RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 ARHGEF17Q96PE2 2063 aaPredicted RBP6.25□□□□□ -1.41
SDCBP-203ENST00000424270 GOLGA6L3A6NEY3 463 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 PDXKO00764 312 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 KIF1CO43896 1103 aaKnown RBP6.24□□□□□ -1.41
SDCBP-203ENST00000424270 HSF2BPO75031 334 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 VIPP01282 170 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 HEXAP06865 529 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 EBLN1P0CF75 366 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 TBXAS1P24557 533 aaPredicted RBP6.24□□□□□ -1.41
SDCBP-203ENST00000424270 RPL13P26373 211 aaKnown RBP6.24□□□□□ -1.41
SDCBP-203ENST00000424270 CASP1P29466 404 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 GTF2H1P32780 548 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 PSMC2P35998 433 aaKnown RBP6.24□□□□□ -1.41
SDCBP-203ENST00000424270 TRIM23P36406 574 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 CA7P43166 264 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 SULT1E1P49888 294 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 CDK3Q00526 305 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 PAK1Q13153 545 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 LRP8Q14114 963 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 GRM3Q14832 879 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 AGERQ15109 404 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.24□□□□□ -1.41
SDCBP-203ENST00000424270 B3GNTL1Q67FW5 361 aaPredicted RBP6.24□□□□□ -1.41
SDCBP-203ENST00000424270 BRAT1Q6PJG6 821 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 TAB3Q8N5C8 712 aaPredicted RBP6.24□□□□□ -1.41
SDCBP-203ENST00000424270 LZTR1Q8N653 840 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 IQUBQ8NA54 791 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 ACRBPQ8NEB7 543 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 PPP4R1Q8TF05 950 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 MAGED4Q96JG8 741 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 AGAP3Q96P47 875 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 IP6K3Q96PC2 410 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 HERPUD2Q9BSE4 406 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 NLNQ9BYT8 704 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 CXXC4Q9H2H0 198 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 OSGEPL1Q9H4B0 414 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 SUV39H2Q9H5I1 410 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 ZNF552Q9H707 407 aaPredicted RBP6.24□□□□□ -1.41
SDCBP-203ENST00000424270 ATP13A2Q9NQ11 1180 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 DMAC2Q9NW81 257 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 CPNE7Q9UBL6 633 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 GPN3Q9UHW5 284 aaPredicted RBP6.24□□□□□ -1.41
SDCBP-203ENST00000424270 DNAI1Q9UI46 699 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 KCNK6Q9Y257 313 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 NBEAL1Q6ZS30 2694 aa6.24□□□□□ -1.41
SDCBP-203ENST00000424270 ANKRD36A6QL64 1941 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 PKDREJQ9NTG1 2253 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 DRGXA6NNA5 263 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 FOXO6A8MYZ6 492 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 PCDH17O14917 1159 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 INSIG1O15503 277 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 MED7O43513 233 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 RAMP2O60895 175 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 EML2O95834 649 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 C9P02748 559 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 FUCA1P04066 466 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 IVLP07476 585 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 RAB40ALP0C0E4 278 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 KRT5P13647 590 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 ACP5P13686 325 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 FOLR1P15328 257 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 NELFEP18615 380 aaKnown RBP6.23□□□□□ -1.41
SDCBP-203ENST00000424270 AGAP20933 346 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 AGXTP21549 392 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 SERPINA4P29622 427 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 FOLR3P41439 243 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 GPR1P46091 355 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 POLR2LP62875 67 aaKnown RBP6.23□□□□□ -1.41
SDCBP-203ENST00000424270 DEUP1Q05D60 604 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 GPS2Q13227 327 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 C5orf22Q49AR2 442 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 BRMS1LQ5PSV4 323 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 TMTC4Q5T4D3 741 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 AGAP7PQ5VUJ5 663 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 DENND1BQ6P3S1 775 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 LIPIQ6XZB0 460 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 MRGPREQ86SM8 312 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 TRIM74Q86UV6 250 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 BPHLQ86WA6 291 aaPredicted RBP6.23□□□□□ -1.41
SDCBP-203ENST00000424270 DNAAF5Q86Y56 855 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 CAMK1DQ8IU85 385 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 PHYKPLQ8IUZ5 450 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 CBARPQ8N350 705 aaPredicted RBP6.23□□□□□ -1.41
SDCBP-203ENST00000424270 PPM1KQ8N3J5 372 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 ANKRD20A12PQ8NF67 263 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 OR1N1Q8NGS0 311 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 CPT1BQ92523 772 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 ZNF514Q96K75 400 aaPredicted RBP6.23□□□□□ -1.41
SDCBP-203ENST00000424270 AGAP4Q96P64 663 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 FCRL4Q96PJ5 515 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 C7orf25Q9BPX7 421 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 TEX101Q9BY14 249 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 FRMD8Q9BZ67 464 aaPredicted RBP6.23□□□□□ -1.41
SDCBP-203ENST00000424270 ATP13A3Q9H7F0 1226 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 FANCEQ9HB96 536 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 DLL4Q9NR61 685 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 NDFIP2Q9NV92 336 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 KBTBD4Q9NVX7 518 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 SOHLH2Q9NX45 425 aa6.23□□□□□ -1.41
SDCBP-203ENST00000424270 DNAJB12Q9NXW2 375 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms