RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 TMX2-CTNND1H3BSU7 103 aa15.2■□□□□ 0.02
NUP50-204ENST00000417702 RRP8O43159 456 aaKnown RBP15.2■□□□□ 0.02
NUP50-204ENST00000417702 ZW10O43264 779 aa15.2■□□□□ 0.02
NUP50-204ENST00000417702 STK10O94804 968 aaKnown RBP15.2■□□□□ 0.02
NUP50-204ENST00000417702 EPOP01588 193 aa15.2■□□□□ 0.02
NUP50-204ENST00000417702 ATP1A1P05023 1023 aaKnown RBP15.2■□□□□ 0.02
NUP50-204ENST00000417702 FGF1P05230 155 aa15.2■□□□□ 0.02
NUP50-204ENST00000417702 RBMS1P29558 406 aaKnown RBP15.2■□□□□ 0.02
NUP50-204ENST00000417702 DCDC1P59894 354 aa15.2■□□□□ 0.02
NUP50-204ENST00000417702 OTUD4Q01804 1114 aaKnown RBP15.2■□□□□ 0.02
NUP50-204ENST00000417702 MPP3Q13368 585 aa15.2■□□□□ 0.02
NUP50-204ENST00000417702 C3orf38Q5JPI3 329 aa15.2■□□□□ 0.02
NUP50-204ENST00000417702 ZNF569Q5MCW4 686 aa15.2■□□□□ 0.02
NUP50-204ENST00000417702 ITPRIPL1Q6GPH6 555 aa15.2■□□□□ 0.02
NUP50-204ENST00000417702 C19orf48Q6RUI8 117 aa15.2■□□□□ 0.02
NUP50-204ENST00000417702 KDELC1Q6UW63 502 aa15.2■□□□□ 0.02
NUP50-204ENST00000417702 CDKL3Q8IVW4 592 aaPredicted RBP15.2■□□□□ 0.02
NUP50-204ENST00000417702 SFTPA2Q8IWL1 248 aa15.2■□□□□ 0.02
NUP50-204ENST00000417702 SNIP1Q8TAD8 396 aaKnown RBP15.2■□□□□ 0.02
NUP50-204ENST00000417702 HNRNPLLQ8WVV9 542 aaKnown RBP15.2■□□□□ 0.02
NUP50-204ENST00000417702 EID2BQ96D98 161 aa15.2■□□□□ 0.02
NUP50-204ENST00000417702 ZNF578Q96N58 590 aaPredicted RBP15.2■□□□□ 0.02
NUP50-204ENST00000417702 DESI2Q9BSY9 194 aa15.2■□□□□ 0.02
NUP50-204ENST00000417702 ZSCAN5AQ9BUG6 496 aa15.2■□□□□ 0.02
NUP50-204ENST00000417702 RMI1Q9H9A7 625 aa15.2■□□□□ 0.02
NUP50-204ENST00000417702 CNOT6Q9ULM6 557 aaKnown RBP15.2■□□□□ 0.02
NUP50-204ENST00000417702 LHX6Q9UPM6 363 aa15.2■□□□□ 0.02
NUP50-204ENST00000417702 SATB2Q9UPW6 733 aa15.2■□□□□ 0.02
NUP50-204ENST00000417702 LOC285095A0A1B0GVY8 99 aa15.19■□□□□ 0.02
NUP50-204ENST00000417702 A0A1W2PQM1 296 aa15.19■□□□□ 0.02
NUP50-204ENST00000417702 MIF4GDA9UHW6 222 aaKnown RBP15.19■□□□□ 0.02
NUP50-204ENST00000417702 D6RAR5 112 aa15.19■□□□□ 0.02
NUP50-204ENST00000417702 F5H423 210 aaPredicted RBP15.19■□□□□ 0.02
NUP50-204ENST00000417702 TLX3O43711 291 aaPredicted RBP15.19■□□□□ 0.02
NUP50-204ENST00000417702 ZNF189O75820 626 aaPredicted RBP15.19■□□□□ 0.02
NUP50-204ENST00000417702 DXOO77932 396 aaKnown RBP15.19■□□□□ 0.02
NUP50-204ENST00000417702 ECEL1O95672 775 aa15.19■□□□□ 0.02
NUP50-204ENST00000417702 RBL1P28749 1068 aa15.19■□□□□ 0.02
NUP50-204ENST00000417702 EIF2S3P41091 472 aaKnown RBP15.19■□□□□ 0.02
NUP50-204ENST00000417702 MAZP56270 477 aaKnown RBP15.19■□□□□ 0.02
NUP50-204ENST00000417702 EIF3EP60228 445 aaKnown RBP15.19■□□□□ 0.02
NUP50-204ENST00000417702 PDPK2PQ6A1A2 396 aa15.19■□□□□ 0.02
NUP50-204ENST00000417702 DARS2Q6PI48 645 aaKnown RBP15.19■□□□□ 0.02
NUP50-204ENST00000417702 SPRED1Q7Z699 444 aa15.19■□□□□ 0.02
NUP50-204ENST00000417702 C17orf82Q86X59 251 aaPredicted RBP15.19■□□□□ 0.02
NUP50-204ENST00000417702 ARL14Q8N4G2 192 aa15.19■□□□□ 0.02
NUP50-204ENST00000417702 SLC25A41Q8N5S1 370 aa15.19■□□□□ 0.02
NUP50-204ENST00000417702 TRAM1L1Q8N609 369 aa15.19■□□□□ 0.02
NUP50-204ENST00000417702 GPR26Q8NDV2 337 aa15.19■□□□□ 0.02
NUP50-204ENST00000417702 IPMKQ8NFU5 416 aa15.19■□□□□ 0.02
NUP50-204ENST00000417702 WDR36Q8NI36 951 aaKnown RBP15.19■□□□□ 0.02
NUP50-204ENST00000417702 ALG3Q92685 438 aa15.19■□□□□ 0.02
NUP50-204ENST00000417702 TMEM74Q96NL1 305 aa15.19■□□□□ 0.02
NUP50-204ENST00000417702 FSD1LQ9BXM9 530 aa15.19■□□□□ 0.02
NUP50-204ENST00000417702 STRADBQ9C0K7 418 aa15.19■□□□□ 0.02
NUP50-204ENST00000417702 TRABDQ9H4I3 376 aa15.19■□□□□ 0.02
NUP50-204ENST00000417702 THSD1Q9NS62 852 aa15.19■□□□□ 0.02
NUP50-204ENST00000417702 HACD3Q9P035 362 aa15.19■□□□□ 0.02
NUP50-204ENST00000417702 NFKBIL1Q9UBC1 381 aaPredicted RBP15.19■□□□□ 0.02
NUP50-204ENST00000417702 TRIM10Q9UDY6 481 aa15.19■□□□□ 0.02
NUP50-204ENST00000417702 PLEKHM1Q9Y4G2 1056 aa15.19■□□□□ 0.02
NUP50-204ENST00000417702 OAS3Q9Y6K5 1087 aaKnown RBP15.19■□□□□ 0.02
NUP50-204ENST00000417702 CCDC187A0A096LP49 1063 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 GOLGA6L9A6NEM1 432 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 CASC3O15234 703 aaKnown RBP15.18■□□□□ 0.02
NUP50-204ENST00000417702 DNAJC6O75061 913 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 ANXA9O76027 345 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 SLC25A14O95258 325 aaPredicted RBP15.18■□□□□ 0.02
NUP50-204ENST00000417702 RBP3P10745 1247 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 PYGMP11217 842 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 HLA-DPA1P20036 260 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 ABCG1P45844 678 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 GEMP55040 296 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 INHBCP55103 352 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 ERVPABLB-1P60509 514 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 COL28A1Q2UY09 1125 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 SIRPB2Q5JXA9 342 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 ZDHHC20Q5W0Z9 365 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 FOXR1Q6PIV2 292 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 NAGSQ8N159 534 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 OXNAD1Q96HP4 312 aaPredicted RBP15.18■□□□□ 0.02
NUP50-204ENST00000417702 MRGPRX2Q96LB1 330 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 HERPUD2Q9BSE4 406 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 GBA3Q9H227 469 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 CARD9Q9H257 536 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 C10orf88Q9H8K7 445 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 EPB41L5Q9HCM4 733 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 TRIM39Q9HCM9 518 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 PCDHGA8Q9Y5G5 932 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 SPO11Q9Y5K1 396 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 ST14Q9Y5Y6 855 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 ZFYVE26Q68DK2 2539 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 CHD6Q8TD26 2715 aa15.18■□□□□ 0.02
NUP50-204ENST00000417702 GPR89AB7ZAQ6 455 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 AURKAO14965 403 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 KCNN4O15554 427 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 NUAK1O60285 661 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 FTCDO95954 541 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 GPR89BP0CG08 455 aa15.17■□□□□ 0.02
NUP50-204ENST00000417702 BPIP17213 487 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms