RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 SMIM14Q96QK8 99 aa12.67□□□□□ -0.38
SGCE-203ENST00000425444 LGR4Q9BXB1 951 aa12.67□□□□□ -0.38
SGCE-203ENST00000425444 CARS2Q9HA77 564 aaKnown RBP12.67□□□□□ -0.38
SGCE-203ENST00000425444 PLEKHB1Q9UF11 243 aaPredicted RBP12.67□□□□□ -0.38
SGCE-203ENST00000425444 CD84Q9UIB8 345 aa12.67□□□□□ -0.38
SGCE-203ENST00000425444 PADI4Q9UM07 663 aa12.67□□□□□ -0.38
SGCE-203ENST00000425444 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.67□□□□□ -0.38
SGCE-203ENST00000425444 PCDHGA4Q9Y5G9 962 aa12.67□□□□□ -0.38
SGCE-203ENST00000425444 OTOGQ6ZRI0 2925 aa12.66□□□□□ -0.38
SGCE-203ENST00000425444 C1orf232A0A0U1RR37 186 aa12.66□□□□□ -0.38
SGCE-203ENST00000425444 PRSS38A1L453 326 aa12.66□□□□□ -0.38
SGCE-203ENST00000425444 TNFRSF10CO14798 259 aa12.66□□□□□ -0.38
SGCE-203ENST00000425444 PLD2O14939 933 aa12.66□□□□□ -0.38
SGCE-203ENST00000425444 CST8O60676 142 aa12.66□□□□□ -0.38
SGCE-203ENST00000425444 TCEA3O75764 348 aa12.66□□□□□ -0.38
SGCE-203ENST00000425444 NDUFA10O95299 355 aa12.66□□□□□ -0.38
SGCE-203ENST00000425444 CASRP41180 1078 aa12.66□□□□□ -0.38
SGCE-203ENST00000425444 CDKN2BP42772 138 aa12.66□□□□□ -0.38
SGCE-203ENST00000425444 RPL26P61254 145 aaKnown RBP12.66□□□□□ -0.38
SGCE-203ENST00000425444 CDK3Q00526 305 aa12.66□□□□□ -0.38
SGCE-203ENST00000425444 GALNT3Q14435 633 aa12.66□□□□□ -0.38
SGCE-203ENST00000425444 PERM1Q5SV97 790 aa12.66□□□□□ -0.38
SGCE-203ENST00000425444 C11orf63Q6NUN7 778 aa12.66□□□□□ -0.38
SGCE-203ENST00000425444 DOK6Q6PKX4 331 aa12.66□□□□□ -0.38
SGCE-203ENST00000425444 B4GALNT4Q76KP1 1039 aa12.66□□□□□ -0.38
SGCE-203ENST00000425444 BZW1Q7L1Q6 419 aaKnown RBP12.66□□□□□ -0.38
SGCE-203ENST00000425444 VASH2Q86V25 355 aa12.66□□□□□ -0.38
SGCE-203ENST00000425444 KYQ8NBH2 561 aa12.66□□□□□ -0.38
SGCE-203ENST00000425444 RBM41Q96IZ5 413 aaKnown RBP12.66□□□□□ -0.38
SGCE-203ENST00000425444 RBM15Q96T37 977 aaKnown RBP eCLIP12.66□□□□□ -0.38
SGCE-203ENST00000425444 TEX101Q9BY14 249 aa12.66□□□□□ -0.38
SGCE-203ENST00000425444 ADGRE3Q9BY15 652 aa12.66□□□□□ -0.38
SGCE-203ENST00000425444 BRD8Q9H0E9 1235 aa12.66□□□□□ -0.38
SGCE-203ENST00000425444 TMEM168Q9H0V1 697 aa12.66□□□□□ -0.38
SGCE-203ENST00000425444 RPL26L1Q9UNX3 145 aaKnown RBP12.66□□□□□ -0.38
SGCE-203ENST00000425444 PCDHGA7Q9Y5G6 932 aa12.66□□□□□ -0.38
SGCE-203ENST00000425444 EPN1Q9Y6I3 576 aaPredicted RBP12.66□□□□□ -0.38
SGCE-203ENST00000425444 LRP4O75096 1905 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 B4DGG1 531 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 ZRANB2O95218 330 aaKnown RBP eCLIP12.65□□□□□ -0.38
SGCE-203ENST00000425444 PYGLP06737 847 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 GNPDA1P46926 289 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 MARCKSL1P49006 195 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 NR2C2P49116 596 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 IHHQ14623 411 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 PCSK7Q16549 785 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 FAM182AQ5T1J6 154 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 KDELC2Q7Z4H8 507 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 TECPR1Q7Z6L1 1165 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 NT5DC3Q86UY8 548 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 GAS2L3Q86XJ1 694 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 KATNAL2Q8IYT4 538 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 FBXO39Q8N4B4 442 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 CNTD1Q8N815 330 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 FAM46DQ8NEK8 389 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 CCHCR1Q8TD31 782 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 TFB1MQ8WVM0 346 aaKnown RBP12.65□□□□□ -0.38
SGCE-203ENST00000425444 P3H4Q92791 437 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 SCAMP4Q969E2 229 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 HAUS1Q96CS2 278 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 CCDC3Q9BQI4 270 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 MLPHQ9BV36 600 aaPredicted RBP12.65□□□□□ -0.38
SGCE-203ENST00000425444 ABCG8Q9H221 673 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 ADNPQ9H2P0 1102 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 DPEP2Q9H4A9 486 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 PKD2L2Q9NZM6 624 aa12.65□□□□□ -0.38
SGCE-203ENST00000425444 CELSR1Q9NYQ6 3014 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 ANKRD66B4E2M5 251 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 CASC3O15234 703 aaKnown RBP12.64□□□□□ -0.39
SGCE-203ENST00000425444 CLDN7O95471 211 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 PRLP01236 227 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 SLC4A1P02730 911 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 MMP2P08253 660 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 LIPCP11150 499 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 PECAM1P16284 738 aaPredicted RBP12.64□□□□□ -0.39
SGCE-203ENST00000425444 TEAD1P28347 426 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 TNNT3P45378 269 aaPredicted RBP12.64□□□□□ -0.39
SGCE-203ENST00000425444 STC1P52823 247 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 RIPPLY3P57055 190 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 PTSQ03393 145 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 DPTQ07507 201 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 ILF3Q12906 894 aaKnown RBP eCLIP12.64□□□□□ -0.39
SGCE-203ENST00000425444 SPIDRQ14159 915 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 QPCTQ16769 361 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 TFDP3Q5H9I0 405 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 CCDC181Q5TID7 509 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 ADAMTSL4Q6UY14 1074 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 RFLNAQ6ZTI6 216 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 ZNF765Q7L2R6 523 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 KIAA1328Q86T90 577 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 RCOR2Q8IZ40 523 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 NRSN1Q8IZ57 195 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 CBARPQ8N350 705 aaPredicted RBP12.64□□□□□ -0.39
SGCE-203ENST00000425444 OR6C4Q8NGE1 309 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 WDR48Q8TAF3 677 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 KIAA1524Q8TCG1 905 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 HTR3CQ8WXA8 447 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 CCDC74AQ96AQ1 378 aa12.64□□□□□ -0.39
SGCE-203ENST00000425444 IMP4Q96G21 291 aaKnown RBP12.64□□□□□ -0.39
SGCE-203ENST00000425444 FRMD8Q9BZ67 464 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms