RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 SNX20Q7Z614 316 aa17.25■□□□□ 0.35
FN1-208ENST00000426059 SIDT2Q8NBJ9 832 aaKnown RBP17.25■□□□□ 0.35
FN1-208ENST00000426059 ZNF398Q8TD17 642 aa17.25■□□□□ 0.35
FN1-208ENST00000426059 C10orf82Q8WW14 230 aa17.25■□□□□ 0.35
FN1-208ENST00000426059 SCG3Q8WXD2 468 aaKnown RBP17.25■□□□□ 0.35
FN1-208ENST00000426059 OXSMQ9NWU1 459 aa17.25■□□□□ 0.35
FN1-208ENST00000426059 KLHL14Q9P2G3 628 aa17.25■□□□□ 0.35
FN1-208ENST00000426059 TSR3Q9UJK0 312 aaKnown RBP17.25■□□□□ 0.35
FN1-208ENST00000426059 TRIOO75962 3097 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 H3BMM5 538 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 SERPINE1P05121 402 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 ZNF37AP17032 561 aaPredicted RBP17.24■□□□□ 0.35
FN1-208ENST00000426059 ITGB6P18564 788 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 CHRM3P20309 590 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 KCNA5P22460 613 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 TSNAXIP1Q2TAA8 658 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 TECRLQ5HYJ1 363 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 AGAP9Q5VTM2 703 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 ZYG11AQ6WRX3 759 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 PARS2Q7L3T8 475 aaKnown RBP17.24■□□□□ 0.35
FN1-208ENST00000426059 HSD11B1LQ7Z5J1 315 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 CACUL1Q86Y37 369 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 SMRP1Q8NCR6 262 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 SCAMP4Q969E2 229 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 PTERQ96BW5 349 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 MRPL46Q9H2W6 279 aaKnown RBP17.24■□□□□ 0.35
FN1-208ENST00000426059 KCNK13Q9HB14 408 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 CYP4F12Q9HCS2 524 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 THAP1Q9NVV9 213 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 TAS2R13Q9NYV9 303 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 CRLS1Q9UJA2 301 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 APPL1Q9UKG1 709 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 PRSS21Q9Y6M0 314 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 PIKFYVEQ9Y2I7 2098 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 UPK3BL1B0FP48 263 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 UPK3BL2E5RIL1 263 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 ARNTLO00327 626 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 TRIM13O60858 407 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 TROVE2P10155 538 aaKnown RBP eCLIP17.24■□□□□ 0.35
FN1-208ENST00000426059 ITGALP20701 1170 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 XPAP23025 273 aaPredicted RBP17.24■□□□□ 0.35
FN1-208ENST00000426059 MTHFRP42898 656 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 ARHGEF7Q14155 803 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 ITPRIPL2Q3MIP1 535 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 ATP13A5Q4VNC0 1218 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 AARS2Q5JTZ9 985 aaKnown RBP17.24■□□□□ 0.35
FN1-208ENST00000426059 AGR3Q8TD06 166 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 EXT2Q93063 718 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 C7orf26Q96N11 449 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 GATA5Q9BWX5 397 aaPredicted RBP17.24■□□□□ 0.35
FN1-208ENST00000426059 TRIM55Q9BYV6 548 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 TMEM245Q9H330 911 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 CORO1CQ9ULV4 474 aaPredicted RBP17.24■□□□□ 0.35
FN1-208ENST00000426059 F5P12259 2224 aa17.24■□□□□ 0.35
FN1-208ENST00000426059 PTGER3P43115 390 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 VASPP50552 380 aaPredicted RBP17.23■□□□□ 0.35
FN1-208ENST00000426059 NAGLUP54802 743 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 EIF4HQ15056 248 aaKnown RBP17.23■□□□□ 0.35
FN1-208ENST00000426059 Q6ZVL8 140 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 RPS27LQ71UM5 84 aaKnown RBP17.23■□□□□ 0.35
FN1-208ENST00000426059 ISCA2Q86U28 154 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 TXNDC5Q8NBS9 432 aaKnown RBP17.23■□□□□ 0.35
FN1-208ENST00000426059 GIMAP7Q8NHV1 300 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 RAB3IL1Q8TBN0 382 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 SORT1Q99523 831 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 MRPL57Q9BQC6 102 aaKnown RBP17.23■□□□□ 0.35
FN1-208ENST00000426059 SHCBP1LQ9BZQ2 653 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 LMCD1Q9NZU5 365 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 IKZF3Q9UKT9 509 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 PLXNB3Q9ULL4 1909 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 IL1BP01584 269 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 APOA4P06727 396 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 EPHX1P07099 455 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 CD1DP15813 335 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 ETV3P41162 512 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 SPINT3P49223 89 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 SUOXP51687 545 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 OR6Y1Q8NGX8 325 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 PIP4K2CQ8TBX8 421 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.23■□□□□ 0.35
FN1-208ENST00000426059 FAM129BQ96TA1 746 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 OSBPL1AQ9BXW6 950 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 P2RY12Q9H244 342 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 PNPOQ9NVS9 261 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 DNAJC16Q9Y2G8 782 aa17.23■□□□□ 0.35
FN1-208ENST00000426059 EDDM13A0A1B0GTR0 161 aa17.22■□□□□ 0.35
FN1-208ENST00000426059 CCT8L1PA6NM43 557 aa17.22■□□□□ 0.35
FN1-208ENST00000426059 E5RI56 91 aa17.22■□□□□ 0.35
FN1-208ENST00000426059 PFDN6O15212 129 aa17.22■□□□□ 0.35
FN1-208ENST00000426059 ECI2O75521 394 aa17.22■□□□□ 0.35
FN1-208ENST00000426059 CHRNGP07510 517 aa17.22■□□□□ 0.35
FN1-208ENST00000426059 ACRV1P26436 265 aa17.22■□□□□ 0.35
FN1-208ENST00000426059 VIPR1P32241 457 aa17.22■□□□□ 0.35
FN1-208ENST00000426059 SEC13P55735 322 aa17.22■□□□□ 0.35
FN1-208ENST00000426059 ABCE1P61221 599 aaKnown RBP17.22■□□□□ 0.35
FN1-208ENST00000426059 ACAP2Q15057 778 aa17.22■□□□□ 0.35
FN1-208ENST00000426059 AAK1Q2M2I8 961 aa17.22■□□□□ 0.35
FN1-208ENST00000426059 KLC3Q6P597 504 aa17.22■□□□□ 0.35
FN1-208ENST00000426059 TRPM8Q7Z2W7 1104 aa17.22■□□□□ 0.35
FN1-208ENST00000426059 LCA5Q86VQ0 697 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms