RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 MARK3P27448 753 aa4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 UBA7P41226 1012 aa4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 FASLGP48023 281 aa4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 GRIK2Q13002 908 aa4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 CDC16Q13042 620 aa4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 NSUN5P2Q63ZY6 315 aa4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 C18orf63Q68DL7 685 aa4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 NCEH1Q6PIU2 408 aa4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 GSTA5Q7RTV2 222 aa4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 TBC1D1Q86TI0 1168 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 ARHGAP12Q8IWW6 846 aa4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 RNF113BQ8IZP6 322 aaKnown RBP4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 MAGEC3Q8TD91 643 aa4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 PIGTQ969N2 578 aa4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 MUC13Q9H3R2 512 aa4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 OLA1Q9NTK5 396 aaKnown RBP4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 MTMR10Q9NXD2 777 aa4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 KLHL20Q9Y2M5 609 aa4.33□□□□□ -1.72
HMGB1P49-201ENST00000418882 H3BQ06 376 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 JRKO75564 520 aa4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 WISP2O76076 250 aa4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 HSPA1AP0DMV8 641 aaKnown RBP4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 HSPA1BP0DMV9 641 aaKnown RBP4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 RARGP13631 454 aa4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 UBA1P22314 1058 aaKnown RBP4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 KCNA5P22460 613 aa4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 POU3F1Q03052 451 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 NIPAL4Q0D2K0 466 aa4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 RBBP5Q15291 538 aaKnown RBP4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 SOWAHCQ53LP3 525 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 DCST1Q5T197 706 aa4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 SDCCAG8Q86SQ7 713 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 KMT5CQ86Y97 462 aa4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 ADSSL1Q8N142 457 aa4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 HJURPQ8NCD3 748 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 C1orf74Q96LT6 269 aa4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 INPP4AQ96PE3 977 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 SMC6Q96SB8 1091 aa4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 ZFP57Q9NU63 452 aa4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 ZNF69Q9UC07 566 aa4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 OR14J1Q9UGF5 321 aa4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 FBXL2Q9UKC9 423 aa4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 CORO1CQ9ULV4 474 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 DLGAP4Q9Y2H0 992 aa4.32□□□□□ -1.72
HMGB1P49-201ENST00000418882 A0A087X0M5 115 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 A0A1B0GX30 115 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 ASPDHA6ND91 283 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 C5orf60A6NFR6 353 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 PGPEP1LA6NFU8 196 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 ANKRD28O15084 1053 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 GRID2O43424 1007 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 HCRTR2O43614 444 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 LMX1BO60663 402 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 SLC25A12O75746 678 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 PLGP00747 810 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 LAMP2P13473 410 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 NR1D1P20393 614 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 UGT1A1P22309 533 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 NFKBIAP25963 317 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 USP8P40818 1118 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 TAS2R40P59535 323 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 DCAF7P61962 342 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 COG7P83436 770 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 TROAPQ12815 778 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 ZNF234Q14588 700 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 KRTCAP3Q53RY4 240 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 C9orf50Q5SZB4 431 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 STPG1Q5TH74 334 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 GKAP1Q5VSY0 366 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 TMEM198Q66K66 360 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 PAPD4Q6PIY7 484 aaKnown RBP4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 DSTYKQ6XUX3 929 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 C1orf122Q6ZSJ8 110 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 MARK2Q7KZI7 788 aaKnown RBP4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 EXOC3L1Q86VI1 746 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 MAB21L3Q8N8X9 362 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 IL17RCQ8NAC3 791 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 OR1J2Q8NGS2 313 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 ARHGEF2Q92974 986 aaKnown RBP4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 CDCA5Q96FF9 252 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 ELMOD3Q96FG2 381 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 SYT17Q9BSW7 474 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 POLR3GLQ9BT43 218 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 TCF7L2Q9NQB0 619 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 SETD4Q9NVD3 440 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 KLHL9Q9P2J3 617 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 R3HDM2Q9Y2K5 976 aaKnown RBP4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 RUSC2Q8N2Y8 1516 aa4.31□□□□□ -1.72
HMGB1P49-201ENST00000418882 TDRD9Q8NDG6 1382 aaKnown RBP4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 CTAGE9A4FU28 777 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 PLPP2O43688 288 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 RNASEH2AO75792 299 aaKnown RBP4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 CCNDBP1O95273 360 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 OR2C1O95371 312 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 CTAGE8P0CG41 777 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 PSMA4P25789 261 aaKnown RBP4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 ACADLP28330 430 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 TM4SF1P30408 202 aa4.3□□□□□ -1.72
HMGB1P49-201ENST00000418882 GNL1P36915 607 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms