RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 LATS1O95835 1130 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 IGLV3-19P01714 112 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 TYRP14679 529 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 GATA3P23771 443 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 ACP1P24666 158 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 CERS1P27544 350 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 RPA1P27694 616 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 PCSK1P29120 753 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 CCKARP32238 428 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 PNPLA4P41247 253 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 MMP13P45452 471 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 LIG4P49917 911 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 ASIC1P78348 528 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 CDK17Q00537 523 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 GOLGA8FQ08AF8 430 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 GOLGA8DPQ0D2H9 430 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 PDIA5Q14554 519 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 ADCK5Q3MIX3 580 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 CFAP221Q4G0U5 840 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 C3orf38Q5JPI3 329 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 JADE1Q6IE81 842 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 BLOC1S2Q6QNY1 142 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 TPGS1Q6ZTW0 290 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 TMEM25Q86YD3 366 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 CCDC83Q8IWF9 413 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 ARL14Q8N4G2 192 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 Q8NA96 180 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 GPR156Q8NFN8 814 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 SAP25Q8TEE9 199 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 BIRC7Q96CA5 298 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 SGF29Q96ES7 293 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 CEP295NLQ96MC4 621 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 SEMA3CQ99985 751 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 TRIM9Q9C026 710 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 SLC25A18Q9H1K4 315 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 GSTO2Q9H4Y5 243 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 C6orf106Q9H6K1 298 aaPredicted RBP5.07□□□□□ -1.6
SFXN1-202ENST00000421887 C17orf75Q9HAS0 396 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 ARNT2Q9HBZ2 717 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 GDF3Q9NR23 364 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 TMLHEQ9NVH6 421 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 DPP3Q9NY33 737 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 SLC23A1Q9UHI7 598 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 GTF3C4Q9UKN8 822 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 CKAP5Q14008 2032 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 ICE1Q9Y2F5 2266 aa5.07□□□□□ -1.6
SFXN1-202ENST00000421887 ANKRD17O75179 2603 aaKnown RBP5.06□□□□□ -1.6
SFXN1-202ENST00000421887 CDHR4A6H8M9 788 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 FAM47DPA6NHR8 397 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 PRRT4C9JH25 899 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 H0YCG3 227 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 GABRDO14764 452 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 HNRNPDLO14979 420 aaKnown RBP5.06□□□□□ -1.6
SFXN1-202ENST00000421887 CACNG3O60359 315 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 CSO75390 466 aaKnown RBP5.06□□□□□ -1.6
SFXN1-202ENST00000421887 OR52Z1P0C646 297 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 IRF1P10914 325 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 MUTP22033 750 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 CCND1P24385 295 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 ACAT1P24752 427 aaKnown RBP5.06□□□□□ -1.6
SFXN1-202ENST00000421887 EPHA8P29322 1005 aaPredicted RBP5.06□□□□□ -1.6
SFXN1-202ENST00000421887 ACSL1P33121 698 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 CCT6AP40227 531 aaKnown RBP5.06□□□□□ -1.6
SFXN1-202ENST00000421887 NR4A2P43354 598 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 LHX1P48742 406 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 OCRLQ01968 901 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 MAPRE1Q15691 268 aaKnown RBP5.06□□□□□ -1.6
SFXN1-202ENST00000421887 NPY5RQ15761 445 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 IGFBP7Q16270 282 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 GFOD2Q3B7J2 385 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 LINC00303Q3SY05 128 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 TTC31Q49AM3 519 aaPredicted RBP5.06□□□□□ -1.6
SFXN1-202ENST00000421887 MIDNQ504T8 468 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 KCNT1Q5JUK3 1230 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 NXNQ6DKJ4 435 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 HIST2H2BCQ6DN03 193 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 VSTM1Q6UX27 236 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 SERPINA13PQ6UXR4 307 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 BBS7Q8IWZ6 715 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 TMEM86AQ8N2M4 240 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 SPATA20Q8TB22 786 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 MYCBPAPQ8TBZ2 947 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 TBC1D15Q8TC07 691 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 GANCQ8TET4 914 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 SPATA17Q96L03 361 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 AIFM3Q96NN9 605 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 MSTO1Q9BUK6 570 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 CCSER1Q9C0I3 900 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 LHX5Q9H2C1 402 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 ASCL3Q9NQ33 180 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 LSM7Q9UK45 103 aaKnown RBP5.06□□□□□ -1.6
SFXN1-202ENST00000421887 SATB2Q9UPW6 733 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 NCKAP1Q9Y2A7 1128 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 DERAQ9Y315 318 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 SLCO1B1Q9Y6L6 691 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 UBR5O95071 2799 aaPredicted RBP5.06□□□□□ -1.6
SFXN1-202ENST00000421887 TDRD6O60522 2096 aaKnown RBP5.06□□□□□ -1.6
SFXN1-202ENST00000421887 LRRK1Q38SD2 2015 aa5.06□□□□□ -1.6
SFXN1-202ENST00000421887 SPTBN1Q01082 2364 aaKnown RBP5.05□□□□□ -1.6
SFXN1-202ENST00000421887 A0A1W2PPC4 97 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms