RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 ASPMQ8IZT6 3477 aa7.01□□□□□ -1.29
HMGN1-205ENST00000419378 WDFY3Q8IZQ1 3526 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 TBC1D3DA0A087WVF3 549 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 TBC1D3IA0A087WXS9 549 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 TBC1D3EA0A087X179 549 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 TBC1D3KA0A087X1G2 549 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 TBC1D3FA6NER0 549 aaPredicted RBP7□□□□□ -1.29
HMGN1-205ENST00000419378 TBC1D3LB9A6J9 549 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 MYO1FO00160 1098 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 KRIT1O00522 736 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 DAPK3O43293 454 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 BUB1O43683 1085 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 AKR1B10O60218 316 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 PRAMEF11O60813 436 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 GJB3O75712 270 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 KCNK5O95279 499 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 CER1O95813 267 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 NTRK1P04629 796 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 TMEM253P0C7T8 217 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 TBC1D3HP0C7X1 549 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 ERCC2P18074 760 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 CSRP1P21291 193 aaKnown RBP7□□□□□ -1.29
HMGN1-205ENST00000419378 GKP32189 559 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 NOVA1P51513 510 aaKnown RBP7□□□□□ -1.29
HMGN1-205ENST00000419378 NEK3P51956 506 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 ZNF135P52742 658 aaPredicted RBP7□□□□□ -1.29
HMGN1-205ENST00000419378 NDST2P52849 883 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 GP2P55259 537 aaKnown RBP7□□□□□ -1.29
HMGN1-205ENST00000419378 SNRPD1P62314 119 aaKnown RBP7□□□□□ -1.29
HMGN1-205ENST00000419378 SLC25A11Q02978 314 aaKnown RBP7□□□□□ -1.29
HMGN1-205ENST00000419378 TBX2Q13207 712 aaPredicted RBP7□□□□□ -1.29
HMGN1-205ENST00000419378 KIF19Q2TAC6 998 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 BOLA3Q53S33 107 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 INO80DQ53TQ3 878 aaPredicted RBP7□□□□□ -1.29
HMGN1-205ENST00000419378 ATXN7L2Q5T6C5 722 aaPredicted RBP7□□□□□ -1.29
HMGN1-205ENST00000419378 AFMIDQ63HM1 303 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 TBC1D3GQ6DHY5 549 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 TBC1D3CQ6IPX1 549 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 IL27RAQ6UWB1 636 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 ERN2Q76MJ5 926 aaKnown RBP7□□□□□ -1.29
HMGN1-205ENST00000419378 PARS2Q7L3T8 475 aaKnown RBP7□□□□□ -1.29
HMGN1-205ENST00000419378 OVCH1Q7RTY7 1134 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 TRIM69Q86WT6 500 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 CNGA4Q8IV77 575 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 ARHGAP12Q8IWW6 846 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 TBC1D3Q8IZP1 549 aaPredicted RBP7□□□□□ -1.29
HMGN1-205ENST00000419378 AFAP1L2Q8N4X5 818 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 NETO2Q8NC67 525 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 DEFB124Q8NES8 71 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 OR2AP1Q8NGE2 309 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 TEKT4Q8WW24 435 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 CASKIN2Q8WXE0 1202 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 CTNNBL1Q8WYA6 563 aaPredicted RBP7□□□□□ -1.29
HMGN1-205ENST00000419378 HSPH1Q92598 858 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 VOPP1Q96AW1 172 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 LRIG1Q96JA1 1093 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 GDAP1L1Q96MZ0 367 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 CHP1Q99653 195 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 HEPHQ9BQS7 1158 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 TRIM5Q9C035 493 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 SLC39A8Q9C0K1 460 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 RNF32Q9H0A6 362 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 GAREM1Q9H706 876 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 ZWILCHQ9H900 591 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 IL21RQ9HBE5 538 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 PREBQ9HCU5 417 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 AASDHPPTQ9NRN7 309 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 STAU2Q9NUL3 570 aaKnown RBP eCLIP7□□□□□ -1.29
HMGN1-205ENST00000419378 SPTLC3Q9NUV7 552 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 DONSONQ9NYP3 566 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 CWC15Q9P013 229 aaKnown RBP7□□□□□ -1.29
HMGN1-205ENST00000419378 CTTNBP2NLQ9P2B4 639 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 UBA2Q9UBT2 640 aaPredicted RBP7□□□□□ -1.29
HMGN1-205ENST00000419378 ANKRD6Q9Y2G4 727 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 ATP8A1Q9Y2Q0 1164 aa7□□□□□ -1.29
HMGN1-205ENST00000419378 TP53BP1Q12888 1972 aaPredicted RBP7□□□□□ -1.29
HMGN1-205ENST00000419378 FRYQ5TBA9 3013 aa6.99□□□□□ -1.29
HMGN1-205ENST00000419378 CHD8Q9HCK8 2581 aa6.99□□□□□ -1.29
HMGN1-205ENST00000419378 TMEM131Q92545 1883 aa6.99□□□□□ -1.29
HMGN1-205ENST00000419378 A0A1W2PR77 199 aa6.99□□□□□ -1.29
HMGN1-205ENST00000419378 ARHGAP42A6NI28 874 aa6.99□□□□□ -1.29
HMGN1-205ENST00000419378 ZNF891A8MT65 544 aaPredicted RBP6.99□□□□□ -1.29
HMGN1-205ENST00000419378 AKR1B15C9JRZ8 316 aaPredicted RBP6.99□□□□□ -1.29
HMGN1-205ENST00000419378 J3KR12 359 aa6.99□□□□□ -1.29
HMGN1-205ENST00000419378 DFFAO00273 331 aa6.99□□□□□ -1.29
HMGN1-205ENST00000419378 VILLO15195 856 aa6.99□□□□□ -1.29
HMGN1-205ENST00000419378 PROSCO94903 275 aa6.99□□□□□ -1.29
HMGN1-205ENST00000419378 IGSF6O95976 241 aa6.99□□□□□ -1.29
HMGN1-205ENST00000419378 WNT1P04628 370 aa6.99□□□□□ -1.29
HMGN1-205ENST00000419378 UGT2B4P06133 528 aa6.99□□□□□ -1.29
HMGN1-205ENST00000419378 ADRB1P08588 477 aa6.99□□□□□ -1.29
HMGN1-205ENST00000419378 H2AFZP0C0S5 128 aa6.99□□□□□ -1.29
HMGN1-205ENST00000419378 GLI4P10075 376 aa6.99□□□□□ -1.29
HMGN1-205ENST00000419378 ADRB3P13945 408 aa6.99□□□□□ -1.29
HMGN1-205ENST00000419378 CD59P13987 128 aa6.99□□□□□ -1.29
HMGN1-205ENST00000419378 PNLIPP16233 465 aa6.99□□□□□ -1.29
HMGN1-205ENST00000419378 KRT15P19012 456 aa6.99□□□□□ -1.29
HMGN1-205ENST00000419378 MAT2AP31153 395 aaKnown RBP6.99□□□□□ -1.29
HMGN1-205ENST00000419378 NUDT1P36639 197 aa6.99□□□□□ -1.29
HMGN1-205ENST00000419378 ARL4AP40617 200 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms