RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 PLEKHA7Q6IQ23 1121 aa2.44□□□□□ -2.02
PTPRC-208ENST00000427110 RGMBQ6NW40 437 aa2.44□□□□□ -2.02
PTPRC-208ENST00000427110 KRBA2Q6ZNG9 492 aa2.44□□□□□ -2.02
PTPRC-208ENST00000427110 CREB3L2Q70SY1 520 aa2.44□□□□□ -2.02
PTPRC-208ENST00000427110 ENOSF1Q7L5Y1 443 aa2.44□□□□□ -2.02
PTPRC-208ENST00000427110 CCDC190Q86UF4 302 aa2.44□□□□□ -2.02
PTPRC-208ENST00000427110 GPR180Q86V85 440 aa2.44□□□□□ -2.02
PTPRC-208ENST00000427110 ADHFE1Q8IWW8 467 aa2.44□□□□□ -2.02
PTPRC-208ENST00000427110 HACE1Q8IYU2 909 aa2.44□□□□□ -2.02
PTPRC-208ENST00000427110 DCP1BQ8IZD4 617 aaKnown RBP2.44□□□□□ -2.02
PTPRC-208ENST00000427110 POC5Q8NA72 575 aa2.44□□□□□ -2.02
PTPRC-208ENST00000427110 HJURPQ8NCD3 748 aaPredicted RBP2.44□□□□□ -2.02
PTPRC-208ENST00000427110 OR1J2Q8NGS2 313 aa2.44□□□□□ -2.02
PTPRC-208ENST00000427110 CCDC34Q96HJ3 373 aa2.44□□□□□ -2.02
PTPRC-208ENST00000427110 RSRC1Q96IZ7 334 aaKnown RBP2.44□□□□□ -2.02
PTPRC-208ENST00000427110 FEM1CQ96JP0 617 aa2.44□□□□□ -2.02
PTPRC-208ENST00000427110 C3orf30Q96M34 536 aa2.44□□□□□ -2.02
PTPRC-208ENST00000427110 NEUROD6Q96NK8 337 aa2.44□□□□□ -2.02
PTPRC-208ENST00000427110 SMC6Q96SB8 1091 aa2.44□□□□□ -2.02
PTPRC-208ENST00000427110 CMKLR1Q99788 373 aa2.44□□□□□ -2.02
PTPRC-208ENST00000427110 C1QTNF1Q9BXJ1 281 aa2.44□□□□□ -2.02
PTPRC-208ENST00000427110 HRH4Q9H3N8 390 aa2.44□□□□□ -2.02
PTPRC-208ENST00000427110 SEBOXQ9HB31 216 aaPredicted RBP2.44□□□□□ -2.02
PTPRC-208ENST00000427110 TINAGQ9UJW2 476 aa2.44□□□□□ -2.02
PTPRC-208ENST00000427110 FBXW11Q9UKB1 542 aa2.44□□□□□ -2.02
PTPRC-208ENST00000427110 SLC45A1Q9Y2W3 748 aa2.44□□□□□ -2.02
PTPRC-208ENST00000427110 LOXL2Q9Y4K0 774 aa2.44□□□□□ -2.02
PTPRC-208ENST00000427110 SNX8Q9Y5X2 465 aa2.44□□□□□ -2.02
PTPRC-208ENST00000427110 A0A0U1RQJ8 604 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 LRRC72A6NJI9 287 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 A8MV72 311 aaPredicted RBP2.43□□□□□ -2.02
PTPRC-208ENST00000427110 PRSS44E7EML9 344 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 M0QZ24 198 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 OGG1O15527 345 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 SPINT2O43291 252 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 DAB1O75553 588 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 BEST1O76090 585 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 KCNK5O95279 499 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 ICAM1P05362 532 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 ACSL1P33121 698 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 MATR3P43243 847 aaKnown RBP eCLIP2.43□□□□□ -2.02
PTPRC-208ENST00000427110 MSH2P43246 934 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 LMAN1P49257 510 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 CLCNKAP51800 687 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 GPR143P51810 404 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 DSCR9P59020 149 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 SEC61BP60468 96 aaKnown RBP2.43□□□□□ -2.02
PTPRC-208ENST00000427110 CALD1Q05682 793 aaKnown RBP2.43□□□□□ -2.02
PTPRC-208ENST00000427110 GRIK2Q13002 908 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 STK4Q13043 487 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 MYBPHQ13203 477 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 MAD2L1Q13257 205 aaPredicted RBP2.43□□□□□ -2.02
PTPRC-208ENST00000427110 KRT33BQ14525 404 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 FRG2Q64ET8 278 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 TMEM198Q66K66 360 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 CAPRIN2Q6IMN6 1127 aaKnown RBP2.43□□□□□ -2.02
PTPRC-208ENST00000427110 PDXDC1Q6P996 788 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 RHBDF2Q6PJF5 856 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 TMCO3Q6UWJ1 677 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 CCNI2Q6ZMN8 369 aaPredicted RBP2.43□□□□□ -2.02
PTPRC-208ENST00000427110 CLEC17AQ6ZS10 378 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 NR2C2APQ86WQ0 139 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 EPHX4Q8IUS5 362 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 ARID3BQ8IVW6 561 aaPredicted RBP2.43□□□□□ -2.02
PTPRC-208ENST00000427110 SCYL3Q8IZE3 742 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 PGBD5Q8N414 524 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 PCDH20Q8N6Y1 951 aaKnown RBP2.43□□□□□ -2.02
PTPRC-208ENST00000427110 NEXN-AS1Q8NBZ9 246 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 APPL2Q8NEU8 664 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 OR2AK2Q8NG84 335 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 LMO3Q8TAP4 145 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 GSDMBQ8TAX9 411 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 HMGCLL1Q8TB92 370 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 HM13Q8TCT9 377 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 ELP5Q8TE02 316 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 FAM216AQ8WUB2 273 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 DNAAF4Q8WXU2 420 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 APBB2Q92870 758 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 GRAMD2BQ96HH9 432 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 PPP1R13BQ96KQ4 1090 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 OR2A14Q96R47 310 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 FIZ1Q96SL8 496 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 PAFAH2Q99487 392 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 MTERF1Q99551 399 aaKnown RBP2.43□□□□□ -2.02
PTPRC-208ENST00000427110 CENPOQ9BU64 300 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 SIL1Q9H173 461 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 KCNN2Q9H2S1 579 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 DNAJC18Q9H819 358 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 EPB41L5Q9HCM4 733 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 MMP25Q9NPA2 562 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 MRPL15Q9P015 296 aaKnown RBP2.43□□□□□ -2.02
PTPRC-208ENST00000427110 SUCLA2Q9P2R7 463 aaPredicted RBP2.43□□□□□ -2.02
PTPRC-208ENST00000427110 WNT16Q9UBV4 365 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 MALT1Q9UDY8 824 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 FBXL2Q9UKC9 423 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 KLHL20Q9Y2M5 609 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 PTRH2Q9Y3E5 179 aaKnown RBP2.43□□□□□ -2.02
PTPRC-208ENST00000427110 CMAHPQ9Y471 501 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 NFS1Q9Y697 457 aa2.43□□□□□ -2.02
PTPRC-208ENST00000427110 IGLV5-52A0A0A0MRZ9 124 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms