RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 KCNC1P48547 511 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 STX1BP61266 288 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 LIPEQ05469 1076 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 PPIL2Q13356 520 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 CCBE1Q6UXH8 406 aaPredicted RBP11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 USP51Q70EK9 711 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 CYS1Q717R9 158 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 GET4Q7L5D6 327 aaPredicted RBP11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 THAP5Q7Z6K1 395 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 SPATA22Q8NHS9 363 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 COQ7Q99807 217 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 MYOCQ99972 504 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 KCTD14Q9BQ13 255 aaPredicted RBP11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 INTS7Q9NVH2 962 aaKnown RBP11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 ERVK-18Q9QC07 812 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 FBXO10Q9UK96 956 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 STYXL1Q9Y6J8 313 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 TARM1B6A8C7 271 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 TFECO14948 347 aaPredicted RBP11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 TOMM70O94826 608 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 DDX5P17844 614 aaKnown RBP11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 HOXD10P28358 340 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 PAGE3Q5JUK9 113 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 SPANXN3Q5MJ09 141 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 FKBP1CQ5VVH2 108 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 FKBP9P1Q75LS8 142 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 STRADAQ7RTN6 431 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 SAMD7Q7Z3H4 446 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 FAM83AQ86UY5 434 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 C8orf59Q8N0T1 100 aaPredicted RBP11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 PNPT1Q8TCS8 783 aaKnown RBP11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 CHAC2Q8WUX2 184 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 LRRC58Q96CX6 371 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 TEPSINQ96N21 525 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 HBEGFQ99075 208 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 ZNF670Q9BS34 389 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 YTHDF1Q9BYJ9 559 aaKnown RBP11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 AMBRA1Q9C0C7 1298 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 NTN4Q9HB63 628 aa11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 RABL2AQ9UBK7 228 aaPredicted RBP11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 ZNF638Q14966 1978 aaKnown RBP11.25□□□□□ -0.61
SEC61A1-202ENST00000424880 FAM95CA0A1B0GW59 222 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 DYRK3O43781 588 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 SCO1O75880 301 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 ALX3O95076 343 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 SLC4A1P02730 911 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 PRKACBP22694 351 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 IFNA8P32881 189 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 OR4D2P58180 307 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 TUBA3CQ13748 450 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 HIST2H2ACQ16777 129 aaPredicted RBP11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 C6orf141Q5SZD1 244 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 LAIR2Q6ISS4 152 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 ZCCHC8Q6NZY4 707 aaKnown RBP11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 OTOP3Q7RTS5 596 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 ELMOD2Q8IZ81 293 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 CHDHQ8NE62 594 aaPredicted RBP11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 NLGN2Q8NFZ4 835 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 OR6Q1Q8NGQ2 317 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 FBXO30Q8TB52 745 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 TRAPPC12Q8WVT3 735 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 SLC10A4Q96EP9 437 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 NODALQ96S42 347 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 PORCNQ9H237 461 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 DSN1Q9H410 356 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 RUBCNLQ9H714 662 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 CDHR5Q9HBB8 845 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 ANAPC2Q9UJX6 822 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 NDUFAF1Q9Y375 327 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 FER1L6Q2WGJ9 1857 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 CYP7B1O75881 506 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 MT-CYBP00156 380 aaPredicted RBP11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 DBTP11182 482 aaKnown RBP11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 STMN1P16949 149 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 GSTM2P28161 218 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 ADORA2BP29275 332 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 NFYCQ13952 458 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 ESRP1Q6NXG1 681 aaKnown RBP11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 SPESP1Q6UW49 350 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 SLC43A3Q8NBI5 491 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 UBE2FQ969M7 185 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 DEPDC7Q96QD5 511 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 TBCBQ99426 244 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 CXCL16Q9H2A7 254 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 SLCO1B7G3V0H7 640 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 FAM72CH0Y354 149 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 TMCC2O75069 709 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 CILPO75339 1184 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 FTH1P02794 183 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 THRBP10828 461 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 CLCNKBP51801 687 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 MTPNP58546 118 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 SIM2Q14190 667 aaPredicted RBP11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 FRG1Q14331 258 aaKnown RBP11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 SURF1Q15526 300 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 MAPRE2Q15555 327 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 NOMO2Q5JPE7 1267 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 FAM72AQ5TYM5 149 aa11.24□□□□□ -0.61
SEC61A1-202ENST00000424880 FAM72DQ6L9T8 149 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms