q9HBV1 291 aa17.84■□□□□ 0.45
AC055811.2-201ENST00000427497 B4GALT6Q9UBX8 382 aa17.84■□□□□ 0.45
AC055811.2-201ENST00000427497 RUVBL2Q9Y230 463 aaKnown RBP17.84■□□□□ 0.45
AC055811.2-201ENST00000427497 WDR87Q6ZQQ6 2873 aa17.84■□□□□ 0.45
AC055811.2-201ENST00000427497 TRBV5-4A0A0C4DH59 114 aa17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 TBC1D3BA6NDS4 549 aa17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 A8MX80 341 aa17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 TARM1B6A8C7 271 aa17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 G3V2L1 256 aa17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 MAN2B1O00754 1011 aa17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 KAT7O95251 611 aa17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 SBK3P0C264 359 aa17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 SP9P0CG40 484 aa17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 NEFHP12036 1026 aa17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 CPA3P15088 417 aa17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 TIMP2P16035 220 aa17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 CHI3L2Q15782 390 aa17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 C9orf64Q5T6V5 341 aa17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 CERS6Q6ZMG9 384 aa17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 TBC1D1Q86TI0 1168 aaPredicted RBP17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 MAML2Q8IZL2 1156 aaPredicted RBP17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 RDH11Q8TC12 318 aa17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 UCMAQ8WVF2 138 aa17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 NXNL1Q96CM4 212 aa17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 BIRC8Q96P09 236 aa17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 IGSF5Q9NSI5 407 aa17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 SPATA6Q9NWH7 488 aaPredicted RBP17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 HCN2Q9UL51 889 aa17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 FNDC3AQ9Y2H6 1198 aaKnown RBP17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 MED16Q9Y2X0 877 aa17.83■□□□□ 0.45
AC055811.2-201ENST00000427497 UBA6A0AVT1 1052 aaPredicted RBP17.83■□□□□ 0.44
AC055811.2-201ENST00000427497 UPK3BL1B0FP48 263 aa17.83■□□□□ 0.44
AC055811.2-201ENST00000427497 UPK3BL2E5RIL1 263 aa17.83■□□□□ 0.44
AC055811.2-201ENST00000427497 EBAG9O00559 213 aa17.83■□□□□ 0.44
AC055811.2-201ENST00000427497 DNAJC6O75061 913 aa17.83■□□□□ 0.44
AC055811.2-201ENST00000427497 PRAMEF1O95521 474 aa17.83■□□□□ 0.44
AC055811.2-201ENST00000427497 CHRM1P11229 460 aaPredicted RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms