RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 CDH19Q9H159 772 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 DPH5Q9H2P9 285 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 GAREM1Q9H706 876 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 WDR26Q9H7D7 661 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 UGT1A7Q9HAW7 530 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 UGT1A10Q9HAW8 530 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 UGT1A8Q9HAW9 530 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 IL21RQ9HBE5 538 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 CHRAC1Q9NRG0 131 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 PHPT1Q9NRX4 125 aaPredicted RBP9.22□□□□□ -0.93
PDGFC-202ENST00000422544 GPR27Q9NS67 375 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 SYBUQ9NX95 663 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 BFARQ9NZS9 450 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 SLC2A6Q9UGQ3 507 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 FKBPLQ9UIM3 349 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 ANAPC5Q9UJX4 755 aa9.22□□□□□ -0.93
PDGFC-202ENST00000422544 CNOT6Q9ULM6 557 aaKnown RBP9.22□□□□□ -0.93
PDGFC-202ENST00000422544 GLYATL1P3A0A0U1RQE8 302 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 HEATR9A2RTY3 570 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 TMEM202A6NGA9 273 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 SDR42E2A6NKP2 422 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 CACNB4O00305 520 aaPredicted RBP9.21□□□□□ -0.94
PDGFC-202ENST00000422544 CDX4O14627 284 aaPredicted RBP9.21□□□□□ -0.94
PDGFC-202ENST00000422544 TOR1BO14657 336 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 TP73O15350 636 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 GPR39O43194 453 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 GDF9O60383 454 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 PPFIA2O75334 1257 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 SEC31AO94979 1220 aaKnown RBP9.21□□□□□ -0.94
PDGFC-202ENST00000422544 PYGLP06737 847 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 HOXC4P09017 264 aaPredicted RBP9.21□□□□□ -0.94
PDGFC-202ENST00000422544 MLNP12872 115 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 HTR1BP28222 390 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 TEAD1P28347 426 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 CA5AP35218 305 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 POLD2P49005 469 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 ARSDP51689 593 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 IL9RQ01113 521 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 EIF2B5Q13144 721 aaKnown RBP9.21□□□□□ -0.94
PDGFC-202ENST00000422544 LAMB3Q13751 1172 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 NFATC4Q14934 902 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 MORF4L2Q15014 288 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 TRADDQ15628 312 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 SKIDA1Q1XH10 827 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 ATP13A5Q4VNC0 1218 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 FNBP1LQ5T0N5 605 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 ZNF648Q5T619 568 aaPredicted RBP9.21□□□□□ -0.94
PDGFC-202ENST00000422544 TSTD2Q5T7W7 516 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 DUPD1Q68J44 220 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 HIBCHQ6NVY1 386 aaPredicted RBP9.21□□□□□ -0.94
PDGFC-202ENST00000422544 C8orf74Q6P047 294 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 DOK6Q6PKX4 331 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 IL27RAQ6UWB1 636 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 HOOK3Q86VS8 718 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 MPP5Q8N3R9 675 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 MINDY1Q8N5J2 469 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 GPR161Q8N6U8 529 aaKnown RBP9.21□□□□□ -0.94
PDGFC-202ENST00000422544 PPHLN1Q8NEY8 458 aaKnown RBP9.21□□□□□ -0.94
PDGFC-202ENST00000422544 ZNF398Q8TD17 642 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 STYXQ8WUJ0 223 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 TSACCQ96A04 125 aaPredicted RBP9.21□□□□□ -0.94
PDGFC-202ENST00000422544 CDKN2AIPNLQ96HQ2 116 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 HIC2Q96JB3 615 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 ZNF778Q96MU6 729 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 PWWP2AQ96N64 755 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 PLEKHG4BQ96PX9 1271 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 RANBP9Q96S59 729 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 ELF4Q99607 663 aaPredicted RBP9.21□□□□□ -0.94
PDGFC-202ENST00000422544 ZSCAN5AQ9BUG6 496 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 EDEM2Q9BV94 578 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 IL22Q9GZX6 179 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 SUDS3Q9H7L9 328 aaPredicted RBP9.21□□□□□ -0.94
PDGFC-202ENST00000422544 ERVMER34-1Q9H9K5 563 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 XAB2Q9HCS7 855 aaKnown RBP9.21□□□□□ -0.94
PDGFC-202ENST00000422544 ARFGAP3Q9NP61 516 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 NLE1Q9NVX2 485 aaPredicted RBP9.21□□□□□ -0.94
PDGFC-202ENST00000422544 NFKBIL1Q9UBC1 381 aaPredicted RBP9.21□□□□□ -0.94
PDGFC-202ENST00000422544 KLF15Q9UIH9 416 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 METRNQ9UJH8 293 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 TMPRSS11EQ9UL52 423 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 PNMA8BQ9ULN7 279 aaPredicted RBP9.21□□□□□ -0.94
PDGFC-202ENST00000422544 TMEM98Q9Y2Y6 226 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 UTP11Q9Y3A2 253 aaKnown RBP9.21□□□□□ -0.94
PDGFC-202ENST00000422544 TCAF1Q9Y4C2 921 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 CEP192Q8TEP8 1941 aa9.21□□□□□ -0.94
PDGFC-202ENST00000422544 C4orf47A7E2U8 309 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 GAPDHSO14556 408 aaPredicted RBP9.2□□□□□ -0.94
PDGFC-202ENST00000422544 SCAMP1O15126 338 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 FOXD2O60548 495 aaPredicted RBP9.2□□□□□ -0.94
PDGFC-202ENST00000422544 SRP72O76094 671 aaKnown RBP9.2□□□□□ -0.94
PDGFC-202ENST00000422544 SLC25A14O95258 325 aaPredicted RBP9.2□□□□□ -0.94
PDGFC-202ENST00000422544 ASMTLO95671 621 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 CER1O95813 267 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 MYCLP1P12525 358 aaPredicted RBP9.2□□□□□ -0.94
PDGFC-202ENST00000422544 PSMA3P25788 255 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 MC4RP32245 332 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 HADHAP40939 763 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 KIAA1024LP59773 190 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 XIAPP98170 497 aa9.2□□□□□ -0.94
PDGFC-202ENST00000422544 PEX6Q13608 980 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms