RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 ZNF106Q9H2Y7 1883 aaKnown RBP16.69■□□□□ 0.26
SSBP3-205ENST00000417664 TSPAN11A1L157 253 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 NPIPB15A6NHN6 443 aaPredicted RBP16.69■□□□□ 0.26
SSBP3-205ENST00000417664 AGAP14A8MT82 685 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 MATN2O00339 956 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 GAPDHSO14556 408 aaPredicted RBP16.69■□□□□ 0.26
SSBP3-205ENST00000417664 HDAC3O15379 428 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 BNIP3LO60238 219 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 UGT2B4P06133 528 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 T-ENOLP0DO92 83 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 BPIP17213 487 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 IMPDH1P20839 514 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 VIPR2P41587 438 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 IDH3AP50213 366 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 ST8SIA6P61647 398 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 EIF4HQ15056 248 aaKnown RBP16.69■□□□□ 0.26
SSBP3-205ENST00000417664 RARS2Q5T160 578 aaKnown RBP16.69■□□□□ 0.26
SSBP3-205ENST00000417664 PAQR3Q6TCH7 311 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 RSPRY1Q96DX4 576 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 FAR2Q96K12 515 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 PLEKHG4BQ96PX9 1271 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 ASB2Q96Q27 587 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 TMEM237Q96Q45 408 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 GPR21Q99679 349 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 NMUR2Q9GZQ4 415 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 CLPBQ9H078 707 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 ASB8Q9H765 288 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 BRD9Q9H8M2 597 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 TMCO1Q9UM00 188 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 FAM50BQ9Y247 325 aa16.69■□□□□ 0.26
SSBP3-205ENST00000417664 SYCE1LA8MT33 242 aa16.68■□□□□ 0.26
SSBP3-205ENST00000417664 E5RI56 91 aa16.68■□□□□ 0.26
SSBP3-205ENST00000417664 ZBTB14O43829 449 aa16.68■□□□□ 0.26
SSBP3-205ENST00000417664 KERAO60938 352 aa16.68■□□□□ 0.26
SSBP3-205ENST00000417664 TULP3O75386 442 aa16.68■□□□□ 0.26
SSBP3-205ENST00000417664 CYP2A6P11509 494 aaPredicted RBP16.68■□□□□ 0.26
SSBP3-205ENST00000417664 CALB2P22676 271 aa16.68■□□□□ 0.26
SSBP3-205ENST00000417664 SETMARQ53H47 684 aaPredicted RBP16.68■□□□□ 0.26
SSBP3-205ENST00000417664 CTSL3PQ5NE16 218 aa16.68■□□□□ 0.26
SSBP3-205ENST00000417664 SEL1L3Q68CR1 1132 aa16.68■□□□□ 0.26
SSBP3-205ENST00000417664 EPGNQ6UW88 154 aa16.68■□□□□ 0.26
SSBP3-205ENST00000417664 FAM151BQ6UXP7 276 aa16.68■□□□□ 0.26
SSBP3-205ENST00000417664 RAB44Q7Z6P3 723 aaPredicted RBP16.68■□□□□ 0.26
SSBP3-205ENST00000417664 ALYREFQ86V81 257 aaKnown RBP16.68■□□□□ 0.26
SSBP3-205ENST00000417664 SERPINA9Q86WD7 417 aa16.68■□□□□ 0.26
SSBP3-205ENST00000417664 AFAP1L2Q8N4X5 818 aa16.68■□□□□ 0.26
SSBP3-205ENST00000417664 CCNYL1Q8N7R7 359 aa16.68■□□□□ 0.26
SSBP3-205ENST00000417664 PTERQ96BW5 349 aa16.68■□□□□ 0.26
SSBP3-205ENST00000417664 SGF29Q96ES7 293 aa16.68■□□□□ 0.26
SSBP3-205ENST00000417664 PDLIM5Q96HC4 596 aaKnown RBP16.68■□□□□ 0.26
SSBP3-205ENST00000417664 NSL1Q96IY1 281 aa16.68■□□□□ 0.26
SSBP3-205ENST00000417664 UNKQ9C0B0 810 aaKnown RBP16.68■□□□□ 0.26
SSBP3-205ENST00000417664 CIPCQ9C0C6 399 aa16.68■□□□□ 0.26
SSBP3-205ENST00000417664 COG4Q9H9E3 785 aa16.68■□□□□ 0.26
SSBP3-205ENST00000417664 DKK3Q9UBP4 350 aa16.68■□□□□ 0.26
SSBP3-205ENST00000417664 GNPTGQ9UJJ9 305 aa16.68■□□□□ 0.26
SSBP3-205ENST00000417664 FNDC3AQ9Y2H6 1198 aaKnown RBP16.68■□□□□ 0.26
SSBP3-205ENST00000417664 CHD9Q3L8U1 2897 aa16.68■□□□□ 0.26
SSBP3-205ENST00000417664 HEPACAM2A8MVW5 462 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 OR1I1O60431 355 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 CHRNGP07510 517 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 NQO1P15559 274 aaKnown RBP16.67■□□□□ 0.26
SSBP3-205ENST00000417664 CHRM3P20309 590 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 ACRV1P26436 265 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 TARSP26639 723 aaKnown RBP16.67■□□□□ 0.26
SSBP3-205ENST00000417664 IL2P60568 153 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 TUBB3Q13509 450 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 CRY1Q16526 586 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 LRRC66Q68CR7 880 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 LSMEM2Q8N112 164 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 CHST14Q8NCH0 376 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 DTX3LQ8TDB6 740 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 ULK4Q96C45 1275 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 KLHL32Q96NJ5 620 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 RAB3IPQ96QF0 476 aaPredicted RBP16.67■□□□□ 0.26
SSBP3-205ENST00000417664 ATOH8Q96SQ7 321 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 FAM83CQ9BQN1 747 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 EBF4Q9BQW3 602 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 RASSF4Q9H2L5 321 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 RAD18Q9NS91 495 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 ELOVL2Q9NXB9 296 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 DEC1Q9P2X7 70 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 PLA2G4CQ9UP65 541 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 DHRS7Q9Y394 339 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 NUMBLQ9Y6R0 609 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 WASF2Q9Y6W5 498 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 SCN8AQ9UQD0 1980 aa16.67■□□□□ 0.26
SSBP3-205ENST00000417664 C2orf16Q68DN1 1984 aa16.66■□□□□ 0.26
SSBP3-205ENST00000417664 A0A0U1RQS6 177 aa16.66■□□□□ 0.26
SSBP3-205ENST00000417664 CAPN14A8MX76 684 aa16.66■□□□□ 0.26
SSBP3-205ENST00000417664 PTPN4P29074 926 aa16.66■□□□□ 0.26
SSBP3-205ENST00000417664 HERVK_113P63132 956 aa16.66■□□□□ 0.26
SSBP3-205ENST00000417664 PTSQ03393 145 aa16.66■□□□□ 0.26
SSBP3-205ENST00000417664 TRIM68Q6AZZ1 485 aa16.66■□□□□ 0.26
SSBP3-205ENST00000417664 FRMD7Q6ZUT3 714 aa16.66■□□□□ 0.26
SSBP3-205ENST00000417664 MAVSQ7Z434 540 aa16.66■□□□□ 0.26
SSBP3-205ENST00000417664 TSPAN33Q86UF1 283 aa16.66■□□□□ 0.26
SSBP3-205ENST00000417664 CD200R1Q8TD46 325 aa16.66■□□□□ 0.26
SSBP3-205ENST00000417664 CYB5D2Q8WUJ1 264 aa16.66■□□□□ 0.26
SSBP3-205ENST00000417664 PBXIP1Q96AQ6 731 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms