RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 ERAL1O75616 437 aaKnown RBP13.81□□□□□ -0.2
RPL28-202ENST00000426763 ANXA6P08133 673 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 SSR2P43308 183 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 BLKP51451 505 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 COPZ1P61923 177 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 FASTKD3Q14CZ7 662 aaKnown RBP13.81□□□□□ -0.2
RPL28-202ENST00000426763 DSELQ8IZU8 1212 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 SLC35B2Q8TB61 432 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 CLIP3Q96DZ5 547 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 THAP11Q96EK4 314 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 SPATA5L1Q9BVQ7 753 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 XYLT2Q9H1B5 865 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 SLC17A7Q9P2U7 560 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 GPN3Q9UHW5 284 aaPredicted RBP13.81□□□□□ -0.2
RPL28-202ENST00000426763 OR10H1Q9Y4A9 318 aa13.81□□□□□ -0.2
RPL28-202ENST00000426763 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.8□□□□□ -0.2
RPL28-202ENST00000426763 LEFTY2O00292 366 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 UBTFL6P0CB48 400 aaPredicted RBP13.8□□□□□ -0.2
RPL28-202ENST00000426763 CLK3P49761 638 aaKnown RBP13.8□□□□□ -0.2
RPL28-202ENST00000426763 ACAP2Q15057 778 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 MFSD5Q6N075 450 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 OR2AP1Q8NGE2 309 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 IRF7Q92985 503 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 MECRQ9BV79 373 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 YIPF3Q9GZM5 350 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 WNT9AO14904 365 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 ENO2P09104 434 aaPredicted RBP13.8□□□□□ -0.2
RPL28-202ENST00000426763 HNRNPA1P09651 372 aaKnown RBP eCLIP13.8□□□□□ -0.2
RPL28-202ENST00000426763 TMED1Q13445 227 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 RNF43Q68DV7 783 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 BRAT1Q6PJG6 821 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 CYP2R1Q6VVX0 501 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 LPCAT2Q7L5N7 544 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 AADATQ8N5Z0 425 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 TMCO5AQ8N6Q1 288 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 NUS1Q96E22 293 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 ZNF514Q96K75 400 aaPredicted RBP13.8□□□□□ -0.2
RPL28-202ENST00000426763 C1orf50Q9BV19 199 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 GPR62Q9BZJ7 368 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 TELO2Q9Y4R8 837 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 NHSQ6T4R5 1651 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 TRBV23OR9-2A0A075B6M9 112 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 M0R3G1 203 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 SERPINI2O75830 405 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 COX4I1P13073 169 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 PIK3R1P27986 724 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 CMPK1P30085 196 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 CDH5P33151 784 aaPredicted RBP13.8□□□□□ -0.2
RPL28-202ENST00000426763 S100A5P33763 92 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 SOX4Q06945 474 aaPredicted RBP13.8□□□□□ -0.2
RPL28-202ENST00000426763 NAE1Q13564 534 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 SNX20Q7Z614 316 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 CMTM8Q8IZV2 173 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 TTLL2Q9BWV7 592 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 ANGPT4Q9Y264 503 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 RGSL1A5PLK6 1076 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 LYPLA1O75608 230 aaPredicted RBP13.8□□□□□ -0.2
RPL28-202ENST00000426763 PDE5AO76074 875 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 NOS3P29474 1203 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 GHRHRQ02643 423 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 SLC10A7Q0GE19 358 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 LAPTM5Q13571 262 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 MS4A13Q5J8X5 152 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 SPOCK2Q92563 424 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 BORCS6Q96GS4 357 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 IL12RB2Q99665 862 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 PTPN18Q99952 460 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 MIOSQ9NXC5 875 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 COPG2Q9UBF2 871 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 PHF24Q9UPV7 400 aa13.8□□□□□ -0.2
RPL28-202ENST00000426763 GSNP06396 782 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 TYRP14679 529 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 EOGTQ5NDL2 527 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 TMEM154Q6P9G4 183 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 FOXR1Q6PIV2 292 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 C16orf62Q7Z3J2 963 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 MICU2Q8IYU8 434 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 RP9Q8TA86 221 aaKnown RBP13.79□□□□□ -0.2
RPL28-202ENST00000426763 HMGB4Q8WW32 186 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 OTUB2Q96DC9 234 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 SIPA1Q96FS4 1042 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 DPEP2Q9H4A9 486 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 CCDC177Q9NQR7 707 aaPredicted RBP13.79□□□□□ -0.2
RPL28-202ENST00000426763 EPHA3P29320 983 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 DGKEP52429 567 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 NDUFA9Q16795 377 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 GPR33Q49SQ1 333 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 ZNF544Q6NX49 715 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 CAMK1DQ8IU85 385 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 SRFBP1Q8NEF9 429 aaKnown RBP13.79□□□□□ -0.2
RPL28-202ENST00000426763 CYB5D2Q8WUJ1 264 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 PPCDCQ96CD2 204 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 FLRT1Q9NZU1 646 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 TIMP1P01033 207 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 C8GP07360 202 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 GNSP15586 552 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 SLC25A11Q02978 314 aaKnown RBP13.79□□□□□ -0.2
RPL28-202ENST00000426763 UBXN11Q5T124 520 aa13.79□□□□□ -0.2
RPL28-202ENST00000426763 CHST15Q7LFX5 561 aaPredicted RBP13.79□□□□□ -0.2
RPL28-202ENST00000426763 PARGQ86W56 976 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms