RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 SNX20Q7Z614 316 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 SPRED2Q7Z698 418 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 CUZD1Q86UP6 607 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 ZSWIM9Q86XI8 627 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 PELI3Q8N2H9 469 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 AFAP1L2Q8N4X5 818 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 CCNYL1Q8N7R7 359 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 GIMAP7Q8NHV1 300 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 CD200R1Q8TD46 325 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 BHMTQ93088 406 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 GPR21Q99679 349 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 UNKQ9C0B0 810 aaKnown RBP9□□□□□ -0.97
LINCMD1-201ENST00000418518 SUV39H2Q9H5I1 410 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 MEAF6Q9HAF1 191 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 ZFYVE1Q9HBF4 777 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9□□□□□ -0.97
LINCMD1-201ENST00000418518 NFKBIL1Q9UBC1 381 aaPredicted RBP9□□□□□ -0.97
LINCMD1-201ENST00000418518 TRMT6Q9UJA5 497 aaKnown RBP9□□□□□ -0.97
LINCMD1-201ENST00000418518 APPL1Q9UKG1 709 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 CDYLQ9Y232 598 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 STK38LQ9Y2H1 464 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 SLC30A1Q9Y6M5 507 aa9□□□□□ -0.97
LINCMD1-201ENST00000418518 IGLV3-16A0A075B6K0 115 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 C1orf232A0A0U1RR37 186 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 GOLGA8CPA6NN73 597 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 SYCE1LA8MT33 242 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 B2RBV5 119 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 HOXC11O43248 304 aaPredicted RBP8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 PEX11AO75192 247 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 TM7SF2O76062 418 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 POP4O95707 220 aaKnown RBP8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 FGF4P08620 206 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 HSPA1AP0DMV8 641 aaKnown RBP8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 HSPA1BP0DMV9 641 aaKnown RBP8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 TYRP14679 529 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 BPIP17213 487 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 CEBPBP17676 345 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 CTPS1P17812 591 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 GM2AP17900 193 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 CCND1P24385 295 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 FMO4P31512 558 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 HNF1BP35680 557 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 SPAM1P38567 509 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 STK19P49842 368 aaPredicted RBP8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 CLCN7P51798 805 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 CCNHP51946 323 aaPredicted RBP8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 COPAP53621 1224 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 NFATC2Q13469 925 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 PTPRRQ15256 657 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 CARD16Q5EG05 197 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 ZRANB3Q5FWF4 1079 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 ZDHHC20Q5W0Z9 365 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 GRAMD4Q6IC98 578 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 UGT3A1Q6NUS8 523 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 ADIPOR2Q86V24 386 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 SPNS2Q8IVW8 549 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 RBFAQ8N0V3 343 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 AHI1Q8N157 1196 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 PHTF2Q8N3S3 785 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 ENDOVQ8N8Q3 282 aaKnown RBP8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 STAG3L4Q8TBR4 150 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 DTX3LQ8TDB6 740 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 WFIKKN2Q8TEU8 576 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 AGAP11Q8TF27 550 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 FUBP1Q96AE4 644 aaKnown RBP8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 CMTM5Q96DZ9 223 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 MOCOSQ96EN8 888 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 SGF29Q96ES7 293 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 SCRN2Q96FV2 425 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 SLC30A3Q99726 388 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 BBS2Q9BXC9 721 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 TNKS2Q9H2K2 1166 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 CYP4F12Q9HCS2 524 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 BPIFA1Q9NP55 256 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 LATS2Q9NRM7 1088 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 KLHL42Q9P2K6 505 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 BAIAP2L1Q9UHR4 511 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 IKZF3Q9UKT9 509 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 DHRS7Q9Y394 339 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 HCFC2Q9Y5Z7 792 aa8.99□□□□□ -0.97
LINCMD1-201ENST00000418518 GOLGA8QA0A0J9YX86 632 aa8.98□□□□□ -0.97
LINCMD1-201ENST00000418518 GOLGA8OA6NCC3 632 aa8.98□□□□□ -0.97
LINCMD1-201ENST00000418518 E9PBE3 544 aa8.98□□□□□ -0.97
LINCMD1-201ENST00000418518 NEDD8-MDP1E9PL57 170 aa8.98□□□□□ -0.97
LINCMD1-201ENST00000418518 GOLGA8NF8WBI6 632 aa8.98□□□□□ -0.97
LINCMD1-201ENST00000418518 UBXN8O00124 270 aa8.98□□□□□ -0.97
LINCMD1-201ENST00000418518 DCXO43602 365 aa8.98□□□□□ -0.97
LINCMD1-201ENST00000418518 OR1I1O60431 355 aa8.98□□□□□ -0.97
LINCMD1-201ENST00000418518 KLHL41O60662 606 aa8.98□□□□□ -0.97
LINCMD1-201ENST00000418518 NIPSNAP2O75323 286 aa8.98□□□□□ -0.97
LINCMD1-201ENST00000418518 ECI2O75521 394 aa8.98□□□□□ -0.97
LINCMD1-201ENST00000418518 CDK14O94921 469 aa8.98□□□□□ -0.97
LINCMD1-201ENST00000418518 PRAMEF1O95521 474 aa8.98□□□□□ -0.97
LINCMD1-201ENST00000418518 ASLP04424 464 aa8.98□□□□□ -0.97
LINCMD1-201ENST00000418518 JUNP05412 331 aaKnown RBP8.98□□□□□ -0.97
LINCMD1-201ENST00000418518 COX4I1P13073 169 aa8.98□□□□□ -0.97
LINCMD1-201ENST00000418518 ZNF7P17097 686 aaPredicted RBP8.98□□□□□ -0.97
LINCMD1-201ENST00000418518 ACRV1P26436 265 aa8.98□□□□□ -0.97
LINCMD1-201ENST00000418518 PIK3R1P27986 724 aa8.98□□□□□ -0.97
LINCMD1-201ENST00000418518 EPHA3P29320 983 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms