RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 TRIM73Q86UV7 250 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 DCP1BQ8IZD4 617 aaKnown RBP15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 BBS5Q8N3I7 341 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 PDZD8Q8NEN9 1154 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 GPR152Q8TDT2 470 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 GTF3C2Q8WUA4 911 aaPredicted RBP15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 COG8Q96MW5 612 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 HBEGFQ99075 208 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 MTG1Q9BT17 334 aaPredicted RBP15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 CCDC68Q9H2F9 335 aa15.1■□□□□ 0.01
SEMA3B-203ENST00000419007 CCDC154A6NI56 674 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 RASAL1O95294 804 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 PEX11BO96011 259 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 MMP2P08253 660 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 HOXC13P31276 330 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 CAPGP40121 348 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 EFEMP1Q12805 493 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 TSNQ15631 228 aaKnown RBP15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 RBBP7Q16576 425 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 PAQR3Q6TCH7 311 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 CROCCP3Q8IVE0 287 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 TMEM125Q96AQ2 219 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 OSER1Q9NX31 292 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 TUBA8Q9NY65 449 aaPredicted RBP15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 SUN2Q9UH99 717 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 PTBP2Q9UKA9 531 aaKnown RBP15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 NYNRINQ9P2P1 1898 aaKnown RBP15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 SH3PXD2BA1X283 911 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 ENPP3O14638 875 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 TNPO2O14787 897 aaKnown RBP15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 TBX18O95935 607 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 CYBBP04839 570 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 CD247P20963 164 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 FDXRP22570 491 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 AGTR2P50052 363 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 KANK2Q63ZY3 851 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 ING2Q9H160 280 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 RPF2Q9H7B2 306 aaKnown RBP15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 TBC1D23Q9NUY8 699 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 INTS7Q9NVH2 962 aaKnown RBP15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 DOCK3Q8IZD9 2030 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 MROH6A6NGR9 719 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 BOLA2-SMG1P6H3BVE0 249 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 ACOX3O15254 700 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 PAPSS2O95340 614 aaPredicted RBP15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 GPIP06744 558 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 HMOX2P30519 316 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 RFC2P35250 354 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 TRAF2Q12933 501 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 LCP2Q13094 533 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 FSCN1Q16658 493 aaKnown RBP15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 DDR2Q16832 855 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 RAP1GAP2Q684P5 730 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 C16orf87Q6PH81 154 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 ELMSAN1Q6PJG2 1045 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 PHYKPLQ8IUZ5 450 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 THEM5Q8N1Q8 247 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 LRRC43Q8N309 656 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 BRI3BPQ8WY22 251 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 PLEKHG4BQ96PX9 1271 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 ASB2Q96Q27 587 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 CATSPERZQ9NTU4 200 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 DOLKQ9UPQ8 538 aa15.09■□□□□ 0.01
SEMA3B-203ENST00000419007 A0A1W2PP18 115 aa15.08■□□□□ 0
SEMA3B-203ENST00000419007 CDC7O00311 574 aa15.08■□□□□ 0
SEMA3B-203ENST00000419007 ALBP02768 609 aa15.08■□□□□ 0
SEMA3B-203ENST00000419007 FGF4P08620 206 aa15.08■□□□□ 0
SEMA3B-203ENST00000419007 FCGR1AP12314 374 aa15.08■□□□□ 0
SEMA3B-203ENST00000419007 MAP4P27816 1152 aaKnown RBP15.08■□□□□ 0
SEMA3B-203ENST00000419007 ELK4P28324 431 aa15.08■□□□□ 0
SEMA3B-203ENST00000419007 ANKS6Q68DC2 871 aa15.08■□□□□ 0
SEMA3B-203ENST00000419007 PGBD5Q8N414 524 aa15.08■□□□□ 0
SEMA3B-203ENST00000419007 SMYD1Q8NB12 490 aa15.08■□□□□ 0
SEMA3B-203ENST00000419007 FAM210AQ96ND0 272 aa15.08■□□□□ 0
SEMA3B-203ENST00000419007 SERPINB11Q96P15 392 aa15.08■□□□□ 0
SEMA3B-203ENST00000419007 ZYG11BQ9C0D3 744 aa15.08■□□□□ 0
SEMA3B-203ENST00000419007 ADNPQ9H2P0 1102 aa15.08■□□□□ 0
SEMA3B-203ENST00000419007 PCDHA9Q9Y5H5 950 aa15.08■□□□□ 0
SEMA3B-203ENST00000419007 UNCXA6NJT0 531 aa15.08■□□□□ 0
SEMA3B-203ENST00000419007 CPT1AP50416 773 aa15.08■□□□□ 0
SEMA3B-203ENST00000419007 TBX4P57082 545 aa15.08■□□□□ 0
SEMA3B-203ENST00000419007 MRPS6P82932 125 aaKnown RBP15.08■□□□□ 0
SEMA3B-203ENST00000419007 NFKB2Q00653 900 aa15.08■□□□□ 0
SEMA3B-203ENST00000419007 CCL14Q16627 93 aa15.08■□□□□ 0
SEMA3B-203ENST00000419007 SLC39A12Q504Y0 691 aa15.08■□□□□ 0
SEMA3B-203ENST00000419007 CYBRD1Q53TN4 286 aa15.08■□□□□ 0
SEMA3B-203ENST00000419007 C2orf69Q8N8R5 385 aa15.08■□□□□ 0
SEMA3B-203ENST00000419007 RPRD1AQ96P16 312 aaPredicted RBP15.08■□□□□ 0
SEMA3B-203ENST00000419007 CHID1Q9BWS9 393 aa15.08■□□□□ 0
SEMA3B-203ENST00000419007 ZFYVE28Q9HCC9 887 aa15.08■□□□□ 0
SEMA3B-203ENST00000419007 OAS3Q9Y6K5 1087 aaKnown RBP15.08■□□□□ 0
SEMA3B-203ENST00000419007 BTN3A1O00481 513 aa15.07■□□□□ 0
SEMA3B-203ENST00000419007 SNX2O60749 519 aa15.07■□□□□ 0
SEMA3B-203ENST00000419007 CHEK2O96017 543 aa15.07■□□□□ 0
SEMA3B-203ENST00000419007 ZNF182P17025 639 aaPredicted RBP15.07■□□□□ 0
SEMA3B-203ENST00000419007 RPL9P32969 192 aaKnown RBP15.07■□□□□ 0
SEMA3B-203ENST00000419007 SLC26A3P40879 764 aa15.07■□□□□ 0
SEMA3B-203ENST00000419007 GPR15P49685 360 aa15.07■□□□□ 0
SEMA3B-203ENST00000419007 HUNKP57058 714 aa15.07■□□□□ 0
SEMA3B-203ENST00000419007 EIF4EBP2Q13542 120 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms